Parus major (Great Tit): 107213668
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Entry
107213668 CDS
T04864
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmaj04515
]
107213668 (CLSTN1)
Cell adhesion molecules [BR:
pmaj04515
]
Cadherins
Cadherin related
107213668 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
EphA2_TM
SID-1_RNA_chan
V_ATPase_I
Cadherin_C_2
PFF1_TM
Zip
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
107213668
NCBI-ProteinID:
XP_015503844
Ensembl:
ENSPMJG00000014822
LinkDB
All DBs
Position
21:complement(7034239..7064553)
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AA seq
969 aa
AA seq
DB search
MPAPAARLLLAALLCGAAAAARVNKHKPWIETTYHGIVTENDNTVLLDPPLIALDKDAPL
RFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLDCELQKDYTFTI
QAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKRSDNILRVEAV
DADCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLSYGKEHQYKLTVTAYDCGKKRAA
EDVLVKISVKPTCKPGWQGWSKRIEYEPGTGSLALFPGMHLETCDEPITSVEATVELETN
HIGKGCDRDTYSEKSIHRLCGAASGTAELLPPPSSAANWTVGLPTDNGHDSDQVFEFNGT
QAVKIPDGVVTVSLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYSLYVHNCRLV
FLFRQDPSEGKSYKPAEFHWKLNQVCDKEWHHYVVNVEFPAVSLYVDGVSYDPFPVTEDY
PLHPSKIETQLVVGACWQEYTGNENDNETVPETSAGGELHMAQFFRGNLAGLMIRSGKLE
NKKVIDCLYTCKEGLDLQMADGVGKGVKIHMNPSQSMLTIEGDDIDRVDKAMQHISYLNS
RQFPTPGIRRLKITSTVRCFNEEACVSIPSVEGYVMVLQPEEPKISLSGINHFARSASEF
ESSEGVSLFPELRIISTITREVEPEGDGDEDPTVQESLVSEEIMHNLDMCEVTVMGEELN
QEQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMANYEEVLHLIRYRNWHTASLFDRKF
KLLCSELNGRYVSNDFRVEVNVIHTASPVEHANHIAAQPQFIHPVHHSFVDLSGHNLANP
HPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTI
TVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQEDQQNVNRQQQL
EWDDSTLSY
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgccggcccccgccgcccgcctgctgctcgccgcgctgctctgcggagcggcggcggcc
gctcgagttaacaagcataagccatggattgaaacaacctatcatggcatagttacagaa
aatgacaacaccgtgctcctggacccccctttaatagccctggacaaggatgctcctctg
cgctttgcagagagttttgaggtgacagtcaccaaagaaggtgagatctgtggatttaaa
atccacgggcaaaatgttccctttgaagcagtggtagtggataaatccactggagaggga
ataatacgctctaaggaaaagcttgactgtgagctgcagaaggattacaccttcaccatc
caggcctacgactgtgggaagggaccagatggagcaaatgcaaagaaatcccacaaggcc
acagtccatatccaggtgaacgacgtcaacgagtacgccccggtgttcaaggagaagtcc
tacaaggccacggtcatcgagggcaagaggtctgacaacatcctcagggtggaggctgtg
gatgcagactgctccccccagttcagccagatctgcagctacgagatcgtgaccccagac
gtgccctttgccatcgacaaagacggttatataaaaaacacagaaaagttaagctatggt
aaagaacaccagtataaactgacagtaacagcctatgactgtgggaagaagagagctgct
gaggatgtgctggttaaaattagcgtgaagcctacgtgcaagcctggctggcaaggttgg
agcaaaagaatagaatatgagcctggcactggttctctggctctgttccctgggatgcat
ttggagacatgtgatgagccaataacctcagttgaagcaacggtggaactagaaaccaac
catattggcaaaggctgtgatagagacacctactctgagaaatccatccacaggctctgt
ggtgctgcttctggcacagctgagctgctcccccctccaagcagtgctgctaactggacc
gtggggctgcccacggataatggccatgacagcgaccaggtcttcgagttcaatggcacc
caggctgtgaagattccagatggtgtagtcacagtcagtctgaaagagcccttcatgatt
tcagtgtggatgaggcacgggcctggaaccaaagagaaagagacaattctgtgcaattca
gacaagacagatatgaaccggcaccactacagcctctacgtgcacaactgccgcctggtc
ttcctgttccgccaggatccttctgagggaaaatcctacaaacctgctgagttccactgg
aagctcaatcaggtgtgtgacaaagagtggcaccactatgttgtcaacgttgaatttcct
gctgtgtctctttacgtggatggtgtttcctatgatcccttcccagtcactgaggattac
ccactccacccttccaagatagaaacacagctggtggttggagcatgttggcaagaatat
acaggaaatgaaaatgacaatgaaactgtgcccgagacctctgcaggtggtgagctgcac
atggctcagtttttccgaggcaatctggcagggttgatgatccgttctggtaaactggag
aacaagaaggtgattgattgcctctacacctgcaaagaggggctggatttgcagatggct
gatggtgttggcaaaggtgtgaagatccacatgaacccgagccagtcgatgctgaccata
gaaggggatgacatagacagagttgacaaggccatgcagcacatttcctacctgaactcc
cggcagttcccaacgcccggcattcggaggctgaagatcaccagcactgtcaggtgtttc
aatgaagaggcctgtgtctccattccctctgtggaggggtatgtcatggtcctgcagcca
gaggagccaaaaatcagcctgagtggcatcaaccactttgcccgctctgcctcagagttt
gagagctccgagggcgtttccctcttcccggagcttcgcataatcagcaccatcacccgg
gaggtggagcccgagggagatggggatgaagatcctacagtccaagagtctttggtatct
gaagagatcatgcacaacctggatatgtgtgaggtgacagttatgggagaggaactaaat
caggaacaagagagcctggagattgacatgacacgactgcagcagaaaggcattgagatg
agcagttccaacctgggcatgataatcacaggggtggacaccatggctaactacgaggag
gttctgcacctgatccgctacaggaactggcacacggcgtctctgttcgacagaaagttc
aaactgctctgctccgagctcaacggccgctacgtcagcaacgacttcagagtggaggtg
aatgttatccacacagccagcccagtggaacatgccaatcacattgctgcacagcctcag
ttcattcacccagtgcatcattcctttgttgatctctccggtcacaacttggcaaaccct
catcccttttcagttgtccccagcacagccacggtggtgatcgtggtgtgtgtcagcttc
ctggtgttcatgatcatcctgggcgtgttccgcatccgcgccgcgcaccagagaaccatg
agggaccaggacacgggcaaggagaacgagatggactgggatgactctgctctgaccatc
actgtgaaccccatggagacctatgaggatcaacacagcagtgaagaggaggaggaggag
gaggaagaagaaagtgaagatggagaagaagatgacatcaccagtgcagagtctgaaagc
agtgaggaggaagagggagagcaggaggaccaacagaatgttaacagacagcagcagctg
gaatgggatgactctaccctcagttattga
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