Parus major (Great Tit): 107213565
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Entry
107213565 CDS
T04864
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107213565 (CHD5)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107213565 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
107213565
NCBI-ProteinID:
XP_015503591
Ensembl:
ENSPMJG00000010482
LinkDB
All DBs
Position
21:3832388..3855958
Genome browser
AA seq
1959 aa
AA seq
DB search
MRGPAAARELLDDADNEEDVSEEDDGVLEGLDEFFAEDQIVVQKKKKSKKLKDGKSAKIK
RRKKEGSNDEMSENEEEIEEKSESEGSDYSPNKKKKKKLKDKKEKKPKRKKKDEEEDDNE
DGGLKEPKSSAQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKM
MTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVSIAPALPASPQHSALPTVIRKAKT
KEGKGPGVRKKIKGSKDGKKKGKGKKMGGLKFRFGGIPSKRKKGSSSEEEEREESDFDSA
SINSSSMRSECSAGLGKRGKKRKKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRA
YHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEDGGEEEEDDHMEFCRVCKDG
GELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAAAL
PAALPAPDPELAVPPPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQR
KNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDK
KGDIHYLIKWKDLPYDQCTWEIDDIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGK
KLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILA
DEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDK
ESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACL
VVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGF
LEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFIL
TRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSG
KLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAID
RFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVM
IYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDD
VEGMVSQGQRIAMPDAVTPFSDTLSTKGGAATPGMKKKHGGTPPGDNKDVDDSSVIHYDD
AAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDY
WEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGSEDE
DEDFEERPEGQSGRRQSRRQLKTDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRW
GMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQH
VLTRIGVMSLVRKKVQEFEHVNGKYSTPDLVLEGPESKRSSEVVSSDPNTPVPASPAHTH
TGPGALTDKTEAQLGFHEEKDPVEQKPRKVSDSQVPASAEVESEEHPESCDSKERPREEK
QEDCEKAEPSSEPLVKGLFLPADEGIQEQEKPLEKAELSSSPGKGEDKEVKPAEDGKEEE
KEPNDAQQNGDKEEEEEGKKDDRSMNFRFMFNIADGGFTELHTLWQNEERAAMSSGKIYD
IWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFK
LLEQALVIEEQLRRAAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPAN
AVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPAAQG
SFGSAQIFNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccggcggccgcccgggagctgctggacgacgcggacaacgaggaggacgtg
tcggaagaagatgatggggtgctggaaggattggatgagttttttgcagaagaccaaatt
gtggtacagaaaaagaagaaatccaagaagctgaaagatggcaaatctgccaaaatcaag
aggaggaagaaggaggggagcaatgatgaaatgtcagaaaatgaagaagagatcgaggaa
aaatcagaaagtgaagggagtgactattctcccaacaaaaagaagaagaaaaaactgaaa
gacaaaaaggagaaaaagccaaaacggaagaagaaggatgaagaggaggatgacaatgaa
gatggaggtttaaaggagcccaagagctcagcccagctcatggaggaatggggtctcgat
gacgtagattacgttttctcagaagaggattatcatactttgacgaattacaaggctttc
agccagttcctcaggcccctgattgccaagaagaaccccaagatccccatgtccaagatg
atgacggtgctcggtgccaagtggcgagagttcagtgccaacaaccccttcaagggcagc
tcggcggcggcggctgcggcagctgttgctgcagctgtggagactgtcagcatcgccccg
gcgctccccgccagcccccagcactctgccctgcccaccgtcatcaggaaggccaagacc
aaggaggggaagggtccaggtgtacggaagaaaattaagggctccaaagacgggaagaaa
aaggggaaagggaaaaagatgggaggcttgaaattccggtttggaggaatccccagcaaa
aggaaaaagggctcctctagtgaagaggaggaacgggaagaatccgactttgacagcgcc
agcatcaacagctcctccatgcgctccgagtgctcggctggcctggggaagagagggaag
aagaggaaaaagaaaaagaggatcgaagagggggacgggtacgagacggaccaccaggac
tactgtgaggtgtgccagcagggcggggagatcatcctgtgcgacacctgcccccgcgcc
taccacctggtgtgcctggaccccgagctggagaaggcccccgagggcaagtggagctgc
ccccactgtgagaaggagggcatccagtgggagccgaaggaggaggaggaggaagaagag
gatggtggtgaggaggaggaggatgaccacatggagttctgccgggtctgtaaggatgga
ggggagctgctgtgctgtgacacctgcccgtcctcctaccaccttcactgcctgaacccg
ccgctgccagagatcccaaatggtgaatggctctgcccacgctgcacatgccctcccttg
aaggggaaagtccaacgcatcctgcactgggcctggaaggagccgccggccgccgcgctc
ccggccgcgctgcccgccccggaccccgagctggccgtccccccacccaaggtgctggag
gggatcccggagcgcgagttctttgtgaagtgggcaggcctctcctactggcactgctcc
tgggtgaaggagctgcagctggagctctaccacaccgtgatgtaccgcaactaccaacgg
aagaacgacatggatgagccaccagccttcgactacggctctggggacgaggacagccag
agggagaagcggaagaacaaggacccccagtatgccaagatggaggagcggttctaccgc
tatggcatcaagcctgagtggatgatgatccaccgcatcctgaaccacagctttgataaa
aagggagacatccattacctgatcaagtggaaggacctgccctatgaccagtgcacctgg
gagatcgatgacatagacatcccttactatgagaacctcaaactcctctactggaaccac
agggagctgatgctgggggaggacacgcgccctctgaagaagctgaacaagaaagggaaa
aagctgaaagaggagaagctggaaaagcctccagaaacacctcttgtggatcctacagtg
aagtttgacaagcagccgtggtacattgatgccacgggaggcacgctgcacccttaccag
ctggaagggctgaactggctgagattctcctgggcacaaggaacagatacaatcctagct
gatgaaatggggctagggaagacagtgcagactattgtgttcttgtattccctgtacaag
gagggccactcgaaagggccatacctagtcagtgcccccctctccaccatcatcaactgg
gagcgtgagtttgagatgtgggcacctgacttctacgttgtgacctacacgggagacaag
gagagccggtcggtcatccgggaaaatgagttttcttttgaagacaacgccatccggagt
gggaagaaggtcttcaggatgaagaaggaagcccagatcaagttccatgttctgctcaca
tcctatgagctgatcaccattgaccaggcagttctgggctccatagagtgggcttgtctg
gtggtagatgaagcacacaggctgaagaacaaccagtccaaattctttagagtactgaat
agctacaagatcgattacaagctgcttctcacagggactccgctccagaacaacttggaa
gagctcttccacctgctcaatttcctgactccagagaggtttaacaacctggaggggttc
ctggaggagtttgcagacatctccaaggaggaccagatcaaaaagctccatgacctgctg
ggtccccacatgctgcggcggctcaaggccgatgtgttcaagaacatgccagccaagacg
gagctgatcgtgcgagtggagctgagccagatgcagaagaagtactacaaattcatactg
acaaggaactttgaagccctgaattcgaaaggtggtgggaaccaggtctcactgctcaac
atcatgatggacctgaagaagtgctgcaatcacccatacctgttccctgtggcagctgtg
gaggccccagtgctgcccaatggatcttatgatgggaattctttggtcaaatcttctggg
aaactgatgctgctccaaaagatgctgaagaagttacgagatgggggtcacagagttctg
atcttctcgcagatgacaaagatgctggatttgctggaggatttcctggagtacgaaggc
tacaagtacgaacggatcgacgggggcatcaccggcggcctgcgccaggaggccatcgac
aggttcaatgctcctggggctcagcagttctgcttcctcctctccacccgtgccggtggt
ctgggcataaaccttgctacggccgacactgtcattatttatgattctgactggaatccc
cacaatgacatccaggcgttcagcagagctcaccgcatcgggcagaacaagaaggtgatg
atttaccgcttcgtgaccagggcctctgtggaggagcgcatcacccaggtggccaaaagg
aagatgatgctcacccacctggtggtccgcccggggctcggctccaagtcgggctccatg
accaagcaagagctggatgacatcctcaagtttgggacagaagaactcttcaaagatgat
gtggagggcatggtgtctcagggacagcggattgccatgccagatgctgttacccctttc
tccgacacactgtcaacaaaagggggtgcagcaacccctggcatgaaaaaaaagcatggt
ggcaccccaccaggtgacaataaggatgtggatgacagcagtgtgatccactatgatgat
gctgccatctctaagcttttggaccgaaaccaagatgcgactgatgacacggagctgcag
aacatgaatgagtatctcagctcctttaaagtggctcagtatgttgtgagagaagaggat
ggtgtggaggaggtggaacgggagatcatcaagcaagaggagaacgtggaccctgactac
tgggagaagctgctgcggcaccactatgagcagcagcaggaagatctggccaggaacctg
ggaaaagggaagagaatccgcaagcaggtcaactacaatgacacctctcaggaggaccaa
gagtggcaggacgagctctctgacaaccagtcagagtattccattggctctgaggatgag
gatgaagactttgaagagaggccagaaggccagagtggcagaagacaatcccggagacag
ctgaagactgacagagacaaacctctccctcctttgctggcaagagttggggggaacatt
gaggttctgggcttcaacgcccggcagcgcaaggcattcctgaatgccatcatgcgctgg
ggaatgccgccccaggatgccttcaactcccactggctggtccgggatctgcgagggaag
agcgagaaggagttcagggcgtatgtctctctcttcatgagacacttgtgtgagcctggg
gcagatggtgctgaaacctttgcggacggcgttccccgggaagggctgtcacgccagcac
gtgctgactcgcatcggggtcatgtcactagtaaggaagaaggtccaggagtttgagcat
gtcaatgggaagtacagcaccccagacctggttcttgagggcccagagagcaagagatcc
agtgaggttgtgtcttcagatcccaacacgcctgtcccagccagtccagcgcacacacac
acgggaccaggggcccttacagataaaacagaagcacaactggggttccatgaggaaaag
gacccagtggagcagaagcccagaaaggtgtctgacagccaggtgcctgcaagtgccgag
gtggagagtgaagagcacccagaaagctgcgacagcaaggagaggccaagggaagagaag
caagaggattgtgagaaggctgagccttcttctgagcccctggtgaaaggcctatttctt
cctgcagatgaggggattcaagagcaagagaagcctttggagaaggcggaattgagcagc
agcccagggaagggggaggataaagaagtcaaaccagcagaggatggcaaggaggaggag
aaggagccaaatgatgcccagcaaaatggtgacaaagaggaagaggaggaaggaaagaag
gatgacagaagcatgaatttcagattcatgttcaacattgccgacggtggcttcacagag
ctgcacacgctgtggcagaatgaggagagggctgccatgtcctctggcaagatctacgac
atctggcaccgccgacacgactactggctgttggcaggaattgtcactcatggctatgcc
cgctggcaggacatccagaatgacccacgctacgtgatcctgaacgagcccttcaagtca
gagatacacaaggggaattacctcgagatgaagaacaagttccttgcccggcggtttaag
ttgttggagcaggccctggtgatcgaggagcagctgcggagggcggcgtatctcaacatg
acccaagacccgagtcacccggccatggcactgaacgcacggctggcagaagtggagtgc
cttgccgagagccaccagcacctctccaaagagtccctggctgggaacaagcctgccaac
gctgtcctgcacaaggtgctgaaccagctcgaggagctgctgagtgacatgaaggctgat
gtgacacgcttgccctccatgctgtcccgcatcccacccgtggccgcccggctgcagatg
tcagagcggagcatcctcagccgcctggccacccgtggaggggatccagctgcccagggc
tcctttggctcagcccagatcttcaacaacaactttgggccaaatttccgtggtcctggg
ccgggtgggattgtcaactacagccagatgcctctgggaccctatgtgactgatatttag
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integrated database retrieval system
