KEGG   Parus major (Great Tit): 107214918
Entry
107214918         CDS       T04864                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
pmaj  Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:pmaj01009]
    107214918 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmaj03036]
    107214918 (KDM5B)
Enzymes [BR:pmaj01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     107214918 (KDM5B)
Protein phosphatases and associated proteins [BR:pmaj01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     107214918 (KDM5B)
Chromosome and associated proteins [BR:pmaj03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107214918 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID JmjN zf-C5HC2 PHD_2 Lipoprotein_20 Exo70_N PHD_5
Other DBs
NCBI-GeneID: 107214918
NCBI-ProteinID: XP_015506215
Ensembl: ENSPMJG00000007609
LinkDB
Position
26:complement(1005597..1058870)
AA seq 1521 aa
MAEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLH
FTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEQGG
FDVVCKERKWTKIATRMGFAPGKAVGSHIRAHYERILYPYNLFQSGASLLCLQKPDLSSD
TKDKEYKPHDIPQRQSVPPSESCPPARRAKRLTPEATNVKTETDPPEARTHNLRRRMGCA
PPKSEGDKEMRSVVKLPEKKELSGEPEKDKSKVRSKKPTNAVDLYVCLLCGSGNDEDRLL
LCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKPQEAFGFEQAARDYTLRTFGEM
ADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRGGKF
KVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWS
YSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHG
VPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLNRYC
VFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEEEKRLREKVDKLGVTDSERVTFELF
PDDERQCLKCKTTCFMSAVYCPCKPGLLVCLYHIEDLCSCPTYKYKLGYRYTLEELYPMM
NALKMRAESYNEWASNVNEALEAKINNKKSLISFKALIEESEVKKFPDNDLLRHLRLVTQ
DADKCASVAQQLLNGKRQTRYRSGGGKCQNQLTVNELRLFVRQLYALPCVLSQTPLLKDL
LDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLPELRTRLEQARWLEDVQL
GCSEHSSLTLDDMRRLIDSGVGLSPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ
SLSSLAAAVKELEEIPAYLPNGAALKDAVQKAKDWLQEVEALQVGGRVPVLDTLAELVTR
GRSIPVHLDYLPRLEALVAEVQVWKECAANTFLCENSPYSLLEVLCPWCDIGMLSLKRKQ
KKLKEPVPSGKKKSTKLETLSDLERALSESKDTASAMATLGEARLREMEALRALRAANEV
KVLSSEEDAELKVCLCQKEPTASMIQCELCRGFFHTGCVPVAGAAPGPRVWLCPHCQRSK
KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKRIQDKVGSG
LLYSRWQGPAGQLPETNKVSQTIGAMSFSMPHDWDNRTVYLHSPFSTGQHCIPLHVISTE
LDELMMEAQLLQVSLPEIQELYQALFTKQSPALQPEQRSPSAATSEKNECCRGKKDGIGY
MERKLKRRFERESFCGEKRARVKKMRTPKKKKLKLSHSKDVCSNKLERERERLLELQRSS
DSHLLASDTSFSEQEDSEDEDAICPAVNCLQPEGDEVDWVQCDGSCNQWFHQVCVGISPE
MAEKEDYICTSCAGKDAQYRK
NT seq 4566 nt   +upstreamnt  +downstreamnt
atggccgagttcctgcccccgcccgagtgccccgtcttcgagcccagctgggaggagttc
gccgaccccttcgccttcatccacaagatccggcccatcgccgagcagaccggcatctgc
aaggtgcggccgccgccggactggcagcctccattcgcatgcgatgtcgacaagcttcac
ttcacaccgaggatccagaggctcaatgaactggaggcccaaactcgtgtaaagctgaat
tttctggaccagattgcaaagttttgggagcttcaaggatgcacactgaaaattccacat
gtggagaggaagatcttggatttatttcagcttaacagactagttgcagaacaaggagga
tttgatgtcgtttgcaaggagagaaaatggaccaaaatagccacgaggatgggctttgct
cctggcaaagccgtgggctcgcacatccgcgcgcattacgagcgcattctctacccctac
aacttgttccagtcaggagcgagtctcttgtgcttgcagaagccagatctgagcagtgac
acgaaggacaaggagtacaagccccatgacatcccgcagcgacagtcggtgccgccgtcg
gagagctgcccgcccgcccgccgcgccaagcgcctgacgcccgaggcaaccaatgttaaa
actgagactgaccctccagaggccagaactcacaatctgagacgcagaatgggctgtgcc
cctccaaagagtgaaggtgacaaggaaatgcgcagtgtggtgaaactccctgagaagaaa
gaactttctggggagccagagaaggacaaatccaaagtcagatctaaaaaacccaccaat
gctgtggatttgtatgtgtgtctcctgtgtggcagtgggaatgatgaggacaggctcctg
ctgtgtgatggctgtgatgacagttaccacaccttctgtttaattccacccctccatgat
gttcccaagggggactggaggtgtccccagtgtctggctcaggagtgtaacaagcctcaa
gaagcctttgggtttgaacaagcagcacgagactacaccctccgcacatttggggaaatg
gctgatgccttcaagtcagactattttaacatgccagtacacatggtccccactgagctg
gttgaaaaagaattttggagacttgtcagtaccattgaagaggatgtgacagtggaatat
ggagctgacattgcttcgaaggagtttggcagtggcttcccagttagaggtgggaagttt
aaagttagaccagaagaagaggaataccttgatagtggctggaatttaaacaacatgcct
gtgatggagcagtctgtgcttgctcacatcactgcagacatctgtgggatgaaattgccc
tggctgtacgtaggaatgtgcttttcctcattttgttggcatatagaagaccactggagc
tattccattaactatctgcattggggggagcctaaaacgtggtatggagccccagggtac
gcagctgagcagctggaggatgtaatgaagaaacttgctccagagctatttgagtcccag
ccagatctcttgcaccaacttgtcaccataatgaacccgaacactttgatggcccacggg
gtgcctgtgtacagaaccaaccagtgtgctggggagtttgtcatcacctttcccagagct
taccacagcggcttcaaccagggcttcaactttgctgaagctgtgaacttctgcaccgtg
gactggctgcccctgggccggcagtgcgtggagcattaccggctgctcaaccgctactgc
gtcttctcccacgacgagatgatctgtaaaatggcttccaaagcagatgtcctggatgtt
gtggtggcatctacagtccagaaagacatggctattatgattgaagaggagaagaggttg
cgtgagaaggttgataaactgggagtgactgactcggagagggtgacgtttgagctgttc
cctgatgatgagcgacagtgcctgaagtgtaaaaccacttgcttcatgtcagcagtttat
tgtccctgcaagcctgggttgttagtgtgcttgtaccacattgaggacctctgttcctgt
cccacctacaaatacaaactggggtaccgctacaccctggaggagctgtacccgatgatg
aacgcgctcaagatgcgcgcagagtcctacaacgagtgggcttccaacgtcaacgaggcc
ctggaggcaaagatcaacaacaaaaaaagtctcatcagttttaaggctttgatagaagaa
tcagaagtgaaaaagttcccagacaatgacctgctgcgacacctccggctggtgacgcag
gacgcagacaaatgtgcttcagtggcccagcagctgttgaatggcaagagacagaccagg
taccgctccgggggagggaagtgccagaaccagctgacggtgaacgagctgcggctgttt
gtgaggcagctctatgccctgccctgcgtcctcagccagacaccactgctgaaggatctc
ctggaccgtgtggaagctttccaacagcaaagccaaaagctcctttctgaagagatgccc
agtgctgccgagctgcaggagctgctggacgtcagctttgactttgacgtggacctgccg
cagctgccggagctgcggacgcggctggagcaggcgcgctggctggaggacgtgcagctg
ggctgctcagagcacagctccctcactctggatgacatgaggcgcctcattgactccggg
gtggggctctcaccctaccccgcggttgagaaggcgatggcgaagctgcaggagctcctc
accgtgtctgagcactgggatgacaaagccaggaacctgataaaggccaggcccaggcag
tccctgagcagcctggcagcagcagtgaaggaactggaggagatcccagcctacctccca
aacggagcagcactgaaggatgcggtgcagaaggccaaggactggctgcaggaggtggag
gctctgcaggttgggggccgtgtgcctgtgctggacacgctggcagagctcgtcacgaga
ggtcgatccatcccagtgcacctggattacctgcccaggctggaggccctggtggctgaa
gtgcaggtgtggaaggagtgtgcagcaaacaccttcctgtgtgagaactctccgtattcc
cttctggaggtgttgtgtccctggtgtgacattgggatgctcagtctgaagaggaagcag
aagaagctgaaggagccagtgccaagtggcaagaagaaaagcactaagctggagacactg
agtgacctggagcgggcgctctccgaaagcaaggacactgcgtctgcgatggccacgctg
ggagaagcccggctgagggagatggaggcgctgcgtgccctgcgagcagccaacgaggtg
aaggtgctgtcgagcgaggaggacgccgagctcaaggtgtgtctgtgccagaaggaaccc
actgcttccatgatccagtgtgagctctgcaggggcttcttccacaccggctgcgtccct
gtggccggcgccgcgccggggccgcgcgtgtggctgtgcccgcactgccagcgctccaag
aagccgcctctggagaagatcctgccgctgctggcatccctgcagcgcatccgcgtccgg
ctgcccgagggggatgccctgcgctacatgatcgagagaactgtgaactggcagcacaga
gcacaacaaatgttgtattcagggaatctaaaacgcatccaggacaaagttggctcagga
ttactgtacagcaggtggcaaggcccagcgggccagctgccagagacaaacaaggtgtcc
cagacaattggagcaatgtcattttccatgcctcatgactgggataacagaactgtgtat
ttgcattctccattctctacaggacagcactgcatcccacttcatgtcattagcactgag
ctggatgagctgatgatggaagcccagctgctgcaggtttctttgcctgagatccaggag
ctgtaccaggccctgttcacgaagcagagccctgccctgcagccggagcagaggtcaccc
agtgcagccacaagtgagaagaatgagtgttgccgagggaagaaggatgggattggttac
atggagagaaagctgaagcggcgttttgagagagagagcttctgtggtgagaagagagcg
agagtaaaaaagatgagaacacccaaaaagaagaaactgaaactgagtcattcaaaggat
gtgtgcagtaacaaactggagagagagcgggagcggctcctggagctgcagcgttccagt
gacagccacctgctggcctcagacacgtcgttctcagagcaggaggactccgaggatgag
gatgccatctgcccagctgtgaactgcctccagcccgagggggatgaggtcgactgggtc
cagtgtgatggcagctgcaaccagtggttccaccaggtgtgtgtgggcatctccccagag
atggcagagaaggaggattacatctgcaccagctgcgccgggaaggacgcccagtaccga
aagtaa

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