Parus major (Great Tit): 107212561
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Entry
107212561 CDS
T04864
Symbol
RHBDL3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pmaj01002
]
107212561 (RHBDL3)
Enzymes [BR:
pmaj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
107212561 (RHBDL3)
Peptidases and inhibitors [BR:
pmaj01002
]
Serine peptidases
Family S54: Rhomboid family
107212561 (RHBDL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
DUF5580_M
EF-hand_8
EF-hand_11
AIF-1
EF-hand_9
EH
Motif
Other DBs
NCBI-GeneID:
107212561
NCBI-ProteinID:
XP_015501483
Ensembl:
ENSPMJG00000017730
LinkDB
All DBs
Position
18:complement(3723218..3784168)
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AA seq
407 aa
AA seq
DB search
MGDRLPEPHASSSPAVAASSEAEEIEVLDSEDVLPMAAEDHWKALFDQFDPDNTGYISTE
KFRSLLQRHGSELDPHKLEVLLALADSNSEGRICYQDFVNLMSNKRSNSFRQAILQGNRR
LCSKALLEETGLSLSQRLIRHVAYETLPREIDRKWYYDSYTCCPPPWFMITITIVEVAFF
LYNGVVLDRFVLQVSHPLYLKNALLYHPQLRAQAWRYLTYIFMHAGIEHLGLNVVLQLLV
GVPLEMVHGAARISFVYVAGVVAGSLAVSVADMRAPVVGSSGGVYALVSAHLANIVMNWS
GMKCQFKLLRMAVALICMSFEFGRAVWLRFHPSAYPPCPHPSFMAHLGGVMVGITLGVII
LRNYEQRLQDQTLWWIFLSIYVIFVLFAIFWNIFAYSLLDLKLPPPP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaggctgccggagcctcacgccagctcttcccctgctgtggctgccagctcg
gaggcggaagaaatcgaggtgctggactccgaggatgtcctacctatggccgcagaggat
cactggaaagccctatttgatcagtttgatcctgacaacactggctacatcagcactgag
aagtttcgctcccttctccagagacacggctcggagctggacccccacaagctggaggtc
ctgctagccctggcagacagcaactctgaggggaggatctgctaccaggacttcgtcaac
ctgatgagcaacaaaaggtccaacagtttccgccaagccatcctgcaggggaacaggagg
ctgtgcagcaaggctctgctggaggagacggggctgagcctctcacagaggctgatccgg
cacgtggcgtacgagaccctcccgcgggagatcgaccgcaagtggtactacgacagctac
acctgctgccccccgccctggttcatgatcaccatcactattgtagaggttgcctttttt
ctttacaatggagtggtcttagacagatttgtgctgcaagtcagccaccccttgtacctg
aagaatgcattgctgtaccatccccagcttcgggcccaggcttggaggtatctaacctac
atattcatgcatgcagggatagaacaccttgggctcaatgttgttcttcagctcttggtt
ggagttcctctggaaatggtgcacggagctgcgaggatcagttttgtgtacgttgcagga
gttgtggcagggtccctggcagtgtcagtggctgacatgagggcgccggtggtgggctcc
tctggaggtgtgtatgctcttgtctccgctcacctggccaatattgtgatgaactggtca
ggaatgaagtgccaattcaaactgctgcgcatggccgttgccttgatctgtatgagcttt
gaatttggaagagccgtttggctgcgattccacccctccgcttaccccccatgcccccac
cccagcttcatggctcacctgggaggggtgatggttggaatcacccttggtgtcatcatc
ctgaggaactatgagcagagactccaagatcagactttatggtggatcttcctttctatt
tacgtcatttttgtcttgtttgccatcttctggaatatttttgcctacagtctgttggat
ctgaagctacctccccctccttga
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