Parus major (Great Tit): 107214259
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Entry
107214259 CDS
T04864
Symbol
ZC3H12A
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107214259 (ZC3H12A)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
107214259 (ZC3H12A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
107214259
NCBI-ProteinID:
XP_015504963
Ensembl:
ENSPMJG00000006834
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All DBs
Position
23:3792826..3801872
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AA seq
625 aa
AA seq
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MSAGSVAPGWPEALPAAARPAAGMSGSESPEGPGDGPELQLKVDFFRKLGYSSEEIRVVL
QKLGLGADTNTVLGELVKHGPAERDGPEAPPEPGEAPLVPRGGAGNKSPAPGPEETESDN
LKPIVIDGSNVAMSHGNKEVFSCRGILLAVQWFWDRGHKDITVFVPSWRKEQPRPDVLIT
DQYILRDLEKKKILVFTPSRRVGGKRVVCYDDRFIVKLAHESDGIVVSNDTYRDLQNERP
EWKKFIEERLLMYSFVNDKFMPPDDPLGRHGPSLDNFLRKKPVLPEHKKQQCPYGKKCTY
GIKCKFYHPERTNQPQRSLADELRANARLSPTKSPSAKEEKKGKRGSQAELLCSVPTESD
KSSLQKVSADRKSLAHKAKPSDVVLQAKGCVSGSVSADRYQQPPMDSLSYISQEHLDSGI
GSLENQLSDMWPHRCTSHCDHSHTEQVAVCTCGRQRPVYPHSPSLEQKGLVSYKRSSHKS
SSSGPSFLHYSPEMPPSGAPHSFSGYGVPVHAGAAGQYSLPGEFGAVLPHSREFWSEPYA
LPQVRSPGVRDPCAVQRAPGPAYGDSGPWAAEEQFSEERASVHVKLCGIFHPHLVDAVMS
RFPRLLDPQRLAAEILTYKAQNPGM
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgggcagcgtcgccccgggctggcctgaggcgctgccggccgcagcccggccc
gcagcggggatgagcggcagcgagagccccgaggggcccggggacggccccgagctgcag
ctgaaggtggattttttccgcaaactcggctactcctcggaggagatccgcgttgtactg
cagaagctgggcctgggtgccgacaccaacacggtgctgggggagctggtgaagcacggc
ccggccgagcgggacggccccgaggccccgcccgagcccggagaggccccgctggtccct
cggggcggtgccggcaacaagtcccccgcgcccggccccgaagagacggagagcgacaac
ctgaagcccatcgttatcgatggtagcaacgtggccatgagccatgggaacaaagaagtg
ttctcctgccgagggatccttctggctgtccagtggttctgggacagggggcacaaggat
attacagtctttgtgccatcgtggaggaaggagcagccaagaccagatgtactcataaca
gaccaatacatcctgcgtgacctggagaagaagaagatcctggtgttcacgccgtcacgg
cgggtcggcggcaagcgcgtggtgtgctatgatgaccggttcatcgtgaagctggcccat
gagtccgacggcatcgtcgtgtccaacgacacctaccgggacctgcagaacgagcggccc
gagtggaagaagttcatcgaggagcgtctgctgatgtattcctttgttaatgacaagttt
atgcctccagatgatcccttaggacgtcatggcccgagcctggataacttcctcaggaag
aagcctgtacttccagaacacaagaaacagcagtgcccttatgggaaaaaatgcacttac
ggaattaagtgtaagttctaccatcctgaaaggaccaatcagccccagcgctcgttagct
gatgaactccgtgccaacgcaaggctgtctccaaccaaaagtcccagtgccaaggaggag
aaaaaggggaaacggggttcccaggcagagctcttgtgctctgtgcccacggagagcgac
aaaagctctttacagaaggtctctgcagacaggaagagcttggcccacaaagccaagccc
agtgacgttgtgcttcaggccaaaggttgtgtgtcaggcagtgtctccgctgacaggtac
cagcagcctcccatggactctctgtcttacatctctcaggagcatcttgactcgggcatt
gggtctctggagaaccagctgtctgacatgtggcctcacagatgtaccagtcactgtgac
cattcccacacagagcaggtggctgtctgcacctgtggtaggcagcgacccgtctaccca
cattcccccagcttagagcagaaaggtctggtctcttacaagcgcagctcccataaatct
tcttcctctggtcctagtttcttgcactacagccctgagatgcctccctcaggagcaccc
cactctttctcaggctatggagtgcctgtgcatgcgggtgccgcggggcagtacagcctg
cctggtgagttcggtgccgtgctgccccactcgcgggagttctggtctgagccgtacgcg
ctgccgcaggtgagatcccctggcgtgcgtgacccctgcgcggtgcagagggccccgggg
ccagcctacggggactcagggccctgggctgccgaggagcagttctctgaggagcgggcc
agtgtgcacgtcaagctgtgcggcatcttccacccacacctggtggatgccgtgatgagc
cgcttcccccggctgctggacccccagaggctggcagcagagatcctcacttacaaggcc
cagaacccaggtatgtga
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