Parus major (Great Tit): 107214856
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Entry
107214856 CDS
T04864
Symbol
LRIF1
Name
(RefSeq) ligand-dependent nuclear receptor-interacting factor 1 isoform X1
KO
K23220
ligand-dependent nuclear receptor-interacting factor 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107214856 (LRIF1)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107214856 (LRIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRIF1
Motif
Other DBs
NCBI-GeneID:
107214856
NCBI-ProteinID:
XP_015506069
Ensembl:
ENSPMJG00000004634
LinkDB
All DBs
Position
26:205789..217447
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AA seq
764 aa
AA seq
DB search
MSRSPEQRPQFIAGCMYRVIQTTGPDGKKLLKLLPISKTSGSFVPIVQSPAMPNNSNANV
SSPVHLTFKTQLGNTAAPSSVKIPIFQPPNPGKIILRRTLDKQESARAGSEKESSIPSAA
VNSQSSCVPMDGVSLQNVVITSSSHQSSTTYMVVNTKSLPVTAKSAVLPSGHHLQIPADA
EVKSVPASLLPPAIQQKILAAAATSVSGGADGTKTPTVIYVSPVNTVKTSQVLPKCLQSF
CPKSAMEVSKTLVVTAGQKGSGSSPEPVTPEGQQCQQAPMKWIVQETAPLSAACLIPVKS
SNNVASKILKTLSDMKNVEVNTANILPLCSSGPGGSQTKITPLKDNALVMYNGKIYLLTK
RGSDVLSAQADKQTSSSSDALLKKEAPKQIDSTEVNKTTSKVVNLVLSSKGVVLSQKDPN
PCTVSTNSSPVGLRNDLKSTSAALLTASADQQDPTVIQRQNLPFTKSISCSGVIPVPAVG
MQESVWQNGKDTSHSPRAAVLPQAKQECAVSEEWPKIQCEKMDSPGKVIQIKHQENQHWR
QFLELRKKFGLSKEERVYLTRIPLRAFCESPEEGVCSSDSLERKNDSCSSSSLDVEIMNH
HQECVKEKKIAVDLEEDLTRRRKIKSSPLLDSGKRRRTSTKSATSPSLEVSSSSCSAVSR
SVSPPAAPPPPAVPTGSAGASQGRDSEQDAFPRCSDTAHPGISLLLNPEEDASVLEGSFR
DDAFPVAPPDLDETIRDEKIKRLKQLLREREAALEEMRREMQQS
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggagccctgagcagcggccgcagttcattgcaggatgtatgtaccgagtcatt
cagacaacgggaccagatgggaaaaaacttctgaaattgcttcccatttctaaaacttct
ggaagctttgtgccaatagttcagtctccagccatgccaaataattctaatgcaaatgtt
tctagcccagtccatcttacttttaagacacagcttggcaatactgctgcaccttcatct
gttaagatacctatttttcagcctcctaatcctggaaagattattcttaggaggacatta
gacaagcaggaaagtgctagggcaggttctgaaaaggaaagctcgattccaagtgcagct
gtcaactcccagagcagctgtgtgcccatggatggagtgtccctgcagaacgtggtcatc
acaagctcctctcaccagagcagcacaacctatatggtggtgaacaccaaatccctccca
gtgactgccaagtctgcagtgctgccctccggacaccacctccagattccagctgatgca
gaagtgaagtctgtcccagcatctcttctgccacctgcaatacagcaaaaaatcctggca
gctgcagccaccagtgtgtctggaggggccgacggtacaaaaacgccgacggtgatttac
gtgtcacccgtgaacaccgtgaaaacctcccaagtcctgcccaagtgcttgcagagcttt
tgccccaaatctgccatggaagtttcaaagacactggtagtgacagctggccaaaaggga
tctggctcttctcctgagccagtcacacctgaggggcagcagtgccagcaggctcccatg
aagtggatcgtgcaagaaaccgcccctctctcagcagcttgtcttatccctgtaaagtct
tcaaataatgtggcttccaagatcctgaaaactttgtcagacatgaagaatgtagaagtt
aatactgcaaatattttgccactctgttctagtggtcctggtggaagccaaaccaaaatc
acacctttgaaagataatgctctggtcatgtacaatgggaagatctatttattgaccaaa
agaggctctgatgttctgtcagcccaggctgacaaacaaacatcttcctcttctgatgct
ttactaaaaaaggaggcacccaagcaaattgattctactgaagtcaataaaacaaccagt
aaagtggtgaatctggtgttgtcaagcaaaggagtggtgctgtctcagaaagacccaaac
ccatgtacagtctccacaaattcatcaccagttggcttaagaaatgacttaaaatccaca
tctgcagctctgcttacagcaagtgctgatcagcaggatcccactgtaatccagagacag
aatttgcccttcaccaagagcatttcttgcagtggagtgatcccggttccagcagtaggg
atgcaggaaagtgtgtggcaaaatggcaaagacacgagtcattccccacgagcagctgtg
ctacctcaggctaagcaggaatgtgctgtcagtgaagaatggccaaagatccaatgtgaa
aaaatggattcaccgggaaaggttattcagatcaaacaccaagagaaccaacactggaga
cagttcttggaattaaggaaaaaatttggtctctctaaggaggagagagtttaccttacg
agaataccattaagggccttctgtgagagtccagaagaaggggtttgttccagtgacagt
ttggaaaggaaaaatgattcttgcagttcatcctcattggatgtggaaataatgaatcat
catcaggaatgtgttaaagagaaaaagatagctgtggacctggaagaggatttgactagg
agaaggaaaataaaatcttcgcctttgttggacagtgggaagaggaggagaacttccacc
aagtcagccacaagtcccagtttagaagtcagcagctcgagttgcagtgcagttagcagg
agtgtgtcccctcccgcagccccaccgccgccggctgttcccacgggctctgctggggcg
tcccaagggagggactcagagcaggacgcgttcccccgctgcagcgacactgcccacccg
ggcatttcccttttactgaaccctgaagaggatgcttccgttctggaaggttctttccga
gatgacgccttccccgtggctcccccagacctggatgagacaatccgcgatgaaaaaatc
aagcgactgaagcagctgctgcgggagcgcgaggcggcgctggaggaaatgcgccgggaa
atgcagcagagctga
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