KEGG   Parus major (Great Tit): 107215163
Entry
107215163         CDS       T04864                                 
Symbol
RAB5C
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj04137  Mitophagy - animal
pmaj04144  Endocytosis
pmaj04145  Phagosome
pmaj04148  Efferocytosis
pmaj05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107215163 (RAB5C)
   04145 Phagosome
    107215163 (RAB5C)
   04137 Mitophagy - animal
    107215163 (RAB5C)
   04148 Efferocytosis
    107215163 (RAB5C)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    107215163 (RAB5C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmaj04131]
    107215163 (RAB5C)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pmaj04147]
    107215163 (RAB5C)
   04031 GTP-binding proteins [BR:pmaj04031]
    107215163 (RAB5C)
Membrane trafficking [BR:pmaj04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    107215163 (RAB5C)
 Endosome - Lysosome transport
    107215163 (RAB5C)
Exosome [BR:pmaj04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107215163 (RAB5C)
  Exosomal proteins of other body fluids (saliva and urine)
   107215163 (RAB5C)
  Exosomal proteins of colorectal cancer cells
   107215163 (RAB5C)
  Exosomal proteins of bladder cancer cells
   107215163 (RAB5C)
GTP-binding proteins [BR:pmaj04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    107215163 (RAB5C)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 107215163
NCBI-ProteinID: XP_015506648
Ensembl: ENSPMJG00000001121
LinkDB
Position
27:complement(1659789..1672395)
AA seq 216 aa
MAGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPQNAPGGPGRNRVVDLQESSQPSRSQCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggtggagctgcccgaccgaatggaccagctgctgggaacaaaatctgc
cagtttaaacttgttctcttgggcgagtcagcggtggggaagtccagcctggtcctgcgc
tttgtgaaggggcagttccacgagtaccaggagagcacaattggagctgccttcctaaca
cagacagtgtgtctggatgacacaacagtgaagtttgagatctgggacacggcggggcag
gagcggtaccacagcctggcccccatgtactaccggggggctcaggcagccatcgtggtc
tacgacatcacgaacacagacacatttgtacgagccaagaactgggtgaaagagttgcag
aggcaggctagtcccaatattgtaattgcactagcaggaaacaaggcagaccttgctaac
aagagagctgtggacttccaggatgcacaaacatatgcagatgacaacagcttgctgttc
atggagacgtcagcgaagacagcgatgaatgtgaatgaaatcttcatggcaatagccaag
aaactgccaaaaaatgaaccccagaatgctcctggtggcccaggcaggaatcgggtggtg
gaccttcaggagagcagccagccgagcagaagccagtgctgcagcaactga

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