Parus major (Great Tit): 107212364
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Entry
107212364 CDS
T04864
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107212364 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107212364 (DDX5)
03009 Ribosome biogenesis [BR:
pmaj03009
]
107212364 (DDX5)
Enzymes [BR:
pmaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107212364 (DDX5)
Spliceosome [BR:
pmaj03041
]
Complex A
U1 snRNP components
U1 related factors
107212364 (DDX5)
Complex B
107212364 (DDX5)
Ribosome biogenesis [BR:
pmaj03009
]
Eukaryotic type
Pre-60S particles
Helicases
107212364 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
107212364
NCBI-ProteinID:
XP_015500986
Ensembl:
ENSPMJG00000017312
LinkDB
All DBs
Position
18:3529832..3537195
Genome browser
AA seq
604 aa
AA seq
DB search
MPGYSSDRDRGFGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPD
VVRRTAQEVEQYRASKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQG
WPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQ
QVAAEYSRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTY
LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGA
LELSANHNILQIVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRD
GWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSED
YIHRIGRTARSTKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSR
GDRRDRYSAGKRGGFSSFRERENFERTYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGF
AAAGMQAGFRAGGNPAGAYQNGYEQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPT
SYSQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggtattccagcgacagggatagagggtttggagcccctcgttttggaggaagt
agaggtggacctctctctgggaagaaatttggaaaccctggggagaaacttacaaaaaag
aaatggaacttggatgagctgcccaaatttgagaagaacttttaccaagaacatccggat
gtagttagacgtactgcgcaagaagttgaacagtacagagcgagcaaagaggtcacagtt
aggggccataactgtccaaaaccaattatcaacttttatgaagcaaacttccctgcaaac
gttatggaagtaattcagaggcagaacttcactgaaccaactgctattcaagcccaaggt
tggcctgttgcattgagtggattggatatggttggagtggcacagactggatcagggaaa
acactctcttacttactgcctgccattgtgcatataaatcatcagccattcctggagcga
ggggatggacctatttgtcttgtgttggcaccaacccgtgaactggcccaacaagtgcag
caggtagctgctgaatacagcagagcatgtcgtttgaagtccacgtgtatttatggaggt
gctccaaagggaccacaaatccgtgacctggaaagaggtgtggaaatctgcattgcaaca
cctggaagacttatagacttcttagaagctggaaaaaccaatctcaggaggtgtacttac
cttgtccttgatgaagctgacaggatgcttgacatgggatttgaacctcagatcagaaaa
attgtggatcagataagacctgataggcagactctgatgtggagtgctacatggcctaag
gaagtgaggcagctggctgaagatttcttgaaagaatatgtgcacatcaacatcggtgca
ctggaattaagtgcaaaccacaacattcttcagattgtggatgtgtgtcatgatgtagag
aaagatgacaagcttattcgtttgatggaagaaatcatgagtgagaaagaaaacaaaaca
atcgtttttgtggaaaccaaaaggcgttgtgatgatcttaccagaaagatgaggagagat
gggtggccagcgatgggtattcacggtgataaaagtcagcaggaacgggactgggttcta
aatgaattcaaacacggaaaagcaccaatcctgattgctacagatgttgcatccagaggt
ctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaactcctcagaggac
tatatccaccgaattggacgaactgcccgcagtaccaaaacaggcacagcatacacattc
tttactcctaacaatattaagcaagtaaatgacctcatctctgtgcttcgggaggctaat
caagccatcaaccccaaattgcttcagctgattgaagacagaggttcaggtcgttcccga
ggtgaccgacgtgacagatactctgcgggcaaaaggggtggatttagtagttttagagag
agggagaactttgagagaacctatggtgcgctaggcaagagagactttggagcaaaaacc
caaaacggggcttacagcgcccagagtttcagcaatggaactccctttgggaatggcttt
gcagctgcaggcatgcaggccggcttcagggccggcggtaaccccgcaggagcgtaccag
aacggctacgagcagcagtacggcagtaacattgccaacatgcacaatggcatgaaccag
cagcagtacgcctaccctgccactggtgctgctcctatgataggttaccccatgcccaca
agttattctcaataa
DBGET
integrated database retrieval system
