Parus major (Great Tit): 107214606
Help
Entry
107214606 CDS
T04864
Symbol
ITGA10
Name
(RefSeq) integrin alpha-10 isoform X1
KO
K06586
integrin alpha 10
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04510
Focal adhesion
pmaj04512
ECM-receptor interaction
pmaj04810
Regulation of actin cytoskeleton
pmaj04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107214606 (ITGA10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107214606 (ITGA10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107214606 (ITGA10)
04810 Regulation of actin cytoskeleton
107214606 (ITGA10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pmaj04515
]
107214606 (ITGA10)
Cell adhesion molecules [BR:
pmaj04515
]
Integrins
Integrin alpha subunits
107214606 (ITGA10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
VWA_2
Integrin_A_Ig_3
Motif
Other DBs
NCBI-GeneID:
107214606
NCBI-ProteinID:
XP_015505670
Ensembl:
ENSPMJG00000001570
LinkDB
All DBs
Position
25LG2:complement(417292..427151)
Genome browser
AA seq
1177 aa
AA seq
DB search
MWAVGTRGVLLALFLLPGLCEGFNIDVGHSRIFQGPPESQFGYRVLQWGGNGDRWLLVGA
PWDGNGQGDIYKCGVRLQNSSCAKANLGTGAAAPWLRSSAGHLGMTLVDSKDGGFVACAP
LWSQECGTSVFSSGRCVHLNEELQLTGTIAPTAQREWGGMYWDILGCATLVSPCPLPGCS
TYMDIILVLDGSNSIYPWEEVQAFLGNILGRFFIGPGQTQVGVLQYGERLVQEWALGQHP
TAQSLLEAARNLTRQEGRETRTAMAIRQACTESFSPAQGGRPGATRLLLVVTDGESHDGD
ELPAALEECDRHNVTRYAIAVLGHYLRRQQDPEDFIREIKFIASDPDEKYFFNVTDEAAL
NDIVDALGDRIFSLEGTHGDNESAFELEMSQIGFSIHHFEDGILFGMVGAYDWEGGVLEE
SQRGRIVPPWEAFQEEFPLELKNHAAYLGYSVSSLQLPGGQRLLVAGAPRFQHKGKVLLF
QLDPMGTVTVAQALMGEQIGSYFGSEVLVLDLEGDGDSDLLLVGAPTYLGGQSRETGRVY
VYRVGQDRLSPAGSLHPEPRQQDSRFGSALGVVPNLSQDGLAGAVVGAPLEDEHRGALYV
FHVSPATLLPQYKQRIEAAALGWSLRYFGISVDGRVDMDGDGLVDVAVGAHGAAVVLRSR
WIIQVFAWMSVEPAAVSVTQRNCQRSGSSAVCLRARTCFLAETRTRNPVDMDIDLRYNVS
LEDQILGSRAAFDSGARRLLQRRIEFPLGRKSCIRIPFHVLDTSDYMRPLTLSLTWALDV
AATPVLDEASPTTIRKLIPFFKDCGDDDKCVTDLVLKATTDIVGSRQSPHILRKGRRRML
VEVELENREENAYNVSLWLHLPGNLHFSSLVLQDPSTVKLECSALGRHHRRCSVGYPVFH
SQAKVSLTLELEFSCSVLLDRAEVTLQASSDSTEVTPQDNVVKLSVPIRYEPNLFLSSNT
NLHRYEVHPLGTFSHSSGPEFTTTVKMQNLGCYPIQNVTLHMALPALGHHQATILSVTHV
LTENATCTLQLPDERTQVVPVPPEDLLHMDRLDCSNTWCQELSCHLERLERGGGVSIQLL
RTLHDSFFSGVKFRSVKIVSSVWLGVTGGMLVLEEGVQRRELVLEVLEGRRVPVSLWILG
GSALGGLLLLALLSLGLWRLGFFSHRKPSREEEDEEH
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtgggctgtggggacccggggggtgctcctggcgctgtttctgctcccagggctctgt
gaggggttcaacatcgacgtggggcattcgcggatcttccagggaccccccgagtcccag
tttgggtaccgggtgctgcagtggggtggcaatggggacaggtggctgctggtgggggcc
ccgtgggatgggaatggtcaaggtgacatctacaagtgcggcgtgagactccaaaactcc
tcctgtgccaaggccaacctcggtacaggggctgcagctccgtggctccgcagcagcgcc
ggacaccttgggatgacactagtggactccaaggatggtgggtttgtggcatgcgccccg
ctttggtcccaggaatgtggcacctctgtgttcagctctggccgctgtgtccatctcaat
gaggagctccagctcacggggaccattgcacccacagcacagcgtgagtggggtgggatg
tactgggatatactgggatgtgccaccctggtgtcaccgtgtcccctgccaggctgttct
acctacatggacatcatcctggttctggacggctccaacagcatctacccctgggaggag
gtgcaggcattcctcgggaacatcttgggacgcttcttcattggtcctgggcagacccag
gtgggggtgctgcagtacggggagcggctggtgcaggaatgggcgctggggcagcaccct
acggcgcagagcctgcttgaggccgcccggaacctgacgcgtcaggaggggagggagacg
cgaacggccatggccatccggcaggcatgcacagagtccttcagcccggcgcaaggtggg
cgcccaggggccacacggctgctgctggtggtgacagacggggagtcccacgacggggac
gagctgccagcagcgctggaggagtgcgaccggcacaatgtcacccgctatgccattgcc
gtcctgggacactacctgcgtcggcagcaggatcccgaggatttcatccgggaaatcaag
ttcattgccagtgatcctgatgagaagtatttcttcaatgtcacagatgaggctgccctc
aatgatatcgtggatgctctgggagatcggatcttcagcctggaaggcacccatggggac
aacgagagtgccttcgagctggagatgtcccagatcggcttttctatccaccactttgag
gatgggatcctctttggaatggttggagcctatgactgggaggggggtgtgctggaggag
agccagcgtgggcgcattgttccaccctgggaagcgtttcaggaggaattcccgctggag
ctgaagaatcacgcagcgtatctggggtactctgtgtcctcgctgcagctcccggggggg
cagcgcttgttagtggctggtgccccccgattccagcacaagggcaaagttctcctcttc
cagctcgaccccatggggaccgtgacggtggcccaggcattaatgggggagcagatcggc
tcctacttcggcagtgaggtcttggtcctggacctggagggagatggggacagtgacctg
ctgctggtgggcgcgcccacctacctggggggccagagcagggagactgggagggtctat
gtgtaccgtgtggggcaggaccgcctgagccccgcagggtcgctgcaccctgagccgagg
cagcaggattccagattcggttccgccctgggcgtggtgccgaacctgagccaggacggg
ctggccggagccgtggtgggagcgccgctggaggacgagcaccgcggtgctctctacgtg
ttccacgtctccccggccaccctcctgccccagtacaagcagcgcatcgaggcggcggcg
ctggggtggagcctccggtatttcgggatcagcgtggatggacgggtggacatggacggg
gacgggctggtggacgtggccgtgggggcacatggtgcggctgtagtgctccggtcccgc
tggattatccaggtgttcgcatggatgtctgtggagccagcagctgtcagtgtcacacaa
cggaactgccagcgcagtggctccagcgccgtctgcctccgggcccggacctgcttcctt
gccgagacacgcacacggaaccctgtggacatggatattgatctccggtacaatgtatcc
ctggaggaccagatcctgggatcccgtgctgcctttgactcaggtgcccgccgactgctc
cagcgccgaattgagttcccattgggaaggaagagctgcatccgcatccccttccatgtc
ctggacacctcagattacatgaggccactcaccctcagcctcacctgggccctggatgta
gctgcaacgccggtgctggatgaggcgtcccccaccaccatccgcaaactgatcccattt
ttcaaggattgtggggacgacgacaagtgtgtcaccgacctggtgctcaaggccaccaca
gacattgtgggctccaggcagagcccccacatcctgcggaagggccggaggcggatgctg
gtggaggtggagctggagaaccgtgaggagaatgcctacaatgtcagcctgtggttgcac
ctgcctggaaacctccacttctccagcctcgtgctccaggatcccagcacggtgaagttg
gagtgctcagcactggggaggcaccaccggcgctgcagtgtcgggtaccctgtcttccac
tcgcaggccaaggtatccctcaccctggagctggagttcagctgctccgtccttctggac
cgtgctgaagtcactctccaggccagcagtgacagcactgaggtgacaccacaggacaac
gtggtcaagctttctgtccccatccgctatgagcccaacctgttcctgtccagtaatacc
aacctgcatcgctatgaagttcatccccttggcaccttcagccacagctctggccctgag
tttaccaccacagtcaagatgcagaatttggggtgctaccccatccagaatgtcaccttg
cacatggccctgccagcactgggccaccatcaggccaccatcttgtctgtcacccatgtc
ctcactgaaaatgccacctgcacgctgcaactccctgatgagaggacacaggtggtcccg
gtgccccctgaggatctgctgcacatggacaggctggactgttccaacacctggtgccag
gagctgagctgccacttggagaggctggagcgtggtgggggtgtctccatccagctcctg
cggaccctccacgacagcttcttcagtggagtgaaattccggagtgtgaagatagtcagc
agtgtctggctgggggtcacagggggcatgttggtgctggaggagggggtgcagcgcagg
gagctggtgctggaagtgctcgagggaaggcgggtgcccgtgtctctctggatcctggga
ggcagtgccctggggggactcctgctcctggcactactcagccttggcctctggaggctg
ggattcttctcccatcggaagccctcccgagaggaggaggatgaggagcactga
DBGET
integrated database retrieval system