Parus major (Great Tit): 107213258
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Entry
107213258 CDS
T04864
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107213258 (DDX27)
03009 Ribosome biogenesis [BR:
pmaj03009
]
107213258 (DDX27)
Enzymes [BR:
pmaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107213258 (DDX27)
Spliceosome [BR:
pmaj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
107213258 (DDX27)
Ribosome biogenesis [BR:
pmaj03009
]
Eukaryotic type
Pre-60S particles
Helicases
107213258 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Cas3-like_C_2
PRK
Motif
Other DBs
NCBI-GeneID:
107213258
NCBI-ProteinID:
XP_015502952
Ensembl:
ENSPMJG00000004376
LinkDB
All DBs
Position
20:6469531..6475929
Genome browser
AA seq
758 aa
AA seq
DB search
MATLESLGLVGTIAEGDVVPVDSESDDSEDEEELRRAPGPRRRGPSRGDFSIDFVFGEAE
AGGEDAWTAALRQLRAKKAATTLDEKIEKVRQKRKLQEREAKQAKVKDEDAEAEDDQTKK
KECGDCSRDDEDVESEYSLDDESIFTTADKVKVKEKKRSKKGEVEAESFFEDASQYDDKL
SFQDMNLSRPLLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVLE
RLIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALRS
GPDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSHHRQT
MLFSATMTEEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVTALL
TRTFQDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQTQRLESLRRFKDEQIDILV
ATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGKAGRSVSLVGEEERKMLKEI
VKTAKTAVKARILPQDVILKFREKIESLEKDIYAVLCLEREEREMQQSEAQINKAKKQLE
TGKKETGSESLERSWFQTREERKKEKLAKALQEFDLALRGKKKRKKFVRDTQNKAQMTPE
ERSQFEILKSQMYAERLAKRNRRAKRARALPEEEPTAAPAGPKKKKKVSVFDEELTNTSR
KALKQYRAGPSFEDRKRLGIAQRRKGGNFKSKSRYKRK
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggccacgctggagagcctgggcctggtgggcaccatcgccgagggggacgtggtgccc
gtggactccgaatctgatgactcggaggatgaggaggagctgcgccgggcgccgggcccc
aggcggcggggaccctcccgcggggacttcagcatcgatttcgtgttcggggaggcggag
gccggcggggaggatgcctggacggcagcgctgcggcagctccgcgccaagaaagcagct
acgacgttggatgagaagattgagaaagtgagacagaaaaggaagctccaggaaagggaa
gctaaacaagcaaaagtgaaagatgaggatgcagaggctgaagatgatcaaaccaaaaag
aaggaatgtggggattgcagtagggatgatgaagatgtggaatctgagtattcactggat
gatgaaagtatcttcacaacagcagataaggtcaaagtgaaggagaagaagagatcaaaa
aagggagaagttgaagcagagagcttttttgaagatgcttctcaatatgatgataagttg
tcattccaggacatgaatctttcacgacctttgctaaaggcaatcacagctcttggcttc
aagcaaccaaccccgattcagaaggcttgtatcccagtgggtcttctgggaaaggatatt
tgtgcttgtgctgctactgggacaggtaaaacagctgccttcatcttgcctgtcctcgag
cgcctgatctacaaacctcgtcaggctccaataacacgtgtactggttctggtgccaaca
cgagaactgggtattcaggtgcactctgtcacaaaacagctggcacagttcagcagtgtc
acaacttgcctggcagtaggtggcctggatgtgaagactcaggaagctgctctgcgctca
gggccagacattcttattgccactcctggccgactgattgatcatctccacaactgccct
tctttccacctgagcagtgttgaggtgctgattctggatgaagcagacaggatgctggat
gaatactttgaggaacagatgaaggagataatcaggttgtgttcccaccaccgtcagaca
atgcttttctctgccacaatgactgaggaggtgaaagatttggcttccgtttccctgaag
aatcccgtccgaatctttgtgaacagcaacacagatgttgctcctttcctgcgtcaggaa
tttatccggatcagacccaaccgggagggggaccgggaggccattgttacagctctgctg
acacgaacgttccaagatcacgtgatgcttttcacccagaccaagaagcaagctcaccgc
atgcacatcctgctgggactgatgggcctgcgggttggggagctgcatggcaacctctcc
cagacacagcggctggaatcactcaggcgctttaaggatgagcagattgatattctggta
gctacagatgtggctgcacgtggacttgatattgaaggtgttaaaacagtaatcaatttt
accatgcccaacaccatcaaacactatgtccaccgtgtgggtcggacagccagggcaggc
aaggctgggcgttcagtttcacttgtgggtgaggaagagcgcaagatgctgaaggagatt
gtcaagactgctaaaacagcagtgaaagccagaatcctcccccaggatgtcatattgaaa
tttcgggagaagattgagagtctagagaaagatatctatgcagttctctgcctggagcgt
gaggaacgtgagatgcagcagtcagaggcccagatcaacaaggcaaagaaacagctggag
acaggaaaaaaagagactgggagtgagagtttggagcggagctggttccagacccgtgag
gagaggaagaaagagaaattggctaaagccctgcaggaatttgacctagcattacgaggg
aaaaagaaaaggaagaaatttgtacgggacacacagaataaagcccaaatgacaccagag
gaaaggtcacagtttgagatcttaaaatctcaaatgtatgctgagcggttggcaaagagg
aatcgtcgagcaaagagagccagagccttgccagaagaggaaccaacagcagcaccagca
ggtcccaagaagaagaagaaagtgtctgtgtttgacgaagagctgaccaacacgagcagg
aaggctctgaagcagtaccgtgctggcccatcatttgaagatcgaaaacgcttgggtatt
gcccagcgcaggaaaggaggaaacttcaagtccaagtccaggtataagagaaagtaa
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