Parus major (Great Tit): 107214692
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Entry
107214692 CDS
T04864
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A isoform X1
KO
K12876
RNA-binding protein 8A
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03013
Nucleocytoplasmic transport
pmaj03015
mRNA surveillance pathway
pmaj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107214692 (RBM8A)
09122 Translation
03013 Nucleocytoplasmic transport
107214692 (RBM8A)
03015 mRNA surveillance pathway
107214692 (RBM8A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107214692 (RBM8A)
03041 Spliceosome [BR:
pmaj03041
]
107214692 (RBM8A)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107214692 (RBM8A)
Spliceosome [BR:
pmaj03041
]
Complex C
Other components
EJC/TREX
107214692 (RBM8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
107214692
NCBI-ProteinID:
XP_015505798
Ensembl:
ENSPMJG00000001631
LinkDB
All DBs
Position
25LG2:437772..440500
Genome browser
AA seq
174 aa
AA seq
DB search
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARVREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDVHDRFAEFGEIKNIHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQELMGQPVSVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgctggatcttcatgaggcgggcggagaggattttgctatggacgaggat
ggcgacgagagcatccacaagctgaaggaaaaggcaaagaagcggaagggccgcggcttc
ggctcagaggaaggatcccgcgctcgggtgcgtgaagattacgacagcgtcgagcaggat
ggcgatgagccagggccacagagatccgtggagggctggatcctgtttgtgacaggggtg
catgaggaggccacagaggaggacgtgcatgaccgattcgccgaatttggggagatcaag
aacatccacctgaacctggaccggcgcacaggatacttaaagggctacacgctggtggag
tatgagacgtacaaggaggcacaggcagccatggaggggctcaatgggcaggagctcatg
gggcagccggtcagcgttgactggtgcttcgtccgaggcccccccaagggcaagaggagg
ggtggacgccggcggagccgcagtccagaccggcgccgccgatga
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