Parus major (Great Tit): 107213672
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Entry
107213672 CDS
T04864
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj00310
Lysine degradation
pmaj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107213672 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107213672 (PRDM2)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107213672 (PRDM2)
Enzymes [BR:
pmaj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
107213672 (PRDM2)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
107213672 (PRDM2)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
107213672 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
zf-C2H2_6
zf-H2C2_2
zf-C2HE
zf-C2H2_11
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
107213672
NCBI-ProteinID:
XP_015503850
Ensembl:
ENSPMJG00000010401
LinkDB
All DBs
Position
21:3025454..3092346
Genome browser
AA seq
1698 aa
AA seq
DB search
MNQNTTDAPVAVETLDDVPEHVLRGLPEDVRLFPSAVDKTRLGVWATKSILKGKKFGPFV
GDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPEKGNWLRYINWARSGKEQNLFPLEINR
TIYYKSLKPIAAGEELLVWYNGEDDPAIAAAIEEERASARSRRHSPKARRGKKKTQESKN
KGKKATDTKQKKTDLDSTSADMRDSKEGHKEEDETPSVSAVLSLEQTAVIQEMVNQDVLP
KLMIPSPTNEPQAVTEDKQGEAINCASDDLDDDEEEDEEEEDEEEIEDTNMPKENAEMPL
ICEEKLDFIEEQKSTSEESPESSPKKKLVVKIPKAQGESNGDVQETFMFPCQHCERKFTT
KQGLERHMHIHISTLSHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLTSSQHLD
NVADNQVVVDDGLKDDLNVSSLVQDSVVLDSEKVSQEMSNSAFAEENKEPKELHPCKYCK
KVFGTHTNMRRHQRRVHERHLIPKGVRRKGFFTEEPPLPTEPAPAVQSVYIASTEIEEEG
EGDDVYLMDISSNISENLNYYIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVTVE
ISSNLKVTQTHVNEPPKEPSSSGNSESKKRRTASPPLVPKIKTEIDPEPITPTSSLNLPL
SISTESLTFHKEKGVYLSSKLKQLLQTQDSKKITPSSEVPKIGPSVTASPILPPVSSRFK
RRTSSPPSSPQHSPVLRDFVKSEGKTVWNDNIRSSKMPKLESHSNSPAWSLTGREDKETL
SPLCFEEYKISKDWTAAPTFGNVCNQQPLDLSSGMKQRSDVKSKTQVPWESVLDLSVHKK
PCSDAEIRESKENSTQPTCSGVKKKKPTTCMLQKVLLNEYNGTDAAPESALGMDSAASPS
KALEPEAEPDADPALAASSSTDTQPLSSSDSPVPQASAAPAVCQLPPLLTPTNPPSPPPC
PPVLTVATSPPPLLPTMPLAIPDVSASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPSP
VPSVEPLISAASPGPPTLSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLESS
LPIIKQEEAESEQQKAREDPHTSSESGVVQETFNKSFVCNVCESPFLSIKDLTKHLSIHA
EEWPFKCEFCVQLFRDKRDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDK
ECTHHEFESGTLRPQNFTDPSKANAEHMQSLPEDSLEPSKEEEDEDLNDSSEELYTTIKI
MASGVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRC
TKCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGMVVIAGPGKNAFR
RMGQPKRLNFNVEISKMSSNKLKISALKKKNQLVQKAILQKKKSAQQKAELKNNPSETDS
HICPYCNREFTYIGSLNKHASYSCPKKPISPSSKKNSSKKSAASSPANSDKGSNQRRRTA
DAEIKMQSTQPHLGKTRARTSGPAQLQLPSASFKSKQNVKFVPSMRSKKPNSSSSLRNSS
PVRVSKMSHVDGKKTKVVSKNNSSGISSKASRKLHVRMQRNNKAVLPSKSAVASKKKADR
FSVKSRERIGGPITRSLQQAANAEAAENKRDESSTKQELKDFSYRLRVASRCPSSSSHNP
STRQCKKSSSTTSHFFKE
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacacaactgacgcccctgttgctgtggagaccttggatgatgttcctgag
cacgtgcttaggggccttcctgaggacgtgaggctcttcccatctgctgttgacaagact
cggcttggtgtctgggcaacaaagtcaattttgaaaggcaagaagtttggaccatttgtt
ggtgataagaaaaaaagatctcaagttaagagcaatgtgtacatgtgggaggtgtattac
cccaacctgggctggatgtgtgtggatgccactgacccagagaaggggaactggctgcgc
tacataaactgggcccgctcagggaaggaacagaacctctttcctctggagatcaacagg
accatttactacaagagtttaaagccaatcgcggcgggcgaggagctgttggtgtggtac
aatggcgaggacgacccggcgatagcggccgcgatcgaggaggagcgagcgagcgcccgc
agccgccggcactccccgaaggcccgcagaggaaagaagaagactcaggaaagtaaaaac
aagggaaagaaggcaacagatacaaaacagaaaaagactgatttggattctacttctgca
gatatgagggattctaaggagggtcataaagaggaagatgaaacaccttctgtttctgct
gtgctgtctctggaacaaacagctgtgattcaggaaatggtaaatcaagatgtacttcca
aagctgatgatccccagtccaaccaatgaaccacaagcagtaactgaagacaaacaagga
gaagcaataaactgtgcatcagatgatttagatgatgatgaagaggaggatgaagaagag
gaagatgaagaggagatagaagataccaatatgcctaaagaaaatgctgaaatgcctttg
atatgtgaagaaaagttggacttcatagaagaacagaagagtacatcagaggaatctcca
gaaagctctccaaagaaaaaactcgtggtgaaaattccaaaagcacagggggaatccaac
ggtgatgttcaggaaacattcatgtttccctgccagcattgtgagaggaagttcacaaca
aagcaaggactcgagcgccacatgcacatccatatatccaccctgagccacgcgttcaag
tgtcgatactgcgggaaggcctttggcactcaaatcaacaggcggaggcacgagcgacgc
cacgaggccgggccgaaaaggaaacccttcctgacactgacgtcgtcacaacacttggat
aatgttgctgataaccaagtggttgtggatgatggtcttaaagatgacctgaacgtttcc
agtcttgtgcaagattctgttgtcttggattctgaaaaagtttcccaggaaatgtcaaac
tctgcgtttgctgaggaaaataaggagcccaaagaattgcatccgtgcaaatactgcaaa
aaggtttttggtactcacaccaacatgcggaggcatcagcgtagggttcacgagcgtcat
cttattcccaaaggtgtcagaagaaaagggttctttactgaagagccacctctcccgaca
gagccggccccggcagtccagagtgtgtacatagcaagcacagaaatagaagaggaaggt
gaaggagatgatgtctatcttatggatatatccagcaatatctctgagaatttaaattat
tacattgatgggaaaattcagtccaacagcagtactagcaattgtgacgtgattcagatg
gaatccaactctgcggacttgtatggattgaattgtataatcagtccggtcacagtggaa
atttcctcaaatttaaaggttacacaaacacatgtgaatgaacctcctaaggaaccctct
agcagtgggaacagtgaatccaaaaagagaagaactgccagccctcctcttgtaccaaaa
ataaaaactgaaatagacccagaacctataactcctactagttctttaaatcttcctctt
agcatttcaacagaaagcttaacttttcataaagaaaaaggggtttatttgtcatcaaaa
ttaaagcagcttcttcagacacaggacagtaagaagataactccatcaagtgaagtccct
aaaataggaccttctgttacagcatcgcctattttgcctccagtatccagcagatttaaa
agaaggaccagctctcctcccagttctccacagcacagtccagtgcttcgagactttgtc
aaatctgaggggaaaactgtgtggaatgataatattcggagttcaaaaatgccaaagtta
gaaagccacagcaattcacctgcttggagcttgactggaagggaggacaaagagactttg
agccctctttgctttgaagaatataaaatatcaaaagactggacagcagctccgactttt
ggcaatgtgtgcaaccagcagccactggatttatccagtggtatgaaacaaaggtctgat
gtcaaaagcaagactcaggttccctgggaatccgttttagatctaagtgtgcataagaaa
ccttgcagcgatgctgaaattagggaatccaaagaaaattccacacagccaacgtgtagt
ggtgttaagaagaagaaacccaccacttgcatgttgcagaaggttctgctgaacgagtac
aacgggacggatgcggccccggagagcgcgctgggcatggacagcgccgccagccccagc
aaggccctggagcctgaggcagagcccgacgcggatcccgctctcgcggcgtcgtcttcc
actgacactcagcccctcagctcctccgattcccctgtgccacaggcgtctgctgcgcct
gccgtgtgccagctgcctccattgttaacgcccaccaaccccccgtccccgccgccctgc
ccgcccgtgttaacggtggccacctcacctccccccctgctcccaacgatgcccttggca
attccagatgtctctgccagtgccactaacacttcctcctgtccctcgccgctctccaac
accaccacccagtccccactgccagttctttcacctacggtttctccttctccatcccct
gtcccttctgttgaacctcttatttctgctgcttcgcctggcccccctacactgtcttct
tcgtcttcctcctcctcttcctcttctttctcatcctcttcttcctcatcatctccgtct
ccacctcctctttctgtagtttcttctgttgtttcctctgctgataaccttgaaagttct
ctcccaataataaaacaggaagaagctgaaagcgagcagcagaaagcaagagaagatcct
catacttcaagtgaatcaggagtagtgcaggagacgttcaacaagagctttgtgtgcaat
gtctgcgaatcaccttttctttccattaaagacctaacgaagcatttatccattcatgct
gaagaatggcccttcaaatgtgaattctgtgtacagctttttagggataaaagagacttg
tccgaacatcgctttctgcttcacggagtagggaatatctttgtttgttcagtgtgtaaa
aaggaatttgcttttttgtgcaatttgcaacagcatcagcgggatctccatccagacaaa
gagtgcacacatcatgagtttgaaagtgggactttgagaccccagaattttactgacccc
agtaaggcgaacgcagagcacatgcagagccttccagaagattctttggaaccttcaaaa
gaggaggaagatgaagatctaaatgattcttctgaagagctttatactactataaaaata
atggcttctggagtgaaatctaaagatccagatgttcgtatgggcctcaatcaacactac
ccaagctttaaaccacctccgttccagtatcaccatcgtaatcctatgggtattggagtt
actgcaacaaacttcacaacccacaatatcccacagacttttactactgccattcgatgc
acaaaatgtggaaaaagtgttgataacatgcctgagttacacaaacacatactggcctgt
gcatctgctagtgataaaaagagatacacacctaaaaaaaacccagtacccctcaaacag
acagtgcagcctaagaatggcatggtggttattgctgggcctgggaagaatgccttcaga
cgaatgggtcagcctaaaagactcaatttcaatgttgagattagcaaaatgtcctccaat
aaactaaaaataagtgcattgaaaaagaaaaaccagcttgtccagaaagctatcctgcaa
aaaaagaaatctgcccagcagaaggcagaattgaaaaataacccatctgagacggactct
cacatctgcccctactgtaacagagagttcacttacattgggagtttgaacaaacacgcg
tcgtacagctgccccaaaaaacccatttccccctcctccaaaaagaattcttccaaaaaa
agtgcagcttcttcacctgcaaacagtgacaaaggcagcaaccagcgcaggagaacagca
gatgcagaaatcaaaatgcagagcactcagcctcacctgggcaagacgagagcgcgaacc
tcaggacctgcacagctccagctcccctctgcctccttcaagtccaaacaaaacgttaaa
tttgtaccttccatgcgatctaaaaagccaaattcatcttcatcgttgaggaactctagt
cctgtaagagtgtctaaaatgtcccatgttgatgggaaaaaaactaaggtggtttctaag
aacaattcctctggaatctccagcaaagcgtcccggaaattgcacgtcagaatgcaaagg
aataataaagcagttttgccaagtaaatctgctgtggcaagtaagaaaaaggcagacagg
ttcagtgtaaaatctagagagaggattggaggaccaatcacacggagcctgcagcaggca
gcaaatgcagaggcagcagaaaacaaaagagatgaaagcagtacaaagcaagagctaaaa
gatttcagctacaggctccgtgtggcctctagatgtccttcctcctcctcgcataacccc
agcaccaggcagtgcaagaaatccagctccaccacatcccacttcttcaaggaatag
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integrated database retrieval system
