Parus major (Great Tit): 107213408
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Entry
107213408 CDS
T04864
Symbol
NFATC2
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 2
KO
K17332
nuclear factor of activated T-cells, cytoplasmic 2
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04020
Calcium signaling pathway
pmaj04148
Efferocytosis
pmaj04218
Cellular senescence
pmaj04310
Wnt signaling pathway
pmaj04370
VEGF signaling pathway
pmaj04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107213408 (NFATC2)
04370 VEGF signaling pathway
107213408 (NFATC2)
04020 Calcium signaling pathway
107213408 (NFATC2)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107213408 (NFATC2)
09143 Cell growth and death
04218 Cellular senescence
107213408 (NFATC2)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107213408 (NFATC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107213408 (NFATC2)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
107213408 (NFATC2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Motif
Other DBs
NCBI-GeneID:
107213408
NCBI-ProteinID:
XP_033375077
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All DBs
Position
20:13422381..13488733
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AA seq
836 aa
AA seq
DB search
MGRYGQPDSIGPPPTHPANAAGASSPSPRIEITPYHELIHSGGPFRSRDTDVLLVEHQSN
SATTSPRVTLPVPGFEGYREPLCLSPASSGSSASFISETNVSPCTSPCVSPNNGPSDDLC
PQFQNIHTHYSPRTSPIMSPRTSITEEACLGRHSPSPCPNSRSSSPGAKRRYSCTELYSA
QLPPASPRHSRTPSPQPSPRIPLGEDASAVTYTQLASASLSMDAMSSLPTDPSCGVPTKI
WKTSPDPSSMSSHKNSIPCHVFQTVDFHGPCEQEDRRNSAPESILLVPPSWTKQLVPAIP
ICSLPVQSLPPLEWPLSSQSGSYELRIEVQPKPHHRAHYETEGSRGAVKAPTGGHPVVQL
HGYMENKPLGLQIFIGTADERILKPHAFYQVHRITGKTVTTTSYEKIIGNTKVLEIPLEP
KNNMKATIDCAGILKLRNADIELRKGETDIGRKNTRVRLVFRVHIPEPSGRIVSLQAASN
PIECSQRSAHELPMVERQDIDSCLVYGGQQMILTGQNFTAESKVVFTEKTSDGQQIWEME
ATVDKDKSQPVIYTHRSCKRLKSLVTSRKTSLFLLSSLRITSFAFILVPSIKTEPIDDYD
PALICSPVHSALGTVTQPYYSQHTLATESPSCLVATMAPCQQLRSGLSSPDSRYHQQNPA
VIYQRSKSLSPSQLGYQQPNLMATPVAIADAHRSVLVHAGSPGQAGAVLQHSPGHQQSSP
VIHYSPTNQQLRCGSHQEFQHIMCCENFTSSVSRSSQPQASQAQRLSPGSYPTVIQQQAA
PGQRAAKNGPPGSEQKEVLPAGVTIKQEQNLDQAYLDDVNEIIRKEFSGLPARSQT
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgggcagatatggacagccagatagcatagggccaccacctacacaccctgccaacgct
gcaggggcctcttctccgagccctaggattgaaataactccatatcatgaactgattcac
tcggggggtcccttccgcagcagagacacagatgttctgttggtagaacatcagtcaaac
tcagccaccactagcccgagggttaccctgcctgtccctggctttgagggctacagagaa
ccactgtgtctgagcccagctagtagcggctcctctgcaagtttcatttcagagacaaat
gtatctccttgcacatcaccatgtgtttcaccaaataatggtcctagtgatgacctttgt
ccacagtttcaaaacatccatactcattattctcctagaacctctccaataatgtcacca
cgaacaagcatcacggaggaagcctgcttgggacgccactcaccatcaccctgtcccaac
tcaaggtcttcgtcaccaggtgcaaaacggaggtactcttgcaccgagctgtacagcgct
cagctgcctcccgcctctcctcggcactcacggaccccctctccacagccctctcctcgc
atccccctgggagaagacgcctctgcagttacttacacgcagttggccagcgcttccctt
tccatggatgctatgagcagcctccctacggatccttcctgtggtgtccccacgaaaatt
tggaaaaccagccctgatccttcatccatgtcttcccacaaaaacagcattccgtgtcac
gtctttcagactgttgacttccacgggccttgtgagcaggaggacaggagaaactcggcc
ccagaatccattctgttggttcctccgtcctggacaaagcagctggtgcccgcaataccg
atctgcagcttgcccgtgcagtccctgccgccgctggagtggcccctgtccagccagtcg
ggctcctacgagctgcggatcgaggtgcagcccaagccccaccaccgcgcgcactacgag
accgagggcagccgtggcgctgtcaaggcacccactggtggccaccccgtggtccagctg
catgggtacatggagaacaaacccctgggcctgcagatcttcattggcacggcggatgag
cgcatcctgaagccccacgccttctaccaggtccatcgcatcacgggcaaaaccgtcacc
accaccagctacgagaagatcattggcaacaccaaagtgttagagatccccctggaaccc
aaaaacaacatgaaagcaaccattgactgcgcggggatcctgaagctgcgcaacgcggac
atcgagctgcgcaagggcgagaccgacatcggccgcaagaacacgcgagtgcgcctcgtg
ttccgcgtgcacatccccgagcccagcggcaggatcgtgtccctgcaggcggcctccaac
cccatcgagtgctcccaaaggtctgctcatgagcttccaatggttgaaagacaagacatt
gacagctgcctggtttatggaggacagcagatgattctcactggacagaacttcacagca
gagtccaaggtggtgttcacagaaaaaacatcagatgggcagcagatctgggaaatggag
gcaacggtggacaaggataagagccagcctgtaatttacacacacagatcttgtaaaagg
cttaaatctcttgttacttcaaggaaaacctctctgtttctcctcagctcgttacgaata
acgtcctttgcatttattctagtaccatcaatcaaaacagagcccattgatgactatgat
ccagccctaatctgcagtccagtgcacagtgctctggggacagtaacacagccttactat
tcacagcacacgctggccaccgagtccccctcctgcctggtggccaccatggctccttgc
cagcagctgcgctcaggcctctcctctcccgactcgcgctaccaccagcagaacccagct
gtcatttaccaaaggagcaagagcctgagccccagccagctgggctaccagcagcccaac
ctgatggccacaccagttgccattgccgatgcccaccggtccgtgctggtgcacgcgggg
tctccaggccaagctggagccgtgctgcagcactccccaggccaccagcagtcctctcct
gtcatccactactctccaaccaaccagcagctgaggtgtggcagccaccaggagttccag
cacatcatgtgctgtgagaatttcacgtccagcgtgtcgagatccagccagccccaggcc
agccaggcgcagaggctcagccccggctcgtaccccaccgtcatccagcagcaggcggcc
cccggccagcgggcagccaagaacgggccaccagggagcgagcagaaggaggtgctgccg
gcaggagtgaccatcaagcaggagcagaacctggaccaggcgtacctggatgatgttaac
gaaattatcaggaaggaattttctggactccctgccagaagtcagacatag
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