Parus major (Great Tit): 107212470
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Entry
107212470 CDS
T04864
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04136
Autophagy - other
pmaj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107212470 (WIPI1)
04136 Autophagy - other
107212470 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107212470 (WIPI1)
03029 Mitochondrial biogenesis [BR:
pmaj03029
]
107212470 (WIPI1)
Membrane trafficking [BR:
pmaj04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
107212470 (WIPI1)
Mitochondrial biogenesis [BR:
pmaj03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107212470 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_NWD2_C
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_RSE1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
BCAS3_WD40
EIF3I
DUF5711
Beta-prop_Vps41
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
107212470
NCBI-ProteinID:
XP_015501240
Ensembl:
ENSPMJG00000017116
LinkDB
All DBs
Position
18:2429762..2449579
Genome browser
AA seq
444 aa
AA seq
DB search
MEAAAEAPGAPAALSCFSYNQDCTSLAIGTTTGYRLFSLSSVEQLDQVHESNEIPDVYIV
ERLFSSSLVVVVSHAKPQQMNVYHFKKGTEICNYSYSSKILSIRLNRQRLVVCLEESIYI
HNIKDMKLLKTIMDTPPNTTGLCALSINHANSYLAYPGSATSGEIVLYDGNTLKTACTIP
AHDGPLAALAFNSTGSKLASASEKGTVIRVFSIPGGQKLYEFRRGMKRYVNISSLVFSMD
SQFLCASSNTETVHIFKLEHLTDSRPEEPPTWSGYMGKMFQAATNYLPAQVSGMMSQDRA
FATVRLNISGQRNICALSTIQKLPRLLVTTSDGHLYIYNLDPQDGGECVLIKNHSLLGSG
KMEENKENDLQPPVPQSYAATVARQSTVPSTSTMPGYSEDGGALRGEVIPEHEFATGPVC
LDDENEFPPIILCRGGQPGKAKRS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcggccgaggccccgggggcgcccgcggcgctcagctgcttctcctacaac
caggactgcacctccctggcaattggaaccacaactggatacagacttttctccttaagt
tctgtggagcaactggaccaggtccatgaaagcaatgaaatcccagatgtttacatcgtg
gagcgtctgttctccagcagccttgtggttgtggtcagccatgccaagccacagcaaatg
aatgtctaccacttcaagaaagggacagagatctgcaactacagctattccagtaaaatc
ctgtccatccggctgaaccggcagaggctggtggtctgcctggaagagtcaatttacatc
cataacatcaaggacatgaagcttttgaagactattatggacacacctcccaacacaaca
ggtctgtgtgctctctccatcaaccacgccaactcctacttggcttatcccggcagcgcg
accagcggagagatcgtgctttacgacggaaatactttgaaaacagcctgcaccattcct
gcccacgatgggcctctggccgctctcgccttcaactccaccggctccaagttggccagt
gcttctgaaaaaggcacagtcattcgtgtattttccattcctggggggcaaaaactctat
gaattccggcgagggatgaaaaggtatgtgaacatcagctccctggtgttcagcatggat
tcccagttcctctgtgcctccagcaacacagagaccgtgcacatcttcaaactggagcac
ctgacagacagccggccagaggagcctccaacctggagtggttacatgggaaagatgttc
caggctgctaccaactacctccctgcccaggtgtcgggcatgatgagccaggaccgagcc
tttgccaccgtccggctgaacatctccggacagaggaacatctgtgccctctccacgatt
cagaagctgcctcggctgttggtgacgacgtcggatggacatctctacatctataacctg
gacccgcaggatggaggggagtgtgtcttaattaaaaatcacagtctgcttggctcagga
aagatggaggagaacaaagaaaacgaccttcagcctccagtacctcaatcttatgcagca
actgtagccagacaaagtacagtgccttcaacttcgaccatgccaggttactcggaggat
ggtggagccctgcgtggggaggttatcccagagcacgagtttgcaactggaccagtctgt
ctggacgatgagaatgagtttcctcctataatcttgtgccgtggaggtcagccaggcaag
gcgaagaggtcgtga
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