Parus major (Great Tit): 107213804
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Entry
107213804 CDS
T04864
Symbol
TIA1
Name
(RefSeq) nucleolysin TIA-1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107213804 (TIA1)
03041 Spliceosome [BR:
pmaj03041
]
107213804 (TIA1)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107213804 (TIA1)
Spliceosome [BR:
pmaj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
107213804 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_Nup35
RRM_7
Calcipressin
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
107213804
NCBI-ProteinID:
XP_015504116
LinkDB
All DBs
Position
22:complement(790563..803380)
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AA seq
242 aa
AA seq
DB search
MATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPPAPKSTYETSTKQL
SYDEVVTQSSPSNCTVYCGGVTSGLTEQLMRQTFSPFGQIMEIRVFPDKGYSFVRFNSHE
SAAHAIVSVNGTTIEGHVVKCYWGKETPDMVSPVQQGQLSYPPAYGQWGQWYGGAQLGQY
VPNGWQVPAYSVYSQAWNQQGFGQSQSSAPWMGPAYGVQAAQGQNGAALPPQPGFRVGFE
TP
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggccacgggcaagtccaagggctacggcttcgtctccttcttcaataaatgggacgcc
gagaacgccatccagcagatgggggggcagtggctcgggggccggcagatccggaccaac
tgggccaccaggaaacctccagctcccaagagcacctatgagacaagcaccaaacaattg
tcctacgacgaggtggtgactcagtccagccccagcaactgcaccgtgtactgcgggggg
gtcacctcgggcctcacagagcagctgatgcgccagaccttctcccccttcgggcagatc
atggagatccgagtgttcccggataaaggatactccttcgtcaggttcaattcccacgag
agcgctgcccacgccatcgtctccgtcaacggcaccaccatcgagggccacgtggtgaag
tgttactggggcaaggagacacccgacatggtcagccctgtccagcagggccagctgagc
tacccgccggcctacgggcagtggggacagtggtacgggggagcccagctgggccagtac
gtgcccaacggctggcaagtgcctgcctacagtgtctacagccaggcctggaaccagcag
ggctttgggcagagccagtcgtcagccccgtggatgggccccgcttacggcgtgcaggcg
gcgcaggggcagaacggcgccgcgctgccgccccagcccggcttccgcgtgggcttcgag
accccctga
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