Parus major (Great Tit): 107214202
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Entry
107214202 CDS
T04864
Symbol
AHDC1
Name
(RefSeq) AT-hook DNA-binding motif-containing protein 1
KO
K22592
AT-hook DNA-binding motif-containing protein 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107214202 (AHDC1)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107214202 (AHDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
Motif
Other DBs
NCBI-GeneID:
107214202
NCBI-ProteinID:
XP_033375487
LinkDB
All DBs
Position
23:complement(576860..597062)
Genome browser
AA seq
1645 aa
AA seq
DB search
MRVKPPGPVVTTSVVRGSPDYVREPKFYPPGHPVQRPPACPAEKALSCSVLSFPEGSCPA
LGREHQAGSLLHGDPADRCQSVHGGTKAAEDLLGCAGEPRILGGSAEEASARDRAPKTFP
NATLASGRCNVDSILALLRSKCGNGHINLHPVVQLIDIMKDLNRLSEDLKNSGVHLDCGS
LRGGGGAHEDSRLLPADRDLQYSFFSSPSLANSIRSPEERGVLLKSDPSRHPRPPARDGE
ADGGGGSAPQPPGHSVGVGDVSKAPADEAGCSQPDASDYSELAEADILNELASLACPGTQ
LLESQAMEPQPQLLPAQELDSQSRLLDSQSLESQPQLLDSQSLEPLPESLELQNLEPLGL
QSLEPLSESLELQSLEPLSESLELQSLEPLAEPLGLQTLEPLPGALEPPLLPTEPSLLEP
QPLGTVSELLEAQPGAGDPLRPHGLQPRLGGCPLSTMVKRGPCGGRGGGRCGEDHRKYAL
RRTDKPKMLCRRRRAGRGRRVDVTPESRVLSPLALPTEMPPGPEEPDTPVLSPPPPPSPT
TLDPNEMPKAPPAGKKSKCRGVRKMVVKMAKIPVSLGRRNKTTYKVSSLSSNLNLEGKEL
AASSSMEPTPLLKMKNNGRNVVVVFPPGEMPIILKRKRGRPPKNLLLGQAKPKEPTPEVK
KRRRRKQKLASPQPSYIADTNDSKADYSDVLAKLAFLNRQSQCSGRCSPPRCWTPSEPES
IHQAPDTQSISHFLHRVQGFRRRGGKAGGFGGRGGSHAARAARCSFSDFFEGIGKKKKAP
SALHADPVHPRKRGRLEPDPVGKPKRKRRARKNGALFPEPSSGQSFGDGPAAEWPGGEKG
SPWAPHHGHPGGQAGRNGGYQGAEARPFHAAGLESGSSGRAGFYAGSAPSSQTESGPERH
SLFTGYFRSLLDSDDSSDLLDFALSASRSESRKSAAAYTAPPAALPGQRGMAAYTARGGK
VPAASPAAEAAFHAAMQGRPAFPPGRASGGYGVTQSSSECRGTESFPKLAPPSAVSRSPT
AHPAASGTPGYSPYGSYGSAGQSVAPASVFPAGKQYPSAQDCPNSKDCSFAYGSGSSLPS
SPSSAHSAGYAPPTAGPSLPLGKAAFFNSAEQGGQFSSAAHTPLRCDSRASTVSPGGYMV
PKGSASFQPSPENCRQFPSAAPWAFRQGYGGLDWSSEAFSQLYNPGFECHLNEPNVILDI
SNYTPQKAKQQTVSETFSESSSDSTQFNQPAGYRRANSEASSSEGQSSLSSLEKLMMDWN
EASSAPGYNWNQSVLFQSNSKPGRGRRKKVDMFDTSHLSFSSSSSSSSVYPSKRNTGPRQ
PRGSRGACASKKERGTGKAKFPTKSQAVNPLFQESTDLGLDYYSGDSSMSPLPSQSRGFG
VGERDPCDYTGPYSMNPSTPSDGTFVQGFQSDSPGLGQPDLESKHFPALPHQLAAPGQQT
VFEAGLQKAFSPNCSPTLAFKEDLRAGSIRKLPACDSLKHSMQGGALPHAPHLACRDLPM
PQPHYDSPSCKNPPYWYSPNASTRSPSYDGKAGTGMLVDFMGRTDPPCLNPHLSSPSGTH
PSKGEKEPLEMSRAHHRGPYACPLINDLNISPVPRDSMLQLQDNYRYPSFAPQGHPVMAP
SQKSGFLGPMVEQQHPEDTFTVTSL
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgaagcccccgggcccagtggtaacgaccagcgttgtgcgtggctcgcccgac
tacgtccgagagcccaaattctacccgccgggacacccggtgcagcggcccccagcctgc
ccggccgagaaggcgttatcctgcagcgtgctcagcttccctgaggggtcgtgccccgcg
ctcggccgggagcaccaggcaggctcgctgctgcacggcgacccggccgaccgctgccag
agcgtccacgggggcaccaaagcggccgaggacctgctgggctgcgccggggagccccgg
atcctggggggcagcgcggaggaggcatccgcccgcgaccgggcgcccaaaaccttcccc
aacgcgacactggcctcgggccgctgcaacgtagacagcatcctcgccttgctccggagc
aagtgcggcaacgggcacatcaacctccaccccgtggtgcagctcatcgacatcatgaag
gacctcaaccgcctctccgaggacctcaagaacagcggggtgcacctggactgtggcagc
ctccgcggtggcggcggggctcacgaggacagccgcctcctgcccgctgaccgtgacctc
cagtacagcttcttctcctcgccctccttggccaacagcatccgcagccccgaggagcgg
ggggtgctcctcaaatccgacccgtcgcggcacccccggcccccggcgcgtgatggagaa
gctgatggaggcggggggagcgccccgcagcccccaggacacagtgtgggtgtgggggat
gtctccaaagctccggcggatgaagccggctgctcccagcccgatgccagcgattactcg
gagctggccgaggcggacatcctgaacgagctggcctccctggcttgcccggggacgcag
ctgctggagtcgcaggcgatggagccgcagccccagttgctgccagcccaagagctggac
tcccaatcccggctgttggattcccagtccctggagtcacagcctcagctgcttgattcg
cagagcctggagccgctgccagagtcgctggagctgcaaaacctggagccgctggggctg
cagtcgctggagccgctctccgagtcactggagctgcagtcgctggagcctctgtccgag
tcgctggagctgcagtcgctggagccactggcggagcccctggggctgcagaccctggag
ccgctgcccggagcgctggagccgccgctgctgcccaccgagccctcgctgctggagccg
cagcccctgggaaccgtctcggagctgctggaggcgcagccgggcgctggggaccctctg
cggccccacgggctgcagccccggctcggggggtgtcccctgagcaccatggtgaagcgg
ggcccctgcgggggccgggggggcgggcgctgcggcgaagatcaccgcaagtacgccctg
cgccggacagataagccaaagatgctgtgccgccggaggagggcgggccgagggcgccgg
gtggacgtcacccccgagagccgcgtcctgtcccccctcgccctgcccaccgagatgccc
cccgggcccgaggagcccgacaccccagtgctgagccccccgccgccaccgagccccacc
acgctggaccccaacgagatgcccaaagcccccccggcagggaagaagagcaagtgccgg
ggggtgaggaagatggtggtgaagatggccaagatccccgtgtccctggggaggaggaac
aagaccacctacaaggtgtcatcgctcagcagcaacttgaacctggaggggaaggagctg
gcagccagcagctccatggagcccacgccgctgctcaagatgaagaacaatgggcgcaac
gtggtcgtggtgttcccccccggcgagatgcccattatcctgaagcgaaagaggggccgg
cctcccaaaaacctgctgctgggccaagccaagcccaaggagcccaccccggaagtgaag
aagaggaggaggaggaagcagaagctggcctcgccccagccctcctacatcgccgacacc
aatgacagcaaagccgactactcggacgtgttggccaagttggccttcctgaaccggcag
agccagtgctcggggcgctgctcgccgccccgctgctggacccccagcgagcccgagtcc
atccaccaagcccccgacactcagagcatctcccactttctgcaccgcgtccagggcttc
cgccggcgcggcggcaaggcggggggcttcggtgggcgcggggggagccacgccgcccgc
gccgcacgctgctccttcagcgatttcttcgagggcatcgggaagaagaagaaagccccc
agcgccctccacgctgaccccgtgcacccccgcaagcgcggccggctggagcccgatcct
gtgggaaaacccaagcgcaagcgacgggcgcgcaagaacggggcgctgttccccgagccc
agctccgggcagagcttcggggacggccccgccgcggaatggcccgggggggagaagggc
agcccctgggccccccaccacggccaccccggcggccaggccggacgcaacggcggctac
caaggggccgaggcgagacctttccacgccgcggggctggagtcgggctcctccggccgc
gccggtttctacgccggcagcgcgccgtcctcgcagacggagagcgggccggagcggcac
agcctcttcaccggatacttccgctccttgctggactcggacgactcctccgacctgctg
gacttcgccctgtccgcgtcccgctccgagtcccgtaaatcggcggccgcctacacggcg
cccccggccgcgctgcccggccagcggggcatggctgcctacacggcccgcgggggcaaa
gtgcctgcggccagccctgcggccgaagccgccttccacgcggccatgcaaggccggccg
gccttcccgcccggccgcgcctccggcggctacggcgtgacacaaagctcgtcggagtgc
cggggcaccgagtccttccccaaactggccccgccatcggccgtgtcccggtcgcccacg
gctcacccggccgccagcggcacccccggctactccccgtacggcagctacggcagcgcc
gggcagagcgtggcgcccgccagtgtgttcccggcaggaaagcagtacccgtcagcacag
gactgccccaacagcaaggactgcagcttcgcctacggcagcggcagcagcctcccgtcc
tcgcccagcagcgcccacagtgccggctacgcgccaccaacagctggtcccagtttgccg
ctgggaaaagccgccttcttcaacagtgccgagcagggggggcagttctccagcgccgcg
cacacccccctgcgctgcgacagccgggccagcaccgtctcgcccggcggctacatggtg
cccaagggctcggcatccttccagccctcgcctgaaaactgccggcagttccccagcgct
gcgccgtgggccttccggcaaggctatggtggcttggattggagctcggaagccttcagc
cagctctacaacccgggcttcgagtgccacctcaacgaacccaatgtcatcctggacatc
tccaactacaccccgcagaaagccaagcagcagacggtctccgagaccttctccgagtcc
tcctctgacagcacccagttcaaccagccggctggttaccggcgcgccaacagcgaggcg
tcctccagcgagggccagtccagcctctccagcctggagaagctgatgatggactggaat
gaggcatcctctgcccctggctacaactggaaccagagcgtcctcttccagagtaactct
aagcccggtcgaggccgacggaagaaggtggatatgttcgacacctcccacctgagtttc
tcttcctcttcctcttcttcctctgtgtacccctccaagaggaacacaggaccccggcag
ccccggggttcccgcggggcttgtgcctccaagaaggagagggggacgggcaaagccaag
ttccccaccaagtcacaggcggtgaaccccctcttccaggagagcacggacctgggcttg
gactactacagcggggacagcagcatgtcccccctgccctcccagtcccggggcttcggg
gtgggggagcgggacccctgcgactacaccggcccctactccatgaacccctccaccccc
tcagacgggaccttcgtccaggggttccagagcgactcccctggtttggggcagccggat
ttggagagcaagcacttccctgccctcccacaccagctggcagcccccggccagcagact
gtgtttgaggccggtttgcagaaagccttctcgcccaactgctccccgaccttggccttc
aaggaggacctccgggcgggcagcatccgaaagctgcccgcctgcgactcgctcaaacac
agcatgcaggggggggccctgccgcacgccccgcacctggcgtgccgcgacctccccatg
cctcaaccgcactacgactcccccagttgcaaaaatcccccgtactggtattcccccaac
gccagcacgcgcagcccttcctacgacggcaaggcgggcaccgggatgctggtagacttc
atgggcaggacagaccccccgtgtctgaacccccacctgagcagcccgagcggcacccac
ccctccaagggcgagaaggagcccttggagatgtcccgggctcaccaccgaggaccctac
gcttgtcccttgatcaatgacttgaacatctcccccgtaccgagagactcaatgttgcag
ctgcaggacaactacaggtaccccagttttgcaccccaagggcaccccgtcatggccccc
agccagaagagcgggtttttgggacccatggtagagcaacaacaccccgaggacactttt
acggtcacctcattgtag
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