Parus major (Great Tit): 107214410
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Entry
107214410 CDS
T04864
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04270
Vascular smooth muscle contraction
pmaj04625
C-type lectin receptor signaling pathway
pmaj04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107214410 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
107214410 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
107214410 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107214410 (ARHGEF12)
Membrane trafficking [BR:
pmaj04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107214410 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
Motif
Other DBs
NCBI-GeneID:
107214410
NCBI-ProteinID:
XP_015505281
Ensembl:
ENSPMJG00000008632
LinkDB
All DBs
Position
24:2283969..2353991
Genome browser
AA seq
1533 aa
AA seq
DB search
MSGTQSTITDRFPLKKPSRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSDVDLAAFGHMSPIMASPHSP
GTSGNAERITSPVLMGEENNIVHSQKVEILRKMLQKEQERLQFLQEEYSRAPSTRLLKEI
QETKKHIPQLQEQLSKATGCTQDGVLSSRAVSEALQISEGEAESGDSGSKLDFSGDSPSR
PNSDIADSPRSGLKERIYPDESPEKAELQDTDSQSSVGSPLSRVGTQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVF
LEFYQFFLDRAANLKVPVPDEISLELDRRRPELLPEELHRQFIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELTRLDAERLRDRNAVEKERSCAEQIIAKIEEVLMTSQPLEEDKSS
TMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEKEGEEKGKRRGFPNILG
PPRRPSRHDSSAIGRAMEMQKPRHPKHSPTASSVSPEPPESSKLRQSGSSSEGTDAPYPP
ANPMSPLAMGPFASPEGSKDGDTGLKQPGEAPPASDSMDGTPRTPNNTFEFPSPLENLQE
EEGESERMVDMGTPKPFRKMDSVGFADVQSEDELYDFDMDMDPPNWQQLVSREVLMGLKP
YEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILSSSDKRKIFSNLEDILGLHV
ALNDQMKSVRKRNETSVIGQIGEDLLSWFSGAAEEKLKLATATFCSNQPFALEVIKSRQK
KDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKKA
ADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHE
GPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLN
TVLVRQVATDNKAFFVISMSATGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGSSRRVI
PLPQSGPGEDEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPLILNPQSSSPLMSDKAK
VEGLLGAEGQFEKVQQAELALKDSSACYEHPASSSAPEGQWARDALRNLGLLRQLLVQQL
GLAEKGSLEDRQRLPRFRTVSQEGQTESGSELQPCDSKFQQPGEDGSAGRTGEPAAGHGP
RTAAEGPAPGDGLQLAEPAARGALPMDSTNLEGSSSELEGLGAEESGEHFFDAREAHSDE
NPAESELLDRKEDEEVQIRISGNYLILDGYGTVQESSTDEEVSALVLQCTSHSQPPLDCP
QQQPLSPRDTQSDGGSSPFPEELLGSRWAGLEEPCPFLGSPQLPLEIRVQLMQYIQNIED
ALEKLKEVEEDYSVLRRQGLAGSASTGEHSDKS
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaaccttcgagacac
ggcagcattctgagcagagagtccccagcagacaagaagcagaaggttgagcgctgcagc
agcacccacgacttcgatcccacagatagctcctccaagaagacaaagtctagttctgag
gagagtagatccgagacgtatggcctggtgcagaggtgtgtggtgatccagcgggatgag
aacggctttgggctgacggtcagcggggacaaccccgtcttcgtgcagtccgtcaaggaa
gatggagcagccatgcgggctggagtgcagacaggtgatagaattatcaaggtgaacggg
actctggtgacacactcgaaccatttggaggtggtcaagctgatcaagtcgggttcctat
gtagctctcactgtccaggggcgccctccagggtcaccccagattcccttggcggattcc
gacgtggatctggcagcttttgggcatatgtctcccatcatggcatccccccactcgcct
ggcacgtcagggaatgcagagaggatcaccagcccagtgctcatgggggaggagaataac
attgtccacagccagaaggtggagatcctgaggaagatgctccagaaggagcaggagagg
ctgcagttcctgcaggaggagtacagcagagccccctccacccgcctgctcaaggagatc
caggagacaaagaaacacattcctcagctgcaggagcagctgtccaaggccacaggctgc
actcaggatggagtcctgtcctcccgggcggtgtccgaggcgctgcagatcagcgagggg
gaggcagagagtggggacagtggcagcaaactggatttcagtggtgacagcccctccaga
cccaacagtgacattgctgatagtcctcgcagcggcctgaaggagaggatttatccagat
gagagcccagaaaaggctgagcttcaagatactgattcccagtccagcgttggaagtccc
ctgtcccgagtggggactcagatcattggagcagaggatgatgattttgacacggagcag
gagcagattaatgggcagtgcagctgcttccagaacatcgagctcctgaaatcccgcccg
gctcacctggctgtgctcctgcaccatgtggtgtcccagtttgatcctgcagccctgctg
tgctacctttacacagacctgtacaaacagaccaactccaaagagacacggcgcgttttc
ctggagttttaccagtttttcctggacagagctgcaaacctgaaagtcccagttccagat
gaaatctccttggaattagacaggagaaggccagagctcctccctgaagagctccaccgc
cagttcatccaaaccatgcaggataaagtctgtccagaggttcagaggaacctggaagat
ttcaggcagaagcggagcatggggctgaccctggccgagggggagctgaccaggctggac
gcagagcggctgcgcgaccgcaacgccgtggagaaggagaggagctgtgccgagcagatc
atcgctaaaatcgaggaggtcctgatgacatctcagcctctggaagaagacaagagctcc
accatgcaatatgtgatcctcacctacatgaaacacctgggagtcaaagtcaaagagcct
cggaacctggagcagaagcggggccggattggtttcctgccaaagatcaagcaaagcatc
aagaaggagaaagaaggagaggagaaagggaagaggagaggcttccccaacattctgggc
cccccgaggagaccgagccgacatgacagcagtgcaattggcagggccatggagatgcag
aagcccaggcaccccaagcactctcccacagcctcttctgtgagcccagagccccccgag
tccagcaagctgcggcagagcggctcctccagcgagggcacagatgccccttacccccct
gccaaccccatgtcccccctggcaatggggccctttgcctccccagagggcagcaaggac
ggtgacacaggtttgaagcagcctggggaagccccacctgccagtgactccatggatggc
accccccgcacacccaacaacacctttgagttcccatctcctttggaaaacctgcaggag
gaggagggagaatctgagaggatggttgacatgggaacaccaaaaccttttcgcaagatg
gacagtgttggctttgcagatgtgcagagtgaggatgagctctatgacttcgacatggac
atggatcctcccaactggcagcagcttgtgagcagggaggtgctgatggggctcaaaccc
tacgaaatcaagcgtcaagaagtgataaatgagctgttctacacggagcgagcccacgtg
cgcacgctgaaggtcctgcacaacgtcttctaccagagggtcaccagggagggcatcctc
agctccagtgacaagcggaaaatcttctccaacctcgaggatatccttgggctgcatgtt
gcactgaatgatcagatgaaatctgtccgaaaaaggaacgagacttctgtcattggccaa
attggggaagatttgctctcctggtttagtggagcagcagaggagaagctgaaacttgcc
actgccaccttctgcagcaaccagcccttcgctctcgaggtcatcaagtcccgccagaag
aaggactcgcgcttccagacctttgtgcaggatgctgagagcaaccccctgtgccggcgg
ctgcagctgaaggatatcatccccacggagatgcagaggttgactaaatacccccttctg
ctggataacattgctaaatacacagagctgcctgaggagaaggagaaggtcaagaaagcg
gcagatcactgtcgccagatcctcaaccacgtgaaccaggctgtcaaagagtcagagaac
aagcagcatctggaggattatcagcggcgactcgacctctcctacttgaagcagtcggag
gatcccatgatggatgagttcaggaacctggatctaacaaagaggaaaatgctccatgaa
gggcccctgacctggaaagtgaatcgtgacaaaaccatcgatctgtacactctgctgctg
gaggacatcctggtgctgctgcagaaacaagatgacaaactggtgctgaagtgccacagc
aagatcctggcatccacagccgacagcaaacacaccttcagccccatcatcaaactcaac
actgtgctggttcgccaggtggccacagataacaaagctttctttgtcatctccatgtcg
gcgacgggggctcacatctacgagctggtggcacagactgtctccgagaagaatgtctgg
caggaccttatagctcagatggcaggaactgtgaagatggggagcagcagaagagtgatc
ccactgcctcagtcaggccctggagaagatgagcgtgaagaagaggagcagcagaagctc
aaagagcagcatgacattcctgccagcagcctgcaaagtccagataaagatttgggcctg
gaatctccattaatactgaaccctcagtcctcttcacccctcatgtctgacaaggccaag
gtggaagggctgctgggggctgagggacagtttgagaaggtgcagcaggcagagctggca
ctgaaggactcctctgcctgctatgaacacccggccagcagctcagccccagaggggcag
tgggcacgggatgccctgaggaacttggggctgctgaggcagctcttggtgcagcagctc
ggcctggctgagaaggggagcctggaggacagacagcgcttgcccaggttcaggaccgtg
tcccaggaaggccagacagagagtgggagcgagctgcagccctgtgacagcaaattccag
cagcctggagaggacggaagcgctggcagaactggagagcccgcggctgggcacggcccc
cggactgcagcggagggcccggccccgggggacggcctgcagctggcagagcccgcggcc
aggggcgctttgcccatggacagcacgaacctggagggctccagctcggagctggagggg
ctgggggctgaggagagcggggagcatttcttcgatgcccgggaagctcacagcgacgag
aacccggccgagagcgagctgctggacaggaaggaggacgaggaggtgcaaattcggatc
tcaggaaattatctgatcctagacggatacggaacagtgcaggagagctccacggacgag
gaggtgtcagccctggtcctgcagtgcacctcccacagccagccccccctggactgtccc
cagcagcagcccctgtccccaagggacacccagtcagacgggggcagctccccgttcccc
gaggagctgctgggctcgcgctgggcagggctggaggagccctgccccttcctgggcagc
cctcagctcccgctggagatccgagtgcagctcatgcagtacatccagaacatcgaggat
gccctggagaagctaaaggaggttgaggaggattacagcgttctgcggcgccaggggctg
gctggctcagcctccacaggagagcactcagacaaaagctag
DBGET
integrated database retrieval system
