Parus major (Great Tit): 107212891
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Entry
107212891 CDS
T04864
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107212891 (SUPT6H)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107212891 (SUPT6H)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107212891 (SUPT6H)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
107212891 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
107212891
NCBI-ProteinID:
XP_015502224
Ensembl:
ENSPMJG00000019068
LinkDB
All DBs
Position
19:5441429..5467812
Genome browser
AA seq
1723 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEELNLDDQDEQGNLKGFIND
DDDEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKM
SDDEDDEAEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPQEEEEEEEEDESDIDD
FIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYEYE
DEETEGETRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLRSI
PVKSAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQASSFSRKGPSTIQKIKEALN
FMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAYQ
YEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKA
ARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQAAGLDGLAKKFGLTP
EQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREPLVR
QVLRQTFQERAKINISPTKKGKKDIDEAHYAYSFKYMKNKPVKELRDDQFLKMSLAEDEA
LLVIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFLYV
QMAKELKNKLLVEAKEYVLKACSRKLYNWLKVAAYRPDQQVEEDDDFMDENQGKGIRVLG
IAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFLLNK
KPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSENEF
RDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEDLLNALYCEFI
NRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPYRS
PNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVGMTV
HCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDMKRKQQRT
TYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHVDV
REEGKENAFSLGSMLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDKKKL
EELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPT
VNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQM
FSAIAAVTGQGQNPNATPAQWGSSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSYSY
TTPSQPITTPQYQLQANTTPQSTQSQAQSQPSSSSRQRQQPKTNSHAAIDWGKMAEQWLQ
EKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattttgtggagagtgaagcagaggagtcagaggaggagtacaaccaggatggg
gaggttgtacccagagtaaccaagaagtttgtagaggaagatgaggatgatgaggaagag
gaggagctgaacctcgatgatcaggatgaacagggaaacctgaaaggattcattaatgat
gatgatgatgaggaagaggaggaggaagccagtgactctggagactccgaggatgatgtt
ggccacaaaaagagaaagcgcactttcgatgaccgcctggaggatgatgactttgacctc
attgaagaaaacttgggcgttaaagtcaaaagacaaaaattcaggcgtgtgcggaaaatg
tctgatgatgaggatgatgaagcagaagattatggaaaggaagaacatgagaaggaagcc
attgctgaagaaatctttcaggatggtgaaggcgaggaaggaggggaagctgtggaagct
cctgttgctccacaggaagaggaagaggaggaggaggaagatgaatctgatattgatgac
ttcattgtggatgatgatggacaacctctgaagaagccaaaatggagaaagaagcttcca
ggatacacagatgctgccttgcaggaagcccaggaaatctttggtgtggactttgactat
gatgagtttgagaagtacaatgagtacgacgaggagatggaggaggagtatgaatacgag
gatgaggaaaccgaaggggagacccgcgtgcggcccaagaaaacaaccaagaaacgcgtc
agtcgccgcagcatcttcgagatgtacgagcccagtgagctggagagcagccacctcaca
gaccaggacaacgagatccgcatgacagacatgcctgagaggttccagctgagatccatc
ccagtgaagagtgctgaagatgatgagctggaggaggaagctgactggatttataggaat
gcatttgcaactcccaccatctccttgcaggaaagttctgattacctcgaccgtggacag
gccagcagcttcagccgcaaggggcccagcacaatccagaagattaaagaagccctgaat
ttcatgagaaatcagcattttgaggtcccattcatcgccttctacagaaaggagtatgtg
gagccagagctgcacatcaatgacctgtggagggtctggcagtgggatgagaagtggacc
cagctgaagatccgcaagcagaacctgacacgactgtttgagaagatgcaggcctaccag
tatgagcaaatctctgctgacccagacaagcccttggctgatggaataagggccctggat
actactgacatggagaggctgaaggatgtgcagtccatggacgagctgaaggacgtgtac
aatcacttcctgctgtactatgggagagacatccccaagatgcagaatgctgccaaggct
gctcgcaaaaagcaaaagcggatccgggaggatggtgaagaagaggaaggtgaaggggag
gatgcagaggatgatgagcagaaggggcctgagctgaagcaggcttcccgaagggatatg
tacaccatctgccaggcagctgggctggatggcttggctaaaaaatttggtctgacacct
gaacagtttggagagaatctccgagacagttaccagcgtcacgaaacagagcagttccct
gcagagcccctggagctggccaaggattatgtgtgcagtcaattcccaagcccggaagca
gtgctggaaggagctcggtacatggtggccttgcagattgccagggagcccttggtcaga
caggtcctgagacagactttccaagaacgagctaaaatcaacatttcaccaacaaaaaag
gggaagaaggatattgatgaagcccactatgcctattcctttaaatacatgaagaacaag
cctgtgaaggagctgagagatgaccagttcctgaaaatgagcctggcagaggatgaggca
ctgctggtcatagatatcagcattgacatgaaaggagtggagggttatggcagtgaccag
acgtactttgaggaaatcaagcagttctattaccgggatgagttcagtcaccaggtgcag
gagtggaatcggcagcgcaccatggccatcgagcgttccctcaaccagttcctctacgtg
cagatggccaaagaattaaagaacaagctcttagtggaggccaaggaatatgtcctgaag
gcttgcagccgcaaactgtacaactggctaaaggttgctgcatacaggccggatcagcaa
gtggaggaagacgatgatttcatggatgaaaaccaagggaaggggatccgggtgctgggc
attgcgttttcatcagccagggaccaccctgtgttttgtgcccttgttaatggagagggt
gaggtgacagacttcctccgattgccacatttcacaaagagaaggaatgcctggcgtgag
gaggagagggaaaagaaggcccaggatattgaaacattgaaaaaattcctcctgaacaag
aagcctcacgtggtgacaatcgccggcgagaacagggatgctcagatgctgatggaggat
gtaaagagaattgttcatgagctggaccaagggcagcagctgtcctcgatcggagtggag
ctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgagaatgaattc
cgggattacccccctctgctgcgtcaggctgtgtcccttgctcgccgcatccaggacccc
ctcatagagtttgcccaggtctgcagctctgatgaggatattctctgcctgaaactccac
cctctgcaggagcacgtggtgaaggaggacctgctgaatgcgctgtactgcgaattcatc
aaccgcgtgaacgaggtgggggtggatgtgaacagggccattgctcacccccacagccag
gctttgttgcagtatgtgtgtggcctgggaccacgcaaaggcacgcacctgctgaagatc
ttaaaacaaaacaacacccgtctggagaacaggacccagctggttacgatgtgtcacatg
ggacccaaagtgtttatcaactgtgctggcttcatcaaaattgacacagcatcactgggt
gatagcactgactcctacattgaagttctagatggctctagagtccatcctgaaacctat
gaatgggcaaggaaaatggcagtggatgccctggaatacgatgagtcagctgaggatgca
aatcctgcaggagctctggaggagatcctggaaaaccccgagcgcctgaaagatctggat
cttgatgcctttgctgaagaactggaaagacagggctatggtgacaagcacatcactttg
tatgacattcgagctgagctaagctgcagatacaaggacctgagaactccctaccgttct
cccaacacggaggaggtcttcaatatgctgaccaaagaaactccagagacattttacata
ggtaaaatgatcatctgcaatgtgactggcattgcccacaggcgcccacagggagagagc
tacgaccaggcgatacggaatgatgaaactggcctttggcagtgccctttctgccagcag
gacaacttcccagagctcagtgaggtttggaaccattttgacagcggttcctgcccaggt
caggccattggagtgaagacacgtctggataatggtgttgctggcttcatcccaacaaaa
tttcttagtgacaaggtggtcaagaggccagaagaaagggtgaaggtgggaatgaccgtc
cactgccgcatcatgaagattgacattgagaaattcagcgcagacctgacctgcaggacc
tcagacctgatggacaagaacaatgagtggaaactgcccaaagacacctactatgacttt
gactctgaggcagcggatcacaaacaggaagaggacatgaagagaaagcagcagaggaca
acctacatcaagagggtaattgctcacccatcattccacaacatcagcttcaagcaagca
gagaagatgatggagaccatggaccaaggggatgtgattattcggccaagcagcaaaggg
gagaaccacctgactgtcacctggaaggtcaacgatggcatttaccagcacgtggatgtc
cgagaggagggcaaggagaatgccttcagcctgggctccatgctctggattaacacagag
gagtttgaagacctggatgaaattgttgctcgttatgtccagccaatggcttcttttgcc
agagacctgttgaaccacaagtactatcaggactgcaatggtggagacaagaagaagctg
gaagagctgctgattaagaccaagaaagagaagccaacatttattccatactttattagt
gcctgtaaagatctacctggtaaattcctcttgggatatcagcctcgaggcaaaccaagg
atagagtatgtgacagtgacaccagagggattccgctaccggggccaagtcttccctact
gtgaatggacttttccgatggtttaaggatcattatcaggaccctgttccaggtattacc
cccagcagtagcagtaggaccaggactccagcctccatcaatgctactccagctaacatc
aacctggcagacctgacacgtgcagtgaacgctctgccacagaacatgacctcccagatg
ttcagtgccatcgctgctgtgacaggccagggacagaacccaaatgccaccccagcacag
tggggctccagccagtatggctacgggggcagcggaggcggcagcagcgcgtaccacgtc
ttcacaactccagcacagcagccggtggccacccctctgatgacccccagctactcgtac
actactcccagccagcccatcaccacaccccagtaccagctccaggccaacaccacaccc
cagtccacccagtcccaggcacagtcgcagccatcatccagctccaggcagaggcagcag
ccaaagaccaacagccacgctgccatcgactggggcaagatggccgagcagtggctgcag
gagaaggaggctgagcggaggaaacagaagcagaggttgacccctcgaccctctcccagc
cccatgatcgagagcacgcccatgtccatcgctggggatgccacgcctctcctggatgag
atggatcgatag
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integrated database retrieval system
