Parus major (Great Tit): 107214331
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Entry
107214331 CDS
T04864
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog isoform X1
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04140
Autophagy - animal
pmaj04148
Efferocytosis
pmaj05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107214331 (VPS11)
04148 Efferocytosis
107214331 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
107214331 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107214331 (VPS11)
Membrane trafficking [BR:
pmaj04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
107214331 (VPS11)
Hops complex
107214331 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
TPR_GEMI5
zf-C3H2C3
zf-RING_5
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
107214331
NCBI-ProteinID:
XP_015505094
Ensembl:
ENSPMJG00000007445
LinkDB
All DBs
Position
24:complement(39144..49322)
Genome browser
AA seq
929 aa
AA seq
DB search
MAAYLQWRRFVFFDRETVREPPGPDGASAKPFALPPGIAVCDSGRGSLVFGDMEGQIWFL
PRSLQLSSFQAYKLRVTHLYQLKQHSILVSIGEDEEGINPLVKVWNLEKRDGGNPLCTRI
FPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPVTG
LAFRQSGKATHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSLSDPSQDLQFIVAG
NECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAGNEAQNSDKQVL
NIYDLCNKFIAYSSIFDDVVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFE
MAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQ
RIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETAIKV
LRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALHYIGRLPFEQAESNMKRYGKIL
MHHVPNETTELLKILCTDYRPSGGNEGPGMLEGKKANSEEFIPVFANNSRELKAFLEHMT
EVQTDSPQGVYDTLLELRLQNWAHEQDEQIKEKLHNEALTLLKSGRFKTVFDKALVLCQM
HSFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALGYFARKEE
NCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSRQIEQDELR
IQKYREETTRIRLEIEDLKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSE
SDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTL
ITDLPSGKTATTIEAGLQRELLIHTKRST
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctacctgcagtggcgccggtttgtcttctttgacagggagacggtgagggag
ccgccggggccggatggggccagtgcgaagcccttcgcgctgcccccgggcatcgcagtc
tgcgactcgggccggggaagcctcgtgttcggagatatggaaggtcagatttggtttttg
cctcgctcccttcaactcagcagtttccaagcttacaagctaagggtgacgcatctgtac
cagctgaagcagcacagtatcctggtttctattggtgaggatgaagagggtattaatcct
ttggtgaaagtctggaacctggagaaacgagatggcggtaatcctctttgcacacgaatt
tttccagcgataccgggtaacaagcccaccgttgtatcctgcctaactgtccatgagaat
cttaatttcatggctatcggttttgcagatgggagtgttgtgcttactaaaggagacatc
actcgagatcggcatagtaagacccagatcctacatgaaggcagttatccagttactggc
cttgcttttcgacagtctggcaaagcaacacatctatttgtggtgaccacagagaacatc
cagtcttatatgctttcagtgaaagactatcctcacctggagctggacactcacggttgt
ggattacgctgctcatctctcagtgacccctcacaggatctccagttcattgtggcagga
aatgaatgtgtgtacctttatcaaccagatgaacgtggcccctgctttgccttcgaggga
caaaagctgattgttcactggtatcgcgggtacctcatcattgtctccaaggaccgaaag
acttccccaaagtcagaatttgctgggaatgaggcacagaattcagacaaacaagtcctg
aatatctatgacttgtgcaacaaattcattgcatacagctccatctttgatgatgtagtg
gatgtcttggcagagtggggttctctctatgtactgaccagagatgggaaaatccatgta
ctacaggagaaggatacacaaaccaaactcgagatgctgttcagaaagaacttatttgaa
atggccattaacctggccaagagccaccacttggacagcgatggtttgtcagagattttc
cggcagtatggagatcatctctataacaaaggaaaccatgatggagccattcagcagtat
atccgaactatagggaagctagaaccatcttatgttattcggaaattcctggatgctcag
cgtatccacaacctcactgcttatctacagatgctccatctgcagtccctggctaatgca
gaccacactacgcttctgctgaattgctataccaaactcaaagacagctccaaactggaa
gagttcattaagacaagtgagagtgaggtccactttgatgtagaaacagctatcaaggtg
cttcgccaagctggttactactcccatgcagtgtacctggcagagaagcatgaacatcat
gaatggtacctcaaaatccaattagaggacatcaagaactaccaagaggctttgcactac
attgggagactgccctttgaacaggcagagagtaacatgaagcgatatggtaaaatcctg
atgcaccatgtccctaatgagaccactgaattgctgaagatcctttgtactgattaccgt
ccctcaggaggcaatgaaggccctgggatgctggaaggaaaaaaggctaattcagaggag
ttcatcccagtctttgcaaacaactcccgagaactgaaagcttttctggagcacatgact
gaggtgcagactgactctccacagggtgtctatgacaccttactggaacttcgattgcag
aactgggcacatgaacaagatgagcagataaaggagaagttgcacaatgaagccctcacc
ctcctgaagagtggaaggttcaaaacagtctttgataaagccttggtcttatgtcagatg
cacagtttcaaggatggtgttctctacctctatgagcagggcaaacttttccaacagatc
atgcactaccacatgcagaatgagcagtacaagaaggtgatcgaggtgtgcgagttgtat
ggtgaccaagaggcttgtctctgggagcaggctctcggctactttgcacggaaggaggag
aactgcaaagagtatattgctgcagtgctgaaacacattgagaacaagaatcttatgcct
ccactgcttgttgtgcagacgctggctcataactccacagccaccctctctgtgattaag
gattatcttgtcaacaaactgcagaagcaaagtcgccagatagagcaagatgagctgaga
attcagaaataccgagaagaaactacgaggatccgtctggaaatcgaagacctaaaagca
agtcccaagattttccagaagaccaagtgtagcatttgcaccagtgcattggagctccct
tcagtccacttcttgtgtggtcattcctttcaccagcactgctttgaaagctactctgag
agtgattcggaatgtcctacttgcatgccagaaaatcgcaaagtaatggacatgatccga
gcccaggagcagaagagagatctgcatgatcagtttcagcatcagctcaagtgttcaaac
gatggcttctcagtcgttgctgactactttggtcgtggtgtcttcaataagctcaccctg
atcacggacttaccctcaggaaagacggctacgacgatcgaggctggcctgcagcgggag
ctgcttatccacaccaagcgcagtacctga
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integrated database retrieval system
