Parus major (Great Tit): 107213757
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Entry
107213757 CDS
T04864
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107213757 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107213757 (EXOSC10)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
107213757 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
107213757
NCBI-ProteinID:
XP_015504024
Ensembl:
ENSPMJG00000003115
LinkDB
All DBs
Position
21:complement(2232121..2246418)
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AA seq
900 aa
AA seq
DB search
MAAAAREESPPVRPGTSWMPAGTEGSSTMSTLPGFDNPDAFVKYALGTVVAATKASNGLP
QPGDEYDFYCSFPGFRAYCSTQGDRLLHCMSQVMQYHGCRSLMKDSSKVTGLEDKFDMLV
DSNDVILERVSILLDEAAGVNRNKQPVMPAGLQPPQMIVSSWNRKAGEFHKRTQSETFRL
LHAKNISRPQLKFREKIDNSNTPFVPKLFVKPNALKPLPEALTKSGRQRKERPEDLDVPA
ALADFIHQQRTQKTEQDMFAHPYQYELEHFSPPDEVLKKPELQMYRPIAETPCHFITTLD
ELVELNEKLMTCKEFALDLEHHSYRTFLGLTCLMQISTRTEDFIIDTLELRSDMSILNET
FTDPAIVKVLHGADSDVEWLQRDFGLYLVNVFDTHQAARLLNLGRHSLDHLLKLYCSVDA
DKKYQLADWRIRPLPEEMIRYARDDTHYLLYIYDKMRELLWERGKEQPTQLQVVWQRSRD
ICLKKYIKPLFTDESYLDLYRRQKKHLDTQQLAAFRLLFAWRDKIARQEDESTGYVLPNH
MLLKISEELPKETQGIIACCNPVPPLVRQQIHELHLLIQQAREMPLVKSEAISAVKKRAA
LPNPEKLENALFGPHDSSRIPMDNFQNNSALDPAPVLEDVCLFSESERTVDIQDTQPESE
STCLVAISTVSIFSECDENEGNKRTLTTAQRKAQLIMESFENPFKMFLPPEENSAYVSQS
AKFDPSSKIYEISNRWKLMSQAPVQKKSKNETNTKAAQQSAAHVQTQKLHKKAAQNVVSV
RQQAMEEQANRKRERDRSEMGAETGAELPAQEKKRQKTPQKPEELEAPRQFTPFDYSNSN
LKVFAGSSKSKQSPQFDPAKQAYTGKKFAGGNKLQQSGNRSMSYLAGKAERGSTHHWPKR
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccgcccgtgaggagagcccgccggtgcggccgggcacctcttggatgccc
gcgggcactgagggaagcagcacgatgtcgaccctgcccgggttcgacaaccccgacgcc
ttcgtcaagtacgctctcggcacagtggtggcagcaacaaaagcatctaatgggcttccc
cagcctggtgacgagtatgatttctactgcagcttccctgggttccgtgcatactgcagc
acacagggagaccgcctgctccactgcatgagccaggtgatgcagtaccatggctgccgg
agcctcatgaaagattccagcaaagtgacggggctggaagataaatttgatatgctggtg
gactccaatgatgtcattcttgaaagagtgagtattttattggatgaagcagcaggagtg
aacagaaacaagcagccagttatgccagctggattacagcccccacagatgatcgtttcc
agctggaaccgtaaggcaggagaattccacaaaagaactcagtctgaaacattccgacta
cttcatgccaaaaatatttctcgaccacagcttaagtttcgtgaaaagattgacaattcc
aacactccctttgtacctaaactttttgtcaaaccaaatgctttgaagcctttgcctgaa
gcccttacaaaaagtggacggcagagaaaggagcgccctgaggacttggatgtgccagct
gctttggcagacttcatacatcagcagaggacgcagaaaactgagcaagacatgtttgct
cacccttaccagtatgaactggagcatttttctccaccagatgaagttctcaagaaacct
gaactccagatgtacaggcccattgcggaaacaccctgtcattttatcaccacactggat
gagctggtagaactaaatgaaaagctgatgacttgtaaagaatttgccttggacttagag
caccactcctacaggaccttccttggcttgacatgtctgatgcagatttccacccgaaca
gaagacttcatcattgacacactggaactccgcagtgacatgagcatcctcaatgagacc
ttcacagaccctgcaattgtgaaggtccttcatggtgctgattcagatgtggaatggctg
cagagagactttggtctgtacttggtgaatgtgtttgatactcaccaagctgctcgtctc
ctcaaccttggcagacattctttggaccacttgctaaagctgtattgcagtgtagatgct
gacaagaagtaccagctggctgactggaggatacgccctctgccagaagaaatgatccgc
tatgcccgtgatgacactcactacttgctttacatctatgataaaatgagggagctgctg
tgggagagggggaaggagcagcccacacagctgcaggttgtgtggcagcgcagcagggac
atctgcctgaagaaatacatcaagcccctctttacagatgaatcctaccttgatctctac
aggaggcagaaaaaacaccttgatacccagcagctggcagcatttaggctgctgtttgca
tggagagacaagatagcacgtcaagaggacgagagcacaggatacgtgctaccaaatcat
atgctgttgaagatttcagaggagctgcccaaagaaacccagggtatcattgcttgctgt
aaccctgtcccaccacttgttcgccagcagattcatgaattgcacctgctcattcagcag
gcccgggaaatgcctcttgtcaagtcagaagctatttcagcagtcaagaagagagcagct
ctacccaaccccgagaagctggagaatgctctctttggaccacatgacagttcacggatt
cctatggataattttcagaataactctgccttggaccccgcaccagttttggaagatgtt
tgtctcttttcagagagtgaaaggacagtggatattcaagatactcagccagagtctgag
tcaacctgtcttgttgctattagcactgtcagcatattcagtgaatgtgatgaaaacgaa
ggaaataagaggactttaaccactgcacagcggaaagctcagctaataatggagtccttt
gaaaatccatttaaaatgtttctgcctccagaggagaattctgcctatgtctcacaatct
gcaaagtttgacccatcatctaaaatttatgaaatcagcaatcgatggaagctgatgagt
caggcaccggtacagaagaagtccaagaatgaaaccaacacaaaagcagcccagcaatca
gctgcccatgtccagacacagaagttgcataaaaaagcagcacagaacgttgtatctgtt
cgtcagcaagccatggaggaacaagcaaataggaagagggagagagacagaagtgaaatg
ggagcagaaacaggagcagagttgccagcacaagaaaagaaacgacaaaaaaccccccag
aaaccagaggagctggaagcaccgaggcagtttaccccctttgattacagcaattccaac
ttgaaagtgtttgcaggaagcagcaaatcaaaacagtctccacaatttgatcctgccaag
caagcttacacaggcaagaaatttgctggaggtaacaaacttcaacagtctgggaaccgg
agcatgtcctacctggcagggaaagctgaaaggggttccacgcatcactggccaaagaga
taa
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