Parus major (Great Tit): 107214778
Help
Entry
107214778 CDS
T04864
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107214778 (SOX13)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
107214778 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
CREPT
EIF4E-T
Motif
Other DBs
NCBI-GeneID:
107214778
NCBI-ProteinID:
XP_033375745
Ensembl:
ENSPMJG00000017507
LinkDB
All DBs
Position
26:complement(5041211..5065289)
Genome browser
AA seq
587 aa
AA seq
DB search
MSMRSPVSPPPELDGAGAMVNCAIKTEEKKEGGPETPPGAAPGAEPRPHEPPGPLARDGT
DPQALPQESCSPSRDIPEPRRSAFEPAGSGQEKLDFNRNLKEVMPTIEKLLSSDWKERLL
GRNTAESKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMATMLFEKQQQQM
ELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFTPGHQPLPVTPESQLA
LPIQPIPCKPVDYPVQLLHSPPPPTLKRPAGPGHLQMQETSQPLNLTAKPKGSELPSASS
SPSLKMSGCQSLPPGHGASRELQSSPSSLPLGFLGEGDAITKAIHDARQLLHGHGAAMEG
SLSSPYRKEHVGIDSSPVKERMEETPGHRLDEALLSCEMDGSRHFPESRNNNHIKRPMNA
FMVWAKDERRKILQAFPDMHNSSISKILGEIPGQDPLCIPLRDGNEILGWGISSNIPHSC
PCDPSLPSQCPSPVSHRPQGSQVPPSSSDVLYPRPVGVQLPPPLLEHYLPRGVDPTMPVI
VNTRSLKDGDTGDDGHSVAEGDMYRYSEDEDSEGEDKSDGELVVLTD
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccccgtgtccccacccccggagctggatggagcgggcgccatggtg
aactgcgccatcaagacggaggagaagaaggagggcggccccgagaccccgccgggggct
gcccccggtgccgagccccggccccacgagcccccggggccactggccagggatggcacc
gacccccaggccctgccacaggaatcctgctctccctccagggacattcccgagccccgg
cgctccgccttcgagccggctggcagcggccaggagaagctggacttcaacaggaacctg
aaggaagtgatgccaaccatcgagaagctgctgtccagtgactggaaggagcggctgctg
ggccggaacacggctgaatccaaggaagtgaaaggaacccaggagagcctggcagagaag
gagctgcagctgctggtgatgatcaaccagctgtccacgctgcgggaccagctgctgacg
gcgcactcggagcagaagaacatggccaccatgctcttcgagaagcagcagcagcagatg
gagctggcccggcagcagcaggagcagatcgccaagcagcagcagcagctcatccagcag
cagcacaaaatcaacctcctacagcagcagatccagcaggtcaacatgccctacgtgatg
atccccgccttcacccccggccaccagcccctcccggtcacccccgagtcccagctggcg
ctgcccatccagcccatcccctgcaaaccagtggattacccggtgcagctcctgcacagc
ccccctcctcccacgctgaagagacccgcgggcccgggccacctccagatgcaggagacc
tcgcagccactgaacctgacggccaaacccaaaggctccgagctccccagtgcctccagt
tcgcccagtttgaagatgagcggctgccagtcgctgccgccgggccacggggccagcagg
gagctgcagagcagcccgtccagcctccctctgggattcctgggagagggcgatgccatc
accaaagccatccacgacgcgcggcagctgctgcacggccacggtgccgccatggagggg
tcactcagcagcccctaccgcaaggagcacgttgggatcgattcctccccggtgaaggag
cggatggaggagacccctggccaccggctggacgaggctctgctgagctgcgagatggac
ggctcccggcacttcccggagtccaggaacaacaaccacatcaagcggcccatgaacgcc
ttcatggtgtgggccaaggacgagaggaggaagatcctgcaggccttcccggacatgcac
aactccagcatcagcaagatcctgggtgagatcccgggacaggatcccctctgcatcccc
ttgagggatgggaatgagatcttgggatggggaatctcctctaacatcccccacagctgt
ccctgtgacccctcgctgccctctcagtgcccgtcccccgtgtcccacaggccacagggc
agccaggtgccccccagctcctcggacgtgctgtacccgcggccggtgggcgtccagctg
cccccgcccctcctggagcattacctgccccgcggcgtggaccccaccatgcccgtcatc
gtcaacacccgcagcctcaaggacggtgacaccggggacgacgggcactcggtggccgag
ggggacatgtaccgctacagcgaggacgaggactcggagggcgaggacaagagtgacggc
gagctggtggtgctgacggactga
DBGET
integrated database retrieval system
