Parus major (Great Tit): 107212640
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Entry
107212640 CDS
T04864
Symbol
SOX9
Name
(RefSeq) transcription factor SOX-9
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107212640 (SOX9)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107212640 (SOX9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Collagen
Motif
Other DBs
NCBI-GeneID:
107212640
NCBI-ProteinID:
XP_015501631
Ensembl:
ENSPMJG00000017065
LinkDB
All DBs
Position
18:complement(1472242..1475820)
Genome browser
AA seq
484 aa
AA seq
DB search
MNLLDPFMKMTEEQDKCISDAPSPTMSDDSAGSPCPSGSGSDTENTRPQENTFPKGDPDL
KKENDEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK
SVKNGQAEQEEGAEQTHISPNAIFKALQADSPQSSSSISEVHSPGEHSGQSQGPPTPPTT
PKTDPQPSKQDLKREGRSLGEGGRQPPHIDFRDVDIGELSSDVISNIETFDVNEFDQYLP
PNGHPGQPGQVTYTGSYGISGAAGTPPAAGHVWMSKQQALSAEQGPQQQQQQQQRTHIKT
EQLSPSHYSEQQQHSPQQQQQQQQQQQQQQQQLGYGSFNLQHYSSSYPSISRAQYEYGEH
QGSSGSYYSHAGQGSGLYSTFSYMSPTQRPMYTPIADTAGVPSIPQTHSPQHWEQPVYTQ
LTRP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgaccctttcatgaaaatgacagaagaacaggacaaatgtatctccgac
gcccccagccccaccatgtcggatgactccgccgggtccccctgcccctctggatccggc
tcggacacggagaacaccagaccccaagagaacaccttccccaagggggacccggacctg
aagaaggagaacgacgaggacaaattcccggtgtgcatccgggaggcggtgagccaggtg
ctgaagggctacgactggaccctggtgccgatgccggtgcgggtgaacggctccagcaag
aacaaaccgcacgtcaagagacccatgaacgccttcatggtgtgggcacaggcggcccgc
aggaagctggcggatcagtacccgcacctgcacaacgccgagctcagcaagaccctgggc
aagctctggaggctgctgaacgagagcgagaagcgcccgttcgtggaggaggccgagcgg
ctgcgggtgcagcacaagaaggaccaccccgactacaaataccagccccggcggaggaag
tcggtgaagaacgggcaggcggagcaggaggagggcgcggagcagacccacatctccccc
aacgccatcttcaaggcgctgcaggcagactcgccccagtcctcctccagcatcagcgag
gtgcactcgcccggggagcactcgggccagtcccaggggccccccacgccccccaccacc
cccaagacggacccgcagccaagcaagcaggacctgaagcgcgagggccgctcgctgggc
gagggcggccggcagccgccgcacatcgacttccgcgacgtggacatcggcgagctgagc
agcgacgtgatctccaacatcgagaccttcgacgtcaacgagttcgaccagtacctgccg
cccaacgggcaccccgggcagcccggccaggtcacctacacgggcagctacggcatcagc
ggcgccgcgggcacgccgccggccgccggccacgtgtggatgtcgaagcagcaggcgctg
agcgcggagcaaggcccgcagcagcagcagcagcagcagcaaaggacgcacatcaagacg
gagcagctgagccccagccactacagcgagcagcagcagcactccccgcagcagcagcag
cagcagcagcagcagcagcagcagcagcagcagcagctgggctacggctccttcaacctg
cagcactacagctcgtcctaccccagcatcagccgcgctcagtacgagtacggcgagcac
cagggctcctcgggctcctactacagccacgccgggcagggcagcgggctctactccacc
ttcagctacatgagccccacgcagcgccccatgtacacccccatcgcagacacggcgggg
gtgccctccatcccccagacccacagcccgcagcactgggagcagcccgtctacacgcag
ctcacccggccctga
DBGET
integrated database retrieval system
