Parus major (Great Tit): 107213386
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Entry
107213386 CDS
T04864
Symbol
DHX35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmaj03041
]
107213386 (DHX35)
Enzymes [BR:
pmaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107213386 (DHX35)
Spliceosome [BR:
pmaj03041
]
Complex C
Other components
Complex C specific factors
107213386 (DHX35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
ABC_tran
DEAD
AAA_19
UPF0203
Motif
Other DBs
NCBI-GeneID:
107213386
NCBI-ProteinID:
XP_015503267
Ensembl:
ENSPMJG00000002979
LinkDB
All DBs
Position
20:4179460..4207408
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AA seq
712 aa
AA seq
DB search
MAAPVGPVKFWKPGSEGPGVSVSEERQSPAESSAVTVIYNPYASLSIEQQRQKLPVFKLR
NHILYLVENYQTLVIIGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVSVAGRV
ADERGAVLGHEVGYCIRFDDCTDPQATRIKFLTDGMLVREMMADPLLTRYSVLMLDEAHE
RTLYTDIAIGLLKKVQKKRGDLRLIVASATLDAEKFRDFFNQNDTGDPSKDTSVILTVEG
RTFPVDIFYLQSPVPDYIKSTVETTMKIHQMENDGDILAFLTGQEEVETVVSMLIEQARA
LARTGMKKHLRVLPMYAGLPSPEQLKVFERVPHTVRKVIVATNIAETSITVHGITFVIDC
GFVKLRAYNPKTAIECLVVVPVSKASANQRAGRAGRSRSGKCYRLYTEEDFEKLPKSTVP
EMQRSNLAPVILQLKALGIDNVLRFPFLSPPPAQSMVQALELLYALGGLDMHCRLTEPLG
MRIAEFPLNPMFAKMLLESGNFGCSQEILTIAAMMQIQNIFVIPPNQKNQAARQHRKFAV
EEGDHLTMLNVYEAFVKHSKSSQWCQDHFLNYKGLVRASVVREQLKKLLVRFKVPKKSSE
GDPDPVLRCIVSGFFANAAKFHSTGAYRTIRDDHELHIHPSSVLYAEKPPRWVVYNEVIQ
TAKYYMRDVTAVESSWLLELAPHFYQQGTVRNRHKGQTHLSLKAKRAKVDDH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcccgtggggccggtgaagttttggaagccgggctcggaaggtcctggtgtc
agtgtctcagaggagaggcagagccctgctgagagcagcgctgtgaccgtcatctacaac
ccttatgcttccctctccattgaacagcaaaggcaaaagctgcctgtttttaagctaaga
aatcacatcctttacttagtggagaactaccagactctggtgattattggggaaacagga
tgcgggaaatcaacgcagattccacaatacctggctgaagctggctggacagccgaagga
agagttgttggggtgacacagcctcggcgggtcgctgctgtttcagttgcaggccgagtt
gctgatgaaagaggtgcagtgctgggacatgaggttggatactgtatccggtttgatgac
tgcacagacccacaggctacaagaattaagtttctaactgatggtatgctggtgagggaa
atgatggctgatcctttattaacaagatacagtgtcctcatgctggatgaagctcatgaa
aggactctttatacagacattgctattggcttactaaaaaaggttcagaagaagcgtggg
gatcttcgcctgattgtggcttcagccaccttggatgcagagaaattcagggatttcttt
aatcaaaacgataccggtgaccccagcaaggacaccagtgtgatccttactgtcgagggg
aggacatttccagtggacatcttttacctgcagagccctgttcctgactatataaaatca
actgtggaaactacaatgaaaattcaccagatggagaatgatggtgatatactggcattt
ttaactggccaggaggaagtggagactgttgtttccatgctcatagaacaggctcgggcc
cttgctcgcactgggatgaaaaagcacctccgtgttctccccatgtacgctgggctgcct
tctcctgagcagctgaaagtctttgagagagtccctcacactgtcaggaaggtgatcgtc
gccaccaacatcgctgagacctccatcacggtgcacggcatcacctttgtcatcgactgc
ggctttgtgaagctgcgtgcctacaaccccaagacagccatcgagtgcctggtggtggtg
ccggtgtccaaggcctcggccaaccagcgggcagggcgcgccggccgcagccgctccgga
aagtgctaccgcctctacacagaggaggactttgagaagctgcccaagtccacggtgccg
gagatgcagcgcagtaacctggcccctgtcatcctgcagctcaaggctttgggcatcgac
aacgtgctcaggttccccttcctctcaccaccccctgcacagtcaatggtgcaagcttta
gagttgctgtatgctttaggaggtctggatatgcactgccgattaacagagcctctggga
atgagaatagcagagtttcctttgaatcctatgtttgcaaagatgcttctggaatcagga
aattttggctgctcccaagagattttgacaattgctgccatgatgcagattcaaaacatc
tttgtgatccctccaaatcaaaaaaaccaggctgccaggcagcacagaaagtttgctgtg
gaggaaggtgatcatctgaccatgctgaatgtttatgaagcctttgtcaaacacagcaag
agctcccagtggtgtcaggatcactttctgaactataaagggcttgtgagagcatctgtt
gtaagagagcagctgaaaaaacttctcgtccgctttaaagtgccaaagaagtccagtgaa
ggtgatccagatcctgttttgaggtgcatagtttctggattcttcgctaatgcagctaaa
ttccactccacaggagcttacaggactatccgtgatgaccacgagcttcatatccacccc
agctcagtgctgtatgcagagaaacctccacgctgggtagtttacaatgaagtcatacag
actgctaaatactacatgagagatgtgacagctgttgaatcctcctggctcttggaactg
gcacctcacttttaccagcaaggaacggtacggaatcggcataaaggccaaacgcatctt
tccttgaaagcaaaaagggctaaagtagatgaccactga
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