Parus major (Great Tit): 107213060
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Entry
107213060 CDS
T04864
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107213060 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107213060 (SS18L1)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107213060 (SS18L1)
GBAF(ncBAF) complex
107213060 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
107213060
NCBI-ProteinID:
XP_015502564
Ensembl:
ENSPMJG00000007653
LinkDB
All DBs
Position
20:complement(9954396..9968234)
Genome browser
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNINLGPGGMSQSASNQSLHSQSNLSDAIGTGLPPSSLMQ
SQISNGPNHVSMQQSGQSTMPTTSLSMTVSSHGTGPGYSHTVPASQNVPMQGQGSIGNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMMSQSNQGNSMMGQRPMGP
YRASQQGSSQQYMGQEEYYSEQYSHGQGSSEPMNQQYYPDGHGDYAYQQSSYTEQSYDRS
FDDSTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPNQQSYPGQQQGYGPAQGASSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcctttgcttctgctcgcccaagaggcaaaggagaggtcacccagcaaact
atccagaagatgctggatgaaaatcaccacttaatacaatgtattatggattatcagagc
aaggggaaaactgcagaatgtacccaataccaacaaatcttgcacagaaacttggtttat
ttggcaacaatagcagactctaaccagaatatgcagtccttgcttcctgctccaccaacg
caaaatataaacttgggcccaggagggatgagtcagagcgcatccaaccaatccctccac
tcccagagcaatctcagcgatgccatcgggaccggccttcctccttcctccctcatgcag
agtcagattagcaatggtcctaaccacgtgtctatgcagcagtcaggccagagcaccatg
cccacgacctctctgagtatgactgtcagcagccatgggactggccctggttacagccac
acagtgcctgcctctcagaatgtgccaatgcaaggccagggctcaataggcaattacgtc
tctcgaacaaacatcaacatgcagtctaatccagtctccatgatgcaccagcaagcagca
acgtcacattacaactctgcacaaggagggagccagcactaccagggacaatcctccatt
gccatgatgagccagagcaaccaaggcaacagcatgatggggcagcgacccatgggccct
tacagagcttcacagcaaggttcctcgcagcagtacatgggtcaggaagaatattacagt
gagcagtacagtcatggccaaggctcctcagaacctatgaatcagcaatactatccagat
ggacatggtgattatgcctatcagcagtcatcctatactgaacagagctacgaccggtcg
tttgacgactctacacaacactattatgaaggaggaaattctcagtacagccagcagcag
gcagggtaccaacagggagctgcacaacagcaaacatattcccagcagcaatacccaaat
caacagagttacccaggacagcagcaaggatatggtcctgcacaaggagcctcttcacag
tattccagctaccaacagggacaggggcagcaatatggaagttacagagcttcccagaca
ggcccatccgctcagcaacagaggccttatggctacgagcagggacaatatggaaattac
cagcaataa
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