Parus major (Great Tit): 107213307
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Entry
107213307 CDS
T04864
Symbol
TOP1
Name
(RefSeq) DNA topoisomerase 1 isoform X3
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmaj03032
]
107213307 (TOP1)
Enzymes [BR:
pmaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
107213307 (TOP1)
DNA replication proteins [BR:
pmaj03032
]
Eukaryotic type
DNA Topoisomerases
107213307 (TOP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
107213307
NCBI-ProteinID:
XP_015503083
Ensembl:
ENSPMJG00000003051
LinkDB
All DBs
Position
20:5176938..5243178
Genome browser
AA seq
792 aa
AA seq
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MSGDQLHNDSQIEADFRANGLSVLSCSALSAFKSGSSLDFRMVPPDSHKHKDKHKDREHR
HKEHKKDKDKDREKSKHSNSEHKDSSEKKHKDKEKTKHKDGSSEKHKDKHKDKDKEKRKE
EKVGSSSSDIKIKKEKENGFSSPPRIKDEPDDDGFYASPKEDSKPLKRPREDDDADYKPK
KIKTEDIKKAKKRKQEEEEESKAKKVKSKDKKVPEADKRKKPKKEEEQKWKWWEEERYPE
GIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSTKAEEVATFFAKMLDHEYTTKEI
FRKNFFKDWRKEMTSEEKSTITNLSKCDFTHMSQYFKAQSEARKQMSKEEKQKIKEENER
LLKEYGYCVMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDSKIP
APPPGHKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKC
VDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHIK
LHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTSIL
NKHLQDLMEGLTAKVFRTYNASITLQQQLKELTNPDDNIPAKILSYNRANRAVAILCNHQ
RAPPKTFEKSMMNLQSKIDAKKEQLADARRELKSAKADAKVRRDEKSKKTVESKKKAVQR
IEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAWCKKWGIPIEKIYNKTQREKFA
WAIDMAEEDYEF
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggaccagctgcacaacgattcccagatcgaggcggatttccgagcgaacgga
ctctctgttctgagctgttcagcactgtcagcgtttaaatctggatcatctttagatttc
agaatggttcctcctgattctcacaaacacaaagataaacacaaagaccgagaacaccgg
cacaaagagcacaagaaggacaaggataaagaccgggaaaagtccaagcacagtaatagt
gagcacaaagattcctcggaaaagaaacacaaagacaaggagaaaaccaaacacaaagat
ggcagctcagagaaacacaaagacaaacacaaagataaagacaaggagaagagaaaggaa
gagaaggtgggttcatcttctagtgatataaaaataaagaaggaaaaggaaaatggtttc
tccagtccgccacgtattaaagatgaaccagatgatgatgggttttatgcatctcctaaa
gaggactccaagcccctgaagagacctcgagaggatgatgatgctgactacaaacccaag
aaaatcaaaacagaagacatcaagaaagcaaagaaaaggaaacaagaggaagaagaggag
agcaaagcaaagaaagtcaagagcaaagataagaaagtccctgaagcagacaaaagaaag
aagccgaaaaaagaagaggagcaaaaatggaaatggtgggaagaagagcgctatcctgaa
ggcattaaatggaagttcctagagcacaaaggtcctgtatttgctccaccatatgaacct
ctgcctgaaaatgtcaagttttattatgatggtaaagtcatgaagctgagtaccaaagca
gaagaagttgccacattctttgcaaaaatgcttgatcatgagtacactacaaaggagatc
ttcaggaaaaacttcttcaaggattggagaaaggaaatgacctctgaagagaagagcact
atcaccaacctcagcaagtgtgacttcacccacatgagccagtatttcaaagctcagtcg
gaagctaggaaacagatgtccaaggaggagaaacagaaaatcaaagaggagaacgagcgg
ctattgaaggagtatggttactgtgtgatggacaaccacaaggagaggattgccaacttt
aagattgaacccccaggtctcttccgaggtcgtgggaaccatcccaaaatgggaatgttg
aagagacgcatcatgcctgaagacatcatcattaactgcagcaaggattccaaaatccct
gcccctccaccagggcacaagtggaaggaggtccggcatgataacaaggtgacctggctg
gtgtcatggactgagaacatccaaggctctatcaaatacatcatgttgaaccctagctca
agaattaagggcgagaaggactggcagaagtacgagacagctcggaggttgaagaagtgt
gtagataaaatccggaatcaataccgagaagactggaaatccaaagagatgaaagtacgg
cagagggctgtggcgctgtacttcatcgataagcttgccctgagagctggtaatgaaaaa
gaagaaggagagacagctgacaccgtgggctgctgctctctgagagtagagcacatcaag
ctgcatcctgagctggatggacaggaatacgtggttgagttcgacttcctcgggaaggac
tccatccgatactacaacaaagtccctgtggagaaaagggtgtttaagaatcttcagctg
ttcatggagaacaagcagcctgaggatgacctctttgaccgcctcaataccagtatctta
aataaacaccttcaagaccttatggagggattgacagccaaggtattccgtacttacaat
gcctccatcacgctacagcagcagctcaaggagctcactaatccggatgacaacatccca
gcaaagatcctctcctacaaccgtgccaacagagcggtggccattctgtgtaaccaccag
agagctccacccaaaaccttcgagaagtccatgatgaatctgcagagcaagattgatgcc
aagaaggagcaattagctgatgccaggagggaactgaaaagcgccaaagctgatgccaag
gtccggagggatgagaagtctaaaaagacagtggagagcaagaagaaagcagtgcagagg
atcgaggagcaactgatgaagctggaggttcaggctacagatagggaggagaacaagcag
attgctttgggcacctccaaactcaactatctggatcccaggatctctgttgcctggtgt
aagaagtggggaattcctatagagaagatttataacaaaacccagcgagagaaatttgcc
tgggctatcgacatggcagaggaagactatgagttttaa
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