Parus major (Great Tit): 107214167
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Entry
107214167 CDS
T04864
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107214167 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107214167 (ARID1A)
03021 Transcription machinery [BR:
pmaj03021
]
107214167 (ARID1A)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107214167 (ARID1A)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Helix-turn-helix
ARID
107214167 (ARID1A)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107214167 (ARID1A)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107214167 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
107214167
NCBI-ProteinID:
XP_033375514
Ensembl:
ENSPMJG00000018411
LinkDB
All DBs
Position
23:303557..337083
Genome browser
AA seq
1890 aa
AA seq
DB search
MDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQATQRYPMAMQSRTQSTMG
SISYAQQMPPYGQQGPGAYGQQSQTPYYNQQSPHPQQQQPPYPQQPPAQPSHSQPSYQQQ
QQQQQQQQQQQQAAQPPAPALPSAQPAYSQQQQQQQQQPPSPYPQQPAPQHPQSQPPYPQ
QQSQSPYQQQQAQQPAAPSGLAQPSSSYAPAQPPQQPSAYSQQRFPPPQELSQDSFGSQA
SSAPSMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQ
SNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQS
DTILHPSMNQSSIAQDRGYLQRNPQMPQYSSPQPGSALSPRQSSGAQMHAGMGPYQQNSM
GSYGPQGGQYGPQGGYPRQPNYNAMSNASYPSPGMGGSINPLHGQSGVPPYSGLPPGRMG
HAAMGSRPYGPNMGSIPPQVGSGMCPPPAGMNRKAQEAAAAAMHAAANSIQNRPPGYPNM
NQGGMMGTGAPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGDVKLTPA
TKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKLWVDRYLAFTEEKAMGM
TNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQ
CLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGG
DLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSD
MMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQHY
SYGAPYDRVRTEPGMGAEGSLGSGTPQPSILPSTPESGMYSPSRYPQQQQQQQRHDSYGN
QFSTQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGLPAKRHEGELYNVPYSSGQAQPQ
QQLPPAQPQQPSQQPPAQPSPQQDLYNQYGSTYPAERRAGQSQFPFQFGRERVSAGAGAQ
QNIPPQMMGGPIQPAPEGPQQGALWQGRNELGYGSYPNRQSSGAAPQGPAYHGVARTDEI
LHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPAPLP
RPLENRTSPSKSPFLHSGMKMQKAGPPVPASHIAPAAVQPPMIRRDITFPPGSVEATQPV
LKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGL
LELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSPEEGEEDDEPRSLNC
EEEEEDEEEEEAAFSSKDKVPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGRVQE
FDSGLLHWRIGGGDTTEHIQTHFESKTELPLPHKRASCSSALRKRSAAESNPSPREGEAP
APDGSSEKRITATMDDMLSARPGSLAGEEEEVKASETAKESSKFPFVISPAQSHRNIKIL
EDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILGKLI
LLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSP
YPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDLI
LATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNL
LGFLEDSLAATQFQQSQAGLMHMQSPPFEATSVDMMRRAARALLALAKVDENHSEFTLYE
SRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatggggaagatgaggcctcagccctacggagggaacaacccctacacgcag
cagcaggggccgcaggcggggccgcagcagggccacggctaccccgggcagccctacggg
ccccaggccacgcagagataccccatggcaatgcagagcaggacacagagcaccatgggc
agcatctcctatgcacagcagatgcctccgtacgggcagcagggccccggcgcgtacggg
cagcagagccagactccctactacaaccagcagagccctcacccgcagcagcagcagcct
ccctaccctcagcagcctccagcacagccttcgcactcccagccctcgtaccagcagcag
cagcagcagcagcagcagcagcagcagcagcagcaggcggctcagcccccggcgccggcg
ctgccctcggcgcagccggcgtactcgcagcagcagcagcagcagcagcagcagcccccc
agcccgtacccgcagcagccggccccgcagcacccccagagccagcccccctacccgcag
cagcagtcccagtcgccgtaccagcagcagcaggcgcagcagcccgcggccccctcgggg
ctggcccagccctcctcgtcgtacgcgccggcgcagccgccgcagcagccctcggcctac
tcccagcagcgcttccccccgcctcaggagttatctcaagactcgtttgggtcccaggca
tcctctgctccctcaatggcttccagtaaagggcaagaagacatgaacttgaatcttcag
tccagaccttccagcctgccggacctgtctggttccatagatgacctgcccatggggacc
gaaggagccctgagccctggagtaagcacatcagggatttccagcagccaaggagagcag
agtaacccagctcagtctcctttctcgccacatacctctcctcacctgccaggcatcaga
ggaccctccccgtccccagttggatctccagccagcgttgctcagtcccgctccggcccc
ctctcccctgctgcagtcccaggcaatcagatgcctccccgcccgcccagcggccagtcg
gacacgatcctgcacccctccatgaaccagtcgagcatcgcgcaggaccgagggtacctg
cagaggaacccccagatgccccagtacagctccccccagcccggctcagccttatccccc
cggcagtcctcgggagcacagatgcacgccggcatggggccctaccagcagaactccatg
gggagctacggaccccagggcgggcagtacggacctcaaggaggttaccccaggcagccc
aactacaacgccatgtccaacgccagctaccccagcccgggcatggggggcagcatcaac
cctctgcacgggcagagcggggtgcccccgtacagcgggctgcccccgggcaggatgggc
cacgcagccatgggcagccggccctacggccccaacatgggcagcatccccccccaggtg
ggcagcggcatgtgccccccgcccgccggcatgaaccgcaaggcgcaggaggccgccgcc
gccgccatgcacgccgcagccaactccatccagaacaggcctcctggttatcccaacatg
aatcaggggggaatgatgggcactggagctccttacgggcaggggattaacagcatggct
ggcatgataaacccccagggcccaccctaccccatggggggaaacatggccaacaactct
gcagggatggcagcaagccctgaaatgatgggactcggggatgtcaaattaacacctgca
actaaaatgaacaacaaggcagatgggacgcccaaagcagaatccaagtcaaagaagtcc
agttcctctaccacaaccaacgagaagatcaccaaactgtacgagctgggcggggagccc
gagaggaagctgtgggtggatcgttacctggccttcaccgaggagaaggccatgggcatg
accaacctgccagccgtgggcaggaagcccctggacctgtacaggctctacatctccgtc
aaggagatcgggggattgactcaggtcaacaaaaacaagaagtggcgtgagctggccacc
aacctgaacgtgggcacgtcgagcagcgcggccagctcgctgaagaagcagtacatccag
tgtctgtacgccttcgagtgcaagatcgagaggggagaggacccccctccagacatcttt
gcagctgctgattcaaagaagtcccagaccaagatccaacctccatctccagcgggttca
ggctccatgcagggcccccagacacctcagtccaccagcagctccatggcagagggagga
gacctgaagccaccaactccagcatcgacgccacacagtcagatgccccctttgccaggc
atcaggagtaactccgtgggccttcaggacgcctttgcagacggcagtgatcccacgttc
cagaaacggaactccatgactccaaatccagggtaccagcccagcatgaatacctctgac
atgatgggtcgcatgtcttacgagccaaataaagatccttacagcagtatgaggaaagct
ccaggaagcgatcccttcatgtcctcagggcagggccccaacagtggcatgggtgaccct
tacaaccgcgccgccggccccggcatgggcaacatggccatggggcagcggcagcactac
tcctacggagcgccctacgaccgagtcaggacggagcccgggatgggagccgagggcagc
ctgggcagcgggaccccccagcccagcatcctgccctccacgcccgagtcgggcatgtac
tcgcccagccgctacccccagcagcagcagcagcagcaaagacatgattcctatggcaat
caattctccactcaaggcacatcctcgggcagccccttccccagccagcaaaccaccatg
tatcagcagcagcagcagaactacaagcggccgatggacggcagctacggcctccccgcc
aagcggcacgagggcgagctctacaacgttccctacagctcagggcaggcccagccgcag
cagcagctgcccccggcgcagccgcagcagcccagccagcagccgccggcgcagccctcg
ccgcagcaggacctgtacaaccagtacggcagcacctaccccgccgagcgccgcgccggc
cagagccagttccccttccagttcggcagggagcgggtctcggccggcgccggagcccag
cagaacatccccccgcagatgatggggggccccatccagccggccccggagggtccccag
caaggggccctgtggcagggcaggaacgagctgggctatggaagttaccccaaccggcag
agctcgggcgcggcgccccagggccccgcctaccacggggtggctcgaacagatgaaatc
ctgcattcagaccagagggtcaaccacgagggaccatggccttcccacgggaaccggcaa
cccccctacggcccctccgcccccgtgccccccatgaccaggcccccccagtccaactac
cagaccccccccagcatgcagaatcacattcctcaggtatccagcccagcacctctgccc
agacctctggagaaccgcacttctcccagtaaatccccgttcctgcactcggggatgaag
atgcagaaggcggggccgcccgtgcctgcctcgcacatcgcaccagcagctgtccagcct
cccatgatccgacgggacatcaccttcccgccgggctccgtggaagccacgcaacctgtg
ctcaagcagaggaggcggctgacggcaaaagatatcggaactcctgaagcctggagagtg
atgatgtctctgaagtcggggctgctggctgaaagtacgtgggccttagataccataaac
atcctgctctatgatgacaacagcataatgaccttcaacctcagccagctgccaggcttg
ctggaactcctggtggaatatttccggcgctgcctgatcgaaatctttggaatcctgaag
gaatacgaggtaggagacccagggcaaagaacactattagatcccgaaaggttctgcaaa
tcctcagcttcctcccctgaagaaggggaggaggacgatgagccacggagcctgaactgt
gaggaggaagaggaggatgaggaagaggaggaggctgcgttttcgagcaaggacaaagta
cctctagagagcagcgaggagaagctagtgagtaaattcgacaagcttccagtgaaggtg
gtgcagaagaacgaccccttcgtggtggattactcggacaagctgggccgggtgcaggag
ttcgacagcgggctcctgcactggcgcatcggcggcggggacaccaccgagcacatccag
acacacttcgagagcaagaccgagctgcccttgcctcacaaacgagcttcctgctcctct
gccttgaggaaacgttcagcagccgagagcaacccgagccccagggaaggggaggctcct
gcgcccgacggctcctcggagaagaggataacggccaccatggacgacatgctgtcggcg
cgcccgggatccctggcaggggaggaggaagaggtcaaagcttcggaaacggcgaaggag
agcagcaagtttccctttgtcatcagtccagctcagagccacagaaatataaaaatcctg
gaggacgagccccacagtaaggacgagacgccgctctgcaccctcctggactggcaggac
tctctggccaagcgctgcatctgcgtctccaacatcatcaggagtttatcgttcgtgccg
ggcaatgactttgaaatgtccaaacaccccgggctgctgctgattctagggaaactgatt
ctcctacaccacaagcatccagaacgcaaacaggcccccctgacctacgagaaagaggag
gagcaggaccaaggggtgagctgcaacaaggtggagtggtggtgggactgtttggagatg
ctgcgtgaaaacacactggtcacgttggccaacatttctgggcagctggacctctcccct
tacccggaaagcatctgtttgcctatcctggatggactcctccactgggcagtgtgtccc
tcggcagaggcccaggatccttttccgacactgggacccaacgctgtcctctcccctcag
agactggttttggaaacactcagcaaactcagcatccaggacaacaacgtggatttgatc
ctcgccacgcccccgttcagccgcctggagaagctgtacagcaccatggtgcggttcctc
agtgacagaaagaacccggtgtgccgggagatggccgtggtgctgctggccaacctggcc
cagggggacagcctggccgccagagccattgccgtgcagaagggcagcattggcaacctg
ctgggcttcctggaggacagcctggccgccacgcagttccagcagagccaggcagggctg
atgcacatgcagagcccgcccttcgaggccaccagcgtggacatgatgcgccgcgccgcc
cgcgcgctgctggccctggccaaggtggacgagaaccactcggagttcaccttgtacgag
tcgcggctcttggacatctccgtgtcgcctttgatgaactctttggtttcacaagttatt
tgtgatgtactgtttttaattggccagtcatga
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integrated database retrieval system
