Parus major (Great Tit): 107213037
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Entry
107213037 CDS
T04864
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1
KO
K24318
scavenger receptor class F member 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107213037 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107213037 (SCARF1)
Membrane trafficking [BR:
pmaj04131
]
Endocytosis
Phagocytosis
Scavenger receptors
107213037 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_PEAR1L
EGF_Teneurin
EGF_2
LeuA_dimer
Motif
Other DBs
NCBI-GeneID:
107213037
NCBI-ProteinID:
XP_015502527
Ensembl:
ENSPMJG00000019033
LinkDB
All DBs
Position
19:complement(4943178..4949733)
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AA seq
872 aa
AA seq
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MESARPILCLQLWLWVQSSAQELDPEGRNVCRFPAGPACCPGWKQDGRACTVAVCEGEDA
CREGEVCVKPGLCRCKPGFFGADCSSRCPEQYWGHDCKRSCPCHPNGRCDPASGHCTCDP
NHWGGLCQFSCQCGPHGRCDPLSGACHCEPGWWAPGCRKQCQCNPSTSHCDPLSGLCRCL
PGWWGRRCSFKCSCNVSPCAQETGKCECLPGFWGPACQRRCDCGHGSCSPVTGHCSCEPG
YHGRSCRDPCPAGKYGSQCVHSCGSCKRSQPCSPVDGFCLACQPGWNGTLCKDPCAPGFH
GEGCLQLCPRCQHGEPCDPQTGSCLRCDPGWTGPSCNSSCPMGTFGDGCQFLCPECVSGS
CDPVTGVCICQAGYWGDSCNNTCPEGYFGVNCSSPCQCSRGTCNPVQGDCVLSLKDHGSL
AAAILVPLLLLLLCVICCCCGAGSADARDRAAVPDDDVVARMKHHVQGVLANLSALMPCF
NLGASKLPKVTVSHHDTEIPFNPSFIEPPSSAWVSDSSFSSFDTDNEGPEYSVPPREGIP
LLGGAELQDGASPPGQALPDPSAFDSEDVSQPFAIPRTSSIAKAKRPSVSFAEGTKFGAA
ETPSPSRKPKAPWGPSRLTPPPGDAAAEPHSERPASDCYENPEPLSKGDESHRPSPRATP
GGRRRVVSSTRNVAQRVEALEAAAKSCSWEAKGKEPNVTTIYMMVGTAGQDHKAEGAGEG
PVQAVLKRLGSLQRGKWAAKEEPKVRRSMEAIQKPPRRALAQRRDSENSCKQRESVTGAP
AESAPGKQQHPAAKRLSLLLASLSSKNTGAQDGTSETVGATEKGKSPELVGSLERKRQAA
AEEEPKYENVASSSADSLSGPGKELLATPPAT
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgcccggcccatcctctgcctccagctgtggctgtgggtgcagagctctgcc
caggagctcgatcctgagggcaggaacgtctgcaggttcccggccggccccgcatgctgt
cccggctggaagcaggacgggagggcgtgcacggtcgccgtgtgcgagggggaggacgcc
tgcagggagggcgaggtgtgcgtgaaacccgggctgtgccgctgcaaacccggcttcttc
ggagcagactgcagctcccgctgccccgagcagtactgggggcacgactgcaagcggagc
tgcccgtgccaccccaacgggcgctgcgaccccgccagcggccactgcacctgcgacccc
aaccactggggagggctgtgccagttctcctgccagtgcggcccccacggccgctgcgac
cccctgagcggcgcctgccactgcgagccgggctggtgggcacccggctgcaggaagcaa
tgccagtgcaacccttccacctcgcactgcgaccccctgagcgggctgtgccgctgcctg
ccgggctggtggggcaggaggtgcagctttaagtgctcctgcaacgtctcgccctgcgcg
caggagacgggcaagtgcgagtgcctgcctggcttttggggaccggcgtgccagcggcgc
tgcgactgcgggcacggctcctgcagtcccgtcaccggccactgctcctgcgagcccggc
taccacggcaggagctgccgggacccctgcccggcagggaaatacggatctcagtgcgtg
cacagctgtgggagctgcaagcgcagccagccctgctcacccgtggatggcttctgcctg
gcctgccagcctggctggaacgggaccctctgcaaggatccctgtgctcctggattccat
ggggagggctgtctccagctgtgtccccgctgccagcacggggagccctgcgacccccag
accgggtcctgcctgcgctgtgatcctggctggacaggacccagctgcaacagctcctgc
cccatgggcacctttggtgatggctgccagttcctctgccctgagtgtgtttcggggagc
tgtgaccccgtgacaggagtttgcatctgccaggctggctactggggagacagctgcaac
aacacctgtcccgaggggtattttggagtgaattgttcctcaccctgccagtgctcccgg
ggcacctgcaaccctgtgcagggtgactgtgtgctgagtttgaaggaccatggatccctt
gcagccgccatccttgtccctctcctgctgctgctgctctgtgtcatctgctgctgctgt
ggtgccggctcagcagatgccagagacagggcggctgtgccagacgatgatgtggtggcc
aggatgaagcaccacgtgcagggggtgctggcaaacctcagtgctctcatgccctgcttt
aacctgggtgcctcaaaacttcccaaagtcacagtttcccatcacgacacagaaatcccc
ttcaaccccagcttcatcgagccaccatcgtctgcgtgggtttcagacagctccttctcc
tccttcgacacagacaacgagggacccgagtactccgtccctcccagagaaggcatcccg
ctgctggggggggctgagctgcaggatggggcatccccccctggccaggcgctcccggac
ccttctgcctttgactccgaggatgtctcgcagcccttcgccatcccccgcacctccagc
atcgccaaggccaagcgaccatctgtgtcctttgccgaggggacaaaattcggggctgcc
gagacgcccagccccagccgcaagcccaaagccccgtggggcccatccaggctgacccca
ccgccgggggatgcggcggccgagccccacagcgagcgcccggccagcgattgctatgag
aaccccgagcccctcagcaagggggacgaaagccaccggccatcgcctcgggccaccccc
gggggacgccgcagggtcgtgtccagcaccaggaacgtggcccagagagtggaggcgctg
gaagcagctgcgaaatcctgcagctgggaggcgaaggggaaggaacccaatgtcaccacc
atctacatgatggtgggaacggcaggccaggaccacaaggcagagggggctggcgaggga
ccggtccaggctgtgctgaagcgtctgggcagcttgcagaggggcaagtgggctgcgaag
gaggagcccaaggtgaggaggagcatggaggccatccagaaacctcctcgccgggccctg
gcgcagcgcagggactcggagaacagctgcaagcagagggagagtgtgacaggggctcct
gccgagtcagcccctggcaagcagcagcatcccgctgcaaagagactgtccctcctcctt
gcatctctctcatcaaaaaacaccggtgcccaggacgggaccagcgaaaccgtgggggcc
acagagaagggcaaaagcccggagttagttggcagcctcgaaaggaagagacaggctgcc
gcggaggaagagccaaaatacgagaacgtggccagcagcagtgctgattcgctctccggc
cccggcaaagaactgctggccacccctccagccacctga
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