Parus major (Great Tit): 107215287
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Entry
107215287 CDS
T04864
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107215287 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107215287 (SMARCD2)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107215287 (SMARCD2)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107215287 (SMARCD2)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107215287 (SMARCD2)
PBAF complex
107215287 (SMARCD2)
GBAF(ncBAF) complex
107215287 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
107215287
NCBI-ProteinID:
XP_015506840
Ensembl:
ENSPMJG00000004236
LinkDB
All DBs
Position
27:complement(3505163..3512784)
Genome browser
AA seq
444 aa
AA seq
DB search
MPPGSRMPMAGLQVGPPGAPPYGAATPLRPGLPQAMMDPFRKRLLTPQAQPPMATPRRGV
KRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLR
IYISNTFTPAKEEGEGGERVASWELRVEGKLLEDPSKQKRKFSSFFKSLVIELDKELYGP
DNHLVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQT
RASIMQALWLYIKHNKLQDSHEKEFINCNRYFRQIFNCVRMRFSEIPMKLAGLLQHPDPI
IINHTISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDAKIHETIESI
NQLKTQRDFMLSFSNNPQDFIQEWIKSQRRDLKIITDVIGNPEEERRAEFYQQPWAQEAV
GRHIFAKVQQRRQELEQVLGIRLT
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgccccccgggagcaggatgcccatggcagggctgcaggtggggcccccaggagccccc
ccgtacggagcagcgaccccgctgaggcccggcctgccccaggccatgatggatccgttc
aggaagcgcctgctgaccccccaggcacagccacccatggccacccccaggagaggggtg
aagaggaggaagatggctgacaaggtgctgccacagaggatccgggagctggtcccagaa
tcccaggcctacatggacctcctggccttcgagcgcaagctggaccaaaccattgctcgg
aagaggatggagatccaggaggccatcaagaaacccctgacgcaaaagcggaagctcagg
atttacatctccaacaccttcaccccggccaaggaggaaggagagggcggggagcgtgtg
gcctcctgggagctccgtgtggaggggaagctgctggaggatcccagcaagcagaagagg
aagttttcctccttcttcaagagccttgtgatcgagctggacaaggagctctacgggccg
gacaatcacctggtggagtggcaccggatgcccacgacccaggagaccgacggcttccag
gtgaagcgtcctggggatgtcaacgtgaagtgcaccctgctgctcatgctggaccaccag
cccccccagtacaagctggacccacggctggctcggctgctgggggtgcacacccagacc
agagccagcatcatgcaggccctgtggctctacatcaaacacaacaaactgcaggacagc
cacgagaaggagttcatcaactgcaaccgctacttccgccagatcttcaactgtgtccgc
atgcgcttctccgagatccccatgaagctggcagggctcctgcagcacccggaccccatc
atcatcaaccacaccatcagtgtggaccccaatgaccagaagaagacggcctgctacgac
atcgacgtggaggtggacgatcccctcaaagcccagatgagcaatttcctggcttccacc
accaaccagcaggaaattgcctccctggatgccaagatccacgagaccatcgagtccatc
aaccagctgaagacacagagggatttcatgctgagcttcagcaacaacccccaggatttc
atacaggaatggatcaaatcccagaggagggacctcaagatcatcacggatgtgatcggg
aaccccgaggaggagcggcgggccgagttctaccaacagccctgggcgcaggaggccgtg
ggcaggcacatctttgccaaggtccagcagcgccggcaggaactggaacaagtgctcggg
atccgcctcacttaa
DBGET
integrated database retrieval system
