Parus major (Great Tit): 107214032
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Entry
107214032 CDS
T04864
Symbol
WDTC1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pmaj04121
]
107214032 (WDTC1)
Ubiquitin system [BR:
pmaj04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
107214032 (WDTC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
TPR_17
Beta-prop_WDR75_1st
TPR_19
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
TPR_2
TPR_1
Beta-prop_HPS5
ANAPC3
TPR_11
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
TPR_6
NBCH_WD40
TPR_16
Beta-prop_SCAP
Barstar
Motif
Other DBs
NCBI-GeneID:
107214032
NCBI-ProteinID:
XP_015504528
Ensembl:
ENSPMJG00000018425
LinkDB
All DBs
Position
23:469419..495009
Genome browser
AA seq
670 aa
AA seq
DB search
MLGCTAALPTASLRLPHCKKMAKANITRDIIHRQIKERGALGFERHYHVTDPFIRRLGLE
AELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLP
HSGDRILITGAADSKVHVHDLTVKETVHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIR
QYDLRENSKRSEVLIDLTEYCGQLVEAKCLTVNPQDNNYLAVGASGPFVRLYDIRMIHNH
RTNNYGPVLSTGHLPVKLPDYNNRLRVLVATYVTFSPDGTELLVNMGGEQVYLFDLTYKQ
RPYTFLLPKKCHTSGEVQNGKTSTNGVSNGIHLHSNGFRLAEGRAHVSPQVELPPYLERI
KQQANEAFACQLWTQAIQLYSKAVQKAPNNAMLYGNRAAAYMKRKWDGDHYDALRDCLKA
ISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALDRDINAALFS
KSDNAEDKKGGGPIRLRATGRKDSISEDEMVLRERSYDYKFRYCGHCNTTTDIKEANFFG
SNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSGIDPVVRLW
NPRPESETLNGRVVVDMEGASQANQRRMNADPLEVMLLNMGYRITGLTSGGAGGSDDEDS
SEGQVQCRPS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcttggatgcacagcagctcttcccacagcttctcttcgtctgccccactgcaagaag
atggcaaaagccaacatcaccagagacatcatccacaggcagatcaaggagaggggagcg
ctgggcttcgagcgccactaccacgtcaccgaccccttcatccgccgcctggggctggag
gctgagctgcagggtcactctgggtgtgtcaactgtctggaatggaatgaaaaaggagac
ttgttggcctctggctctgatgaccagcataccattgtgtgggatcctctgcaccacaag
aaactcctctctatgcacacaggacacactgcaaacatcttttctgtcaagttcttgccg
cactcgggggatcggatcctcatcactggagctgcggattccaaggtgcacgtccatgac
ttgactgtcaaggagactgtgcacatgtttggagatcacaccaacagggtgaagcggatt
gccacggctcccatgtggccaaacaccttctggagtgcagcagaagatggcttaatcagg
cagtacgacctgcgggagaacagcaaacgctccgaggtgctgatagacctgacagagtac
tgtgggcagctggtggaggccaagtgcctgacagtgaacccccaggacaacaattacctg
gccgtgggggccagcgggccctttgtgcggctctacgacatccgcatgatccacaaccac
agaaccaacaattatgggcctgtcctctccacagggcacctcccagtgaagcttccagac
tacaacaaccggctgagggtcctggtggccacgtacgtcaccttcagccccgacggcacc
gagctcctggtcaacatgggaggggagcaggtctatttgtttgatctgacatacaaacag
cgcccatacacttttctcctcccaaagaagtgccacacttcaggggaagtgcagaatggg
aaaacctctaccaatggagtgtccaacgggatccatctccacagcaacggcttccgcctg
gccgagggaagggcacacgtgagcccccaggtggagttgcccccgtacctggagaggatc
aagcagcaagccaatgaggcctttgcctgccagctgtggacccaggccatccagctgtac
agcaaagctgtgcagaaggcccccaacaacgccatgctctatgggaacagagctgctgcc
tacatgaagcgcaagtgggatggggaccactacgatgctctgagggactgcttgaaggcc
atttccctaaatccctgccacctgaaggcccatttccgcctcgcccgctgcctctttgaa
ctcaagtacgtggcagaagcactggagtgtctggatgactttaaagggaagtttccagaa
caagcacacagcagtgcctgcgatgcactagacagggacatcaatgctgctctcttctcc
aagagtgataacgctgaagacaagaaggggggtggccccatccggctgcgagccacgggc
cgcaaggactccatctctgaggacgagatggtgctgagggagcgcagctacgactacaaa
ttccgctactgcggccactgtaacaccaccacagacatcaaagaggccaatttctttggc
agcaacgcccagtacatcgtcagcggctcggatgatggctccttcttcatctgggagaag
gaaaccaccaacctggtgcgtgtgctgcagggagacgagtccattgtgaactgtctgcag
cctcaccccagctactgcttcctggccaccagcggcattgacccggtcgtgcggctctgg
aaccccaggcccgagagtgagaccctcaatggccgcgtggtcgtggacatggaaggtgct
tcccaagccaaccagcggcggatgaacgcggacccgctggaggtgatgctgctcaacatg
ggctaccggatcacgggactgaccagtggcggggctggaggctcagacgatgaagacagc
tcagaggggcaagtccagtgccggcccagctaa
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