Parus major (Great Tit): 107214741
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Entry
107214741 CDS
T04864
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pmaj04040
]
107214741 (TRPA1)
Ion channels [BR:
pmaj04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107214741 (TRPA1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107214741
NCBI-ProteinID:
XP_015505881
Ensembl:
ENSPMJG00000005162
LinkDB
All DBs
Position
2:complement(119081046..119112198)
Genome browser
AA seq
1125 aa
AA seq
DB search
MKRSLLRLCRAREKAAAASAYQGVVCEADAASVASQDVFKVISDGSACRLRSFIKKNRSG
LTKVDELNATPLHHAAEGGQIELMQLIIDDSSCEVLNVMDSSGNTPLHWATKKNQVESVR
LLLSRGANPNILNSNMMAPLHMAVQSLHNEIVKILVQHSSTDVNLEGEAGNTPIMVACYK
DNPEALTLLIENGGKICKPNKTGCMPIHAAAFSGAKTCLEILLKKGEELGHSAKTHINFT
NNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSY
AGEESIIDAVDGNKETLLHRTALFDHYELAEYLISMGANIDSVDIEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKYLQMEHIKNLVVDEDNEGCT
PLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILD
TNVKCTDRVDEEGNTALHLAAREGHAKAVRLLLDYGAKILFNKAVASFFHEAIHNRRKDV
VSAVILHKRWEEAVVTFSHYSSANKCPLLEMVEYLPDSFKLVLDNCIIESSEEKTSRDFY
IEYNFRYLQCPLTLNRKVKDGEEIFYEPLTTLNAMVRHNRMELLSHPVCKEYLLMKWMAY
GFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLNGTELYEARPLEYEDSYFTRVCMCLVLI
MSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYTTSIIFVSSLFINTPAHLQWECGAIAV
YLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYS
TPLLSVMKTFAMMLGDINYHDAFLDPLLSSELPYPFLSYTVLIIFTLLIPILLMNLLIGL
AVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVF
QYCFGCEDSTTYAQSPDTTLELEVLKQKYRLKDISTLLEKQHDLIKLIIQKMEIVSEAED
EDSNDLFQHKFRKRQLEHKNSKWDTVLKAVKTNVPNPSTEKNSFF
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctctgctgcggctctgccgggcgcgggagaaggcggccgcggccagcgcc
taccagggcgtcgtgtgcgaggcggatgccgcctccgtcgcctcgcaggatgtcttcaag
gttatttcagatggaagtgcctgcaggctacggagcttcattaagaagaatcgttctggg
cttaccaaagtggatgaattaaatgccaccccgctgcatcacgctgcagaaggaggacaa
atagaactaatgcagttgatcattgatgattcttcctgtgaagtattaaatgtgatggat
tcttctggaaataccccactgcactgggccacaaagaaaaaccaggttgaaagcgttcgt
ttgcttctcagcagaggagccaatccaaacattctcaactccaatatgatggcacctttg
catatggctgttcagtccctgcacaatgaaattgtgaagattttagtccaacatagcagt
acagatgttaacttggaaggtgaagcagggaacacacctatcatggtagcatgttacaag
gacaatcctgaagcactgacgctcctgattgaaaatggaggaaaaatatgtaaaccaaac
aaaacaggatgtatgcctatccatgcagcagcattttcaggtgcaaaaacatgtctggaa
attcttttgaaaaaaggtgaagaactgggtcactctgctaaaacccacatcaattttacc
aataatgggaagtgcagtccacttcacttggcagttcagagtggtgacctcgaaatgatt
aaaatgtgcattgaatttggagcccagattgatctaaaacagaatgaaaaatgcacagca
cttcattttgctgccactcaaggagcaacagagattgtaaagctaatgatgtcatcctat
gctggtgaggaatccattattgatgctgtagatgggaataaggaaacattgcttcacaga
acagcattgtttgatcattatgaactggcggagtatttgatttcaatgggggctaatatt
gatagtgttgacatagaaggtcgatccccacttctgctggccacttcctgtgcatcatgg
aaaattgtgaatttactgctttccaaaggagcaaatgtatcattaaaagatcatcttggt
cggaatttcttgcatttgaccgtattgcagcctggaggattacagcatctgaatgaaaaa
tatctgcagatggaacatattaaaaatcttgttgtggatgaagataatgaaggatgcact
ccattgcattatgcatgcaggcaaggtgtggccctctctgtaaataatttactcagcctc
aacgtttccatctactctaagagcagggacaagaagtcaccattgcactttgctgccagc
tatgggcgcatcaatacttgtcaacgacttataagagatatgaaagacacaagacttctg
aatgaaggtgataagaagggaatgactccccttcacttggcagcccagaatggtcatgag
aaggtagttcagtttcttctgaagaggggggccctctttctctgtgattataaaggctgg
acagccctgcaccatgctgccttcggaggatacactcgcacaatgcagatcattttggat
actaatgtgaagtgcactgacagagtggatgaggaagggaacacagctttgcacttggct
gcacgagaaggacatgcaaaagcagtgaggttacttctcgactatggtgcgaaaattctg
ttcaacaaagcagtggcttcttttttccatgaagcaatacacaataggagaaaagacgtg
gtgtctgctgtcattttgcacaaaagatgggaagaagctgttgtgacgttctctcactat
tccagtgccaataagtgtcctttgctggaaatggttgagtatcttcctgattcatttaaa
ctggtgctggacaactgcataattgagtcttcagaggaaaagacaagtcgagacttctat
attgaatataacttcagatatcttcagtgtcccttgacacttaacaggaaagtaaaggat
ggtgaagaaattttctatgaaccacttaccactctaaatgccatggtacgccacaatcgc
atggagctactcagtcatcctgtgtgtaaagaatatttgcttatgaaatggatggcctat
gggtttcgagcacatctaatgaatttaggcatatattctcttggtctcatcccactgact
cttctggtcactcacatacaaccaggaagacctttgaatggaacagagctctatgaagcc
agaccattagaatatgaggattcatacttcacgagggtgtgtatgtgtttagttttaatt
atgagtttactgggcatctgcaaagaaatatttcagctgattcagcagaaattgaaatat
ttgttggattactccaatctcctggactggaccatttatactacaagcataatttttgtg
tcttctttatttattaatacaccagctcatttgcagtgggaatgtggagcaattgctgta
tatttgtcttggatgaacttccttctttatcttcaacgatttgagaactatggaatctat
gttgtgatgttctgggaaattttgaggactttaattcggattgctgtggttttctttttc
ctgatactggcttttgggctgagtttctttgtccttttgggttcacagcaaacatacagc
acacctctgctttctgtaatgaagacatttgcaatgatgctgggagacattaattaccat
gatgcattccttgatcctttactaagcagtgaattgccatatccattcctgagttacaca
gtcctcattatattcaccttgcttattccaatcctgcttatgaacttgctaattggtttg
gctgttggtgatatcgctgaagtacagaaatatgctgcactcaaaaggattgcaatgcag
gttaaccttcacaccaacttagagaagaagctgccattttggttcttaagtcgggtggac
caggaatcaatcactgtatatcccaacaggccaagatactgtggatttatgagtgtgttc
caatattgctttgggtgtgaagactctaccacatatgcacagagccctgatacaacactg
gaactggaagttctgaagcagaaatacaggctcaaagatatatcaacattgttggaaaag
caacatgacctcattaaactgattatccaaaaaatggagatcgtgtcagaggctgaggat
gaagacagcaatgatttatttcagcacaaatttaggaaaaggcagctagagcacaaaaat
agtaaatgggatacagtgttaaaagctgttaaaacgaatgtgcctaacccaagcacagaa
aagaacagcttcttctag
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