Parus major (Great Tit): 107214199
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Entry
107214199 CDS
T04864
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03013
Nucleocytoplasmic transport
pmaj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107214199 (SRRM1)
03015 mRNA surveillance pathway
107214199 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107214199 (SRRM1)
03041 Spliceosome [BR:
pmaj03041
]
107214199 (SRRM1)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107214199 (SRRM1)
Spliceosome [BR:
pmaj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
107214199 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
107214199
NCBI-ProteinID:
XP_015504834
Ensembl:
ENSPMJG00000000218
LinkDB
All DBs
Position
23:complement(1119140..1136542)
Genome browser
AA seq
900 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
TAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDKDNREKRDRSRSPRRRKSRSPS
PRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEATPEPEPSVKPKETVVQEATSNS
DIPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRSPTRSKSRSRSRSRSPSHSRPR
RRHRSRSRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSS
SRSRSPPKKPPKRPVSSPPRKTRRLSPSASPPRRRHRPSPPGSPLGKPRRSPTPQQSNRA
RKSRGSVSPSRASAPKHKSTEKRESPSPAPKPRKAELSESEEDKGGKMAAADSVQQRRQY
RRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHSHSRSPSPSPRKRQKESSPRMQ
MEKRWQSPVMKSSRRRRSPSPPPARRRRSPSPAPPPRRRRSPSPPRRRSPSPPPRRRSPS
PRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQSKRRVSHSPPPKQRSSPTAKRR
SPSVSSKHRKGSPPSRSNRETRSPPQNKRHSPSPRPRASHPSSSPPPPRRGASASPQRRQ
SPSPSTRPIRRVSRTPEPKKTKASTPSPRRVSSSRSASGSPETAPKKHQGPASPARSRSP
SANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAAVA
AAAATVAAPDTTSVQEDQEAETEPKKETESEPEDNLDDLEKHLREKALRSMRKAQVSPPS
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgggttcttccgcggaaccagtgcagagcaggacaatcgcttcagcaacaag
cagaagaagctgttgaagcagttgaagtttgcagaatgcttagaaaagaaggtggacatg
agcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatcctt
ggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaaccca
gattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagggag
ttcatgggagaactgtggccactgctattaagtgcacaagaaaacattgctggtattcca
actgcatttctggaactgaagaaagaagaaataaaacagcgacagatagagcaggagaaa
ctggcttccatgaagaaacaagatgaagacaaagagaagagagataaggaggacaaagac
aacagagagaagagagacagatccaggagtccaagaagacgcaagtcccgctctccctcc
ccgcggcggaggtcgtcgcccgtgcgccgcgagcgcaagcgcagccactcccgctcgccc
caccaccgcaccaagagccgcagtgccacccctgcccccgagaagaaagaggccactccc
gagcctgagccctccgtgaaaccaaaggagactgttgtgcaagaggcaacttcaaacagt
gacatcccgaaagctcctaaacctgaacctcctgtaccagagactaaggaaacttcacca
gaacgtaattcaaagaaggagagagagaaggagaaggagaagactcgtcagagatcccca
actcggtccaagtccaggtcaagatcccgatcccgttctccatctcattctcgacccaga
aggcgccatagatcacggtcaagaaggcgacccagcccgcggcgccggccatccccgcgc
aggaggagcccgccccggagaatgccacccccacccaggcacaggaggagcagatccccc
gtgaggcggagaagacgctcctcggcctcgctgtccggcagcagctcctcgtcgtcgtcg
tcgcgctcccgctctccaccaaagaagcctcccaagagacccgtgtccagccctccccgc
aaaacgcgccggctgtcgccctcggccagtcccccccggcgccgccaccggccctcgccc
cccggcagccccctgggcaaaccgcgccgctcgcccacgccgcagcagtccaaccgcgcc
cgcaagagccgcggctccgtctcacccagcagggcttcagcacccaaacataagagtact
gagaaaagagaatctccttcgccagcgcccaagcccaggaaagcagaattgtcggaatca
gaagaagacaaaggaggcaaaatggctgcagcagattctgtccaacagaggcgccagtac
aggaggcaaaatcaacagtcttcatctgattctggttcttcatcttcctcagaggaggag
aggcccaagaggtcgaatgtgaagaacggggaggtgggcaggcgccgccggcactcgcac
tcgcgcagcccctcgccttcgccccgcaagcgccagaaggaatcctccccccggatgcag
atggaaaagaggtggcaatcaccagtgatgaaaagcagcaggaggaggaggagcccctcg
ccgccccccgcgcgccggcgccgctccccttccccggccccgccgccccggcgtcgccgc
tcgccgtccccgcctcgccgaaggtctccatcaccacccccgcgcagacgttctccctct
ccacggagatactcccccccgatccagaggcgatattccccatctccccctcccaagagg
agaacagcttctcctcctccccctcccaaaagaagggcctccccttccccccagtccaag
cgcagagtctcccactccccaccgccaaaacagaggagctcccctactgctaaacggcgc
tccccttccgtatcttccaagcacaggaaggggtctcctcccagcagatccaacagggaa
acacgttctccaccacaaaacaaaaggcattcaccttcaccacggcctcgagcttcccac
ccctcctccagccctccgccgccgcgccggggagcgtcggcgtcgccgcagaggaggcag
tcaccctcacccagcaccaggcccatcaggagggtgtccagaacaccagaacccaagaaa
acaaaggcttccacccccagcccccggcgcgtgtcctcgtcccgatctgcgtcagggtca
cctgagacagctcccaaaaagcaccaaggacctgcatctcctgcccggtctcgctctcct
tctgcaaactggtcacctgcaaaaaaggccaagagcccaactcagagcccatcacctgcc
aggaattcagatcaagaaggtggtggcaagaagaagaagaaaaagaaggataagaagcat
aaaaaggataaaaagcacaagaaacacaaaaagcataagaaggagaaggcagcagtggct
gcagcagctgctactgtggctgcaccagacaccacctcagtacaggaagaccaggaagca
gagacagaacccaaaaaggagacagagagtgaacccgaggacaacctggatgacctagaa
aagcacctgcgggagaaggccctgaggtccatgaggaaggcgcaggtgtcccccccctcc
tag
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