Parus major (Great Tit): 107212872
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Entry
107212872 CDS
T04864
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04142
Lysosome
pmaj04144
Endocytosis
pmaj05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107212872 (CLTC)
04142 Lysosome
107212872 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
107212872 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107212872 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmaj04147
]
107212872 (CLTC)
Membrane trafficking [BR:
pmaj04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
107212872 (CLTC)
Exosome [BR:
pmaj04147
]
Exosomal proteins
Proteins found in most exosomes
107212872 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
107212872
NCBI-ProteinID:
XP_015502166
Ensembl:
ENSPMJG00000019821
LinkDB
All DBs
Position
19:7150308..7180412
Genome browser
AA seq
1686 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQSDFPVAMQISDKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAQHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKDMYQEAKLTDQLPLII
VCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVV
RGQFSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRE
NPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELW
ASVLLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNS
VFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFD
VNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSS
YMEVVQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNA
HIQQVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEV
CFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGM
FTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAII
TMMNHPTDAWKEGQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLMVLSPRLDHTRAV
TFFTKVKQLPLVKPYLRSVQNHNNKSVNESLNNLFIIEEDYQALRTSIDAYDNFDNISLA
QRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQW
FLQENKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLTKVDAIKEK
VDKLDASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQP
GFGYSM
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccatccgcttccaggagcatctccagctccaaaatctgggcatc
aacccagcaaacattgggttcagcactctgacaatggagtctgacaaattcatctgcatc
agagagaaagtaggagaacaggctcaagtggtgatcattgacatgaatgaccccagcaac
ccaatccgaagaccaatttcagctgacagtgctatcatgaaccctgccagtaaagtcatt
gcattaaaagctgggaaaacgctgcaaatctttaacattgagatgaagagcaagatgaag
gctcacaccatgacagatgatgtcaccttctggaagtggatctctctgaacactgttgcc
cttgtgacggataatgcagtttaccactggagcatggagggggagtcccagcccgtgaag
atgtttgatcgccactccagccttgctggctgccagatcatcaactacaggactgatgcc
aagcagaaatggctcttgctgactggaatatctgcacagcaaaaccgtgtagtgggagca
atgcagctgtactctgtggacagaaaagtgtctcagcccatcgaggggcatgcagccagc
tttgcacagttcaagatggaagggaatgctgaagaatccactctcttctgttttgcagta
agagggcaagctgggggtaagctgcatatcattgaggttggcacaccacccactgggaat
cagccctttccaaagaaagccgtggatgtcttctttcctcctgaagcacaaagtgacttt
cctgttgctatgcagatcagtgacaagcacgatgttgtgttcctcataacaaaatatggc
tacatccacttgtatgacctggaaactggcacctgtatctacatgaacaggatcagtgga
gagaccatttttgttactgcacagcacgaagcaacagctggaattattggagtcaacaga
aagggacaagtgctctcagtgtgtgtggaagaagagaacatcattccctacatcacaaac
gtgctgcagaatcctgacctggctctaaggatggctgtccgcaacaacctggcgggggct
gaggagctctttgccaggaaattcaatacactcttcgcacaagggaactactcagaggca
gcaaaagtggcagctaatgccccaaagggaatcctgcgtactccagacaccatacgccgg
ttccagagtgttccagctcagccagggcagacttcccctctcctgcagtattttggcatt
ctgctggaccaagggcagctgaacaagtatgagtcactggagctctgcagaccagtgctc
cagcagggccgcaagcagctcttggaaaaatggttaaaagaagataagctggagtgctcg
gaggagctgggagaccttgtgaaatctgtagatcctacgctagcacttagtgtctatctg
agagccaacgttccaaacaaggtcatccagtgttttgctgaaacaggacaagtccagaag
attgttttgtatgctaagaaggtcggatatactccagactggatttttttgctgaggaat
gtaatgagaatcagccctgatcaaggacagcagtttgcacaaatgcttgttcaagatgaa
gagcctcttgcagatataacacagattgtggatgtctttatggaatataatttaatccag
caatgtacagcctttctgctggatgcactgaagaataatcgtccctcagaaggtcccctg
caaacacgtttacttgagatgaacctcatgcacgcgcctcaggttgcagatgccatcctg
ggaaaccaaatgtttactcactatgaccgggctcacatagctcagctgtgtgagaaggct
ggtttgctgcagagagcactcgagcacttcacagacctgtacgacatcaagcgtgcagta
gttcacactcacctcctcaatcctgagtggttagtgaattattttgggtccttatcagta
gaagactctctggagtgtctgcgtgcgatgttgtccgctaacatccgtcagaacctgcag
atctgtgtccaggtagcttccaaataccatgaacagctgtcaacacagtcactcattgag
ctctttgagtccttcaagagctttgaaggtttgttttattttctgggctccattgtaaac
ttcagccaggatccagatgtgcacttcaagtacattcaagctgcatgcaagacaggacaa
attaaagaagtggaaagaatctgcagggaaagtaactgctatgatccagaacgtgttaaa
aacttcctcaaggacatgtaccaggaagctaaactcactgaccagctgcctctcattatt
gtgtgtgaccgctttgactttgtccacgacttggtgctgtatttgtatagaaataatctc
caaaaatatattgagatttatgtacagaaggtgaatccaagccgtctgccagttgttatt
gggggactgcttgatgtggattgctctgaagacgtgataaagaatctcatccttgtagtg
agaggtcaattttcaactgatgaacttgttgcagaggttgagaaaagaaacaggctgaag
ctgcttctgccctggctggaagcaagaattcacgagggctgtgaggagcctgccactcac
aatgcactggccaagatatacattgacagcaacaacaacccagagagattcctgcgtgag
aatccctactatgacagtcgtgttgttggcaagtactgtgagaagagggaccctcacctg
gcctgtgtggcttacgagcgtggacagtgcgatctggagctgattaatgtgtgcaatgag
aactccctcttcaagagtctctcccgctacttagttcgtcgtaaggaccccgagctctgg
gccagtgtgctactggaaagcaacccctacagaagacccctgattgaccaggttgtccag
actgcgctgtcagagacccaggaccccgaggaagtgtctgtcactgtgaaggccttcatg
actgcagatcttcccaatgaactcattgaactgctggagaaaatagttctggataattca
gtgttcagtgagcacaggaatctgcagaaccttctcatccttacagctatcaaggctgac
cgcacccgtgtcatggagtacatcaatcgcctggataactatgatgcccctgatatagcc
aatattgctatcagcaatgagctttttgaggaggcatttgctatcttcaggaagtttgat
gtcaacacatcagctgtacaggtgttgatagagcacattgggaacctggaccgtgcgtat
gagttcgctgagcgctgcaatgaacctgcagtgtggagccagctggccaaagcacagctc
cagaaggggatggtaaaggaagcaattgactcctacattaaagcagatgatccttcctca
tacatggaagttgttcaagctgctaatgccagtggaaattgggaagaactggtgaagtat
ctgcagatggcacgcaagaaggcccgggagtcgtacgtggaaacagaattaatctttgct
cttgctaaaacaaaccgcctggcagagctggaggagttcatcaatggtcccaacaacgca
catatccagcaggttggtgatcgctgctatgatgagaagatgtatgaagcagccaagctg
ttgtacaacaacgtgtccaactttggccgtttggcctcgaccttagtgcacctcggcgag
taccaggcagccgtggatggcgctcggaaagccaacagcacccgcacgtggaaagaggtc
tgctttgcttgtgtggatggaaaagaattccgcctggctcagatgtgtgggctccatatt
gtagtgcatgcagatgagctggaagagctaatcaactattaccaggatcgtggctacttt
gaggagctgatcactatgttggaagcagcacttggactggagcgggcacacatggggatg
ttcacagagctggcaattctctactccaagttcaagccacagaagatgagggagcacttg
gagctgttctggtccagagttaacattcccaaggttctgagagctgcagaacaagcccat
ctctgggctgaactggtgttcctgtatgataagtatgaagaatacgataatgctataatc
acaatgatgaatcacccaacagatgcttggaaagaaggccagttcaaagatatcatcact
aaggtggccaatgtggagctgtactacaaagcagttcaattctatttggaatttaagcct
ctgttgctcaatgatctgctgatggtgttgtcccctcggcttgaccacactcgtgctgtc
accttcttcacaaaggttaaacagctgcccctggttaagccttacctgcgctctgttcaa
aatcacaacaacaaatcagtcaatgagtccctcaacaacctcttcattattgaagaagat
taccaggctcttaggacctctatagatgcttatgacaactttgacaacatttctcttgcc
caacgtttggagaaacacgagctaatagagttccgaagaatcgctgcctatctcttcaaa
ggcaacaaccgctggaaacagagcgtggagctctgtaagaaggacaggctgtacaaggat
gccatgcagtacgcttccgaatccaaagatactgagctggcagaagagctgctgcagtgg
ttcttgcaggagaacaagagggaatgctttggtgcttgtctcttcacctgctacgatctc
ctaaggccagatgttgtcttggaaacagcgtggaggcacaacattatggactttgccatg
ccatactttattcaggtcatgaaggagtacttgaccaaggttgatgcaataaaggaaaag
gtggataaactggatgcatcagagtctttgagaaaggaagaggagcaagctacagaaacg
caacctattgtttatggccagccccagctgatgctgacagcgggacccagcgtggcagtt
cctccgcaggcacctttcggctacggctacacggcccctccgtacgggcagccacagccc
ggcttcggctacagcatgtga
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integrated database retrieval system
