KEGG   Parus major (Great Tit): 107215078
Entry
107215078         CDS       T04864                                 
Symbol
CASC3
Name
(RefSeq) protein CASC3
  KO
K14323  protein CASC3
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj03013  Nucleocytoplasmic transport
pmaj03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107215078 (CASC3)
   03015 mRNA surveillance pathway
    107215078 (CASC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmaj03019]
    107215078 (CASC3)
Messenger RNA biogenesis [BR:pmaj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107215078 (CASC3)
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 107215078
NCBI-ProteinID: XP_015506525
Ensembl: ENSPMJG00000017937
LinkDB
Position
27:1101288..1112378
AA seq 638 aa
AAESECESEDGIEGDAVLSDYESAEDSEAEEEDYSEEESSKVELKQDSNDSCESAARGEK
GSEKADPKGAVTGERQSGDGQESTEPVEKKVGKKVPKHLDDDEDRKNPAYIPRKGLFFEH
DLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKTRQELIALYGYDIRSAHNPD
EIKPRRMRKPRFGSPPQRDPNWSNERPPKPPRHQGAKSPSAPPRSFNNRSSASTGRMPPA
RNYPRMGGYKETRPGYRASEATVPHRNGEQAKQESGYRGKRAEQSPSRDTSPELEMAHVH
GSPGKEEGALENQATAADAAQPPPDRPVEKKSYSRARRTRVKAGEAGKLAEEVPASEGLA
PAIPKPTPAETSPPPAKSNWESSVESSVDGLEQEMTQMNLTEQNWSPGQSQFIPPREMRG
IPNHVHVGTGPPPQFNRMEEMAVPGGRVKRYSSQRQRPPVPEPAPPMHISIVEGHYYDPL
QFQGPIYTHGENPAPLPPQGMIVQPEMHLPHPGLHAHQTPPAMANPGLYPPPVSMPPGQP
PPQQLLTPTYFSAPGVMNFGNPGYPYPPGALPPPPPPHLYSNTQAQSQVYGGVTYYNTVQ
QQVQPKPSPPRRTSQPVTIKPPPPEDSKGEKSKERSNT
NT seq 1917 nt   +upstreamnt  +downstreamnt
gcggccgagtcggagtgtgaaagcgaggatggcatcgaaggagatgccgtgctctccgac
tatgaaagcgccgaggactcggaggcagaggaagaggattacagcgaggaagaaagctcc
aaggtggagctgaagcaggacagcaacgattcctgcgagtcggcagccagaggggagaag
gggagtgagaaggcggatcccaagggagcggtgacgggcgagcggcagagcggggacggg
caggagagcacggagcctgtggagaagaaagttgggaagaaggttcccaagcacctggac
gacgatgaggatcggaagaacccggcgtacatcccgcgcaaggggctcttctttgagcac
gacctccgagggcagacgcaggaggaggaggtcaggccaaagggtcgtcagcggaagctg
tggaaggacgaggggcgctgggaacacgacaagttccgtgaggatgagcaggcccccaag
accaggcaggagctgatcgcgctgtatggatatgacatccgctcagcccacaaccccgac
gagatcaaaccccgcaggatgcgcaaacctcggtttggcagtccccctcagcgagacccc
aactggtccaacgagaggccccccaagccccccaggcaccagggtgccaagagcccctca
gctcctccacggtccttcaacaaccgcagctctgccagcactggcaggatgccccctgcc
agaaactaccccaggatggggggctacaaggagacccgtccaggctaccgggcttcggag
gcgaccgtcccacaccggaacggggaacaagccaagcaggagagcggctaccgcgggaaa
cgtgcagagcagagcccgtcaagggacacgtcccctgagttggagatggcacatgtccac
ggcagccctgggaaggaggagggggctctggaaaaccaagccacggctgctgacgctgca
cagccgccaccagacagaccagtcgagaagaaatcttattcccgggcaagaaggaccaga
gtcaaggctggggaggcggggaagctggcggaggaagtgcctgcttccgaggggctggct
cccgcgattccgaaacccacgccggccgagacctcccccccgccagccaagagcaactgg
gagtcatcagtggaatccagcgtggatggacttgagcaggagatgacccagatgaacctg
acagagcagaactggagcccggggcagtcccagttcatcccgccccgggagatgaggggt
attcccaaccatgtgcacgtgggaactgggccaccaccgcagtttaaccggatggaggag
atggcagtgccggggggccgtgtgaagcgctactcatcgcagcggcagagaccccccgtg
cctgagcctgcgccccccatgcacatcagcatcgtggaagggcactactacgacccatta
caattccagggaccaatctacacccacggtgagaacccagccccgctgccgccccaaggg
atgattgtgcagccggagatgcacctccctcatccaggtttacacgcccaccagacgccc
cctgccatggcaaaccccggcctctaccccccaccagtgtccatgcccccgggccagccc
ccgccgcagcagctgctcactccgacttacttctccgcccctggagtgatgaatttcggg
aatcctggctacccctacccccctggagctctgccccctccgccccctcctcatctctat
tccaacacgcaggcgcagtcccaggtgtatgggggggtcacctactacaacactgtccag
cagcaggtgcagcccaagccctccccgccccgccggacgtcccagcctgtgaccatcaag
ccaccccctccagaggacagcaaaggtgaaaaatcaaaggagaggagcaacacgtag

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