Parus major (Great Tit): 107213337
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Entry
107213337 CDS
T04864
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107213337 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107213337 (TAF4)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107213337 (TAF4)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107213337 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
107213337 (TAF4)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
107213337 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
107213337
NCBI-ProteinID:
XP_015503148
Ensembl:
ENSPMJG00000007656
LinkDB
All DBs
Position
20:10001632..10038255
Genome browser
AA seq
1103 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANAQTESSSGSKMGLSAPEITKAGAGGVQGGVINHNTR
SQTSALDGATTTSTSTTTAAAGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTTV
QTLNGSNVVMNSHHTGSAAFSGTPVTANPAPAPAVAPLVNNGPGSVGKGNAVNAVLPSAS
NTVIQTSFLNTAVSSASSSSPTVISSQPPPSVGTGAPTVTLVRPPIHTAGPTVAAAGAAT
QNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVNSQSGSTVPAAPATQVIKSESPKT
IVQAVSQQQTLATGGQPSTTGGSMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMAKGTA
NTVAQSLPRTPTPTTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQL
LMIPQQALAQMQAQAHAQSQPQNTLTPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTI
IKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATAVQTGTPQRTVQGTTATS
TAATETMENVKKCKNFLSTLIKLASSGKQSSETAANVKELVQNLLDGKIEPEDFTSRLYR
ELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATIATIPSAAAVLLSSS
VQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQSQKAGALIRPPQVTLT
QTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAIATVSTQVAAAQKNKLKE
PGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFPAPLQRRI
LEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQRNISYKDDERYEQASDVRA
QLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQR
DANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRD
LIFCLENERETSHSLLLYKAFLK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctgagggccgctggggggctgctggggaaccatgtt
gtgagcagcagcagtagcagcagcagccctagccccagccctggaggagtagtagtagga
ggcaatgctaatgcccaaacagagagcagcagcggcagcaagatgggactgagtgcccca
gagatcacaaaagcaggggcaggaggagtgcaggggggtgttattaatcataacaccagg
tcccagacttcagctctggatggagccaccacaacgagcaccagcaccaccactgcagca
gcaggaggatctgaagtcactgctgctccagggaccctcagtcagggcaaatcggtggtt
atcagcaccatggcaactgccttgtccaccaggaatggcaagattgggaccacgacagtg
cagactttgaatgggagtaatgtggtgatgaactctcaccacacaggaagtgctgctttc
tctgggactcctgtgactgccaaccccgctcctgcacctgctgttgcccctctcgttaac
aatggacctggatctgtggggaaaggaaatgctgttaatgctgttttaccctcagcttct
aacactgtcatccagacttctttccttaatactgctgtgtcctctgcatcctcctcctcg
cccacagtgatctcctcgcagccaccaccgagcgttggcactggggcgcccacggtaaca
ctcgtgaggcccccgatccacacagcaggacccacggtggctgcagctggtgcagccact
cagaacgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgctgtt
gccacagccactgtgggatctggagtttccctccagacgtcgcttgtgaacagccagtct
ggttccactgtgccagcagctcctgccacacaggtcatcaaatctgagtctcctaaaact
atagtccaggcagtatcccaacagcagacgctggctactggtggccagcccagtactaca
gggggtagcatgattattgggcaaactatgcaagctgggctctccaatgttgctcccaat
cctggtgggatacctcctgcagctcctggcacccccacaggaatggctaaaggcactgcc
aatacagtggcacaaagtctgccaaggactccaaccccaactacaagtggaatcagagcg
actttgactcctacagttttagcacctcgtttgcctcagccacctcagaatccgactaac
attcagaattttcagttaccaccaggcatggtcctggtgcgcagtgagaacgggcagctg
ctgatgatcccccagcaagccctggcacagatgcaggcacaggcacacgcccagtctcag
cctcagaacactctgactcctcgtcctgctacacctaccagtgcacccccagtgcagata
tccacagtgcaggctccaggaacacccattattgcacgacaggtgacacctactactatc
atcaagcaagtgtctcaggctcaaactacagtgcaacccacgacaacgctacagcgtccc
cctgttgtgcaacctcagattgttctgggtggtactgcacaaacaaccacgttggggaca
gcaacagctgtacaaactggaactcctcagagaacagtgcaagggacaacggccacctcc
actgctgccacagaaactatggaaaatgtgaagaaatgcaaaaactttctgtccacatta
ataaaactggcatcatctggaaaacagtcctcagagactgcggctaatgtgaaggaatta
gtacagaatctgctggatggaaaaattgaaccagaagattttaccagtaggctgtacaga
gaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagtttacctgcc
ttgagacagttaacaccagactctgcagctttcattcagcagagccagcagcagcagccg
acgacgcaggcgacgatagccacgatcccgtcagcagcagccgtgctgttgagctcctca
gtgcagcgcacggcaggcaaggccactgccactgtcaccagtaccctccagcaacccgtc
atcagcctcacccagcccacacaagtcggtgtcagtaaacaagggcagtccacgccactg
gttatccaacagtctcaaaaagcaggggcattgataaggcctccacaagtaacgttgaca
cagacaccaatggtggcattgcggcaaccacacagtcgtattatgctcactactcctcaa
atccaactgaatcaacttcagacagtacctgtggtaaaaccagcagtattacctggaaac
aaagctattgccactgtttcgacacaagtagctgctgctcagaagaataaactgaaagaa
cctgggggaggctcttttagggatgatgatgacattaatgatgttgcatcaatggctgga
gtcaacctgtcagaagaaagtgctcggatattggcaacaaactctgagctcgtgggcaca
ttaacaaggtcctgtaaagacgaaaccttccttttcccagcacctttacaaagaaggata
ttagaaataggtaaaaagcatggaataacagaaatccatcctgatgtagttagctacgta
tcacatgctacacaacaaagactacaaaacctcgtggaaaaactatcagagactgctcaa
caaaggaatatttcctacaaggatgatgaaagatacgaacaagcaagtgacgttcgggca
cagctcaagttctttgaacaacttgatcaaatagagaagcagcgtaaagacgaacaagaa
agggaaattttaatgcgtgcagcaaagtctcgatctcgacaagaagatcctgaacagctt
aggttgaaacagaaggccaaggagatgcagcagcaagagctagcacaaatgagacagagg
gatgccaacctgactgcgttagctgccatcggtcccaggaagaaaaggaaagtagactca
ccaggatctggatcagggacagagggatctggttcgagtgcagcagtcccaggcagctct
ggagttggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggac
ctcatattttgtttagaaaatgagcgagagacaagccattcactattgctatacaaagca
ttccttaagtaa
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integrated database retrieval system
