Parus major (Great Tit): 107212931
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Entry
107212931 CDS
T04864
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107212931 (VPS53)
Membrane trafficking [BR:
pmaj04131
]
Protein recycling
Others
EARP complex
107212931 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
107212931 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Sec8_N
GrpE
Laminin_II
NBD94
Syndetin_C
COG3_N
FUSC
COG5_N
MCPsignal
O_Spanin_T7
XhlA
Snf7
Tropomyosin
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
107212931
NCBI-ProteinID:
XP_015502336
Ensembl:
ENSPMJG00000019803
LinkDB
All DBs
Position
19:6747677..6809666
Genome browser
AA seq
831 aa
AA seq
DB search
MEEDEPELEAGLEAALELAPAVQAAIEQVFPSQDPLDRADFNAVEYINALFPTEQSLANI
DEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS
EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV
VNVLEHFNKYMGIPQIRQLSERVKAAQNELGQQILADFEEAFPSQGTKRTGGPSNVLRDA
CLVANVLDPRIKQEIIRKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEEK
YGRMFPAEWCMTERIAVGFCHVTRTELSKIMHTRAKEIEVKLLLFAIQRTTNFEGLLAKR
FSGCTLADGTVKKPEVPPPSTNPFLEDETGAEADEIVMEKSDMDKPKKPKVPDNPFHGIV
SKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNVDEGGAVLPSCADLFVYYKKC
MVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTITSLLKEKEGSEV
AKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVNASLMERINLTGEMDTFSVVISNS
IQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTRK
YFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRKA
PASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDMKGLKRS
EQSSMLDLFRLRLPAPPPGGDSAGSLSLSAPTPEQESSRIRKLEKLIKKRL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgagccggagctggaggccgggctggaggcggcgctggagctggcgccc
gccgtgcaggccgccatcgagcaggtatttcccagccaagatccactggacagagcagat
ttcaatgctgtggagtatattaatgctctctttcccactgagcaatctttggcaaacatc
gatgaagttgtgaacaagatcagattgaaaataaggaggttggatgacaacatccgaact
gtggtgaggggacagaccaacgtgggacaggatggcaggcaggccctggaagaagcccag
aaagccattcaacagctctttggtaaaattaaggatattaaagacaaggctgaaaaatct
gaacaaatggtgaaggaaatcacccgggatatcaagcagctggaccatgccaagcgtcac
ctgaccacctccatcaccaccctcaaccacctccacatgctggcaggaggggtggattct
ctggaggctatgaccaggaggagacaatatggggaagttgccaaccttctccaaggtgtt
gtgaatgtgttggagcacttcaacaaatacatggggatccctcagattcgacagctctct
gaaagggtgaaggcagcacagaacgagctgggccagcagatcctggctgacttcgaggaa
gcctttccttctcaaggtacaaagaggactggtgggcccagcaatgtcctgcgtgatgcc
tgcctggtagccaacgtcctggatcccaggatcaaacaggaaatcatcaggaaatttatt
aaacaacacctctctgagtatctggtccttttccaggaaaatcaagatgtggcgtggctg
gataagatcgaccggcgctacgcttggatcaagaggcagctggtggattacgaggagaag
tacgggcgcatgttccccgcggagtggtgcatgacggagcgcatcgccgtgggcttctgc
cacgtcaccaggacagagctctccaagatcatgcacacaagggcgaaggagattgaggtg
aaattgcttttgtttgcaattcagagaacaaccaacttcgaagggctcctggccaagcgc
ttctctggctgcactcttgctgatggcacagtgaagaagccagaagtgccacctccctcc
accaacccctttctggaggatgaaactggggcagaggcagatgagattgtgatggagaaa
agtgatatggacaaaccaaagaagccaaaggtccctgacaatcctttccatggcattgtt
tccaagtgctttgagcctcacctttatgtgtatatcgagtcccaggacaagaacctgggc
gagctgattgacaggtttgtggctgacttcaaggctcagggtccccccaagcccaacgtg
gatgaaggaggagctgtcctgcccagctgtgctgacctctttgtgtactacaagaagtgc
atggtgcagtgctcccagctcagcactggtgagcccatgatagccctgacaaccatcttc
cagaagtacctgcgggaatacgcctggaaaattctctctggaaacctgcccaagacaacc
agcagcagtggtgggctcaccatcacaagcttgctgaaagaaaaggaaggttctgaagtg
gcaaagtttactttagaagagctctgcctcatttgcagcatcctcagtactgcagaatat
tgcctggccaccacccagcagttggaagagaagctcaaagaaaaagtgaatgcgagcctg
atggagaggatcaacctgacaggagagatggacactttcagtgttgtgatctccaacagc
atccagctgttagtgcaggacctggatgcagcctgtgaccctgccctgactgctatgagc
aagatgcagtggcagaatgtggaacatgttggtgaccagagtccttatgtcacctcagtg
atcctccacattaaacagaatgtccccatcatccgtgacaacctggcctccacaaggaag
tatttcactcagttctgcataaaatttgcaaactccttcattcccaagttcattaaccat
ctcttcaagtgcaaacctatcagcatggtgggtgcagaacagctgctgctggacactcac
tctctgaagatggttctcctggatctgccctccattgggtcccaagtggtgaggaaggct
cctgccagctacacaaagatagtggtgaaaggcatgactcgggctgaaatgatcctgaag
gtggtgatggctccacatgagcccccagttgtgtttgtggacaattacatcaagcttctc
gctgactgcagcactgacacattccagaagatcctcgacatgaagggcctgaagaggagt
gagcagagcagcatgttggaccttttccgcctgcgcctccccgctcctccccccggcggg
gacagcgccggctccctctcgctgagcgctcccacgcccgagcaggaatcctctcggata
cgcaaactggagaaactcatcaaaaagagactctga
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