Parus major (Great Tit): 107215308
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Entry
107215308 CDS
T04864
Symbol
MED1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107215308 (MED1)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
107215308 (MED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
107215308
NCBI-ProteinID:
XP_015506887
Ensembl:
ENSPMJG00000017905
LinkDB
All DBs
Position
27:complement(808807..826273)
Genome browser
AA seq
1582 aa
AA seq
DB search
MKAAPGSAEEAEKLNKMSSLLERLHAKYSQNRPWTETMKLVRQVMEKRVVLNSGGHQHLV
SCLETLQKALKVSSLPAMTDRLESIARQNGLGSHLSANGTECYITSDMFYVEVQLDPTGL
LCDVKVAHHGENPVSCPELVQHLREKNFDEFSKHLRGLVNLYKLPGDNKLKTKMYLALQS
LELDLQKMAGMYWQATNANPLDKILHGSVGYLTPRSGGLLMNLKYYISPYDLFEDGTGAP
VVLHENNVPRSLGMNVSVTVEGTMAMHKLPIAPLIMGSHPVDSKGTPSFSSITSANSVDL
PACFFLKFPRPIPVSRAFIQKLQSCTGIPLLDTPPTFVPLYELITQFELSKEADPLPLNH
NMRFYAALPGQQHCYFLNKDAPLPDGRSLQGTLISKIAFQHPGRVPLILNLIRHQVAYNT
LIGSCVKRTVLKEDSPGILQFEVCPLSDSCFSVSFQHPVNDSLVCVVMDVQDSSHVNCKL
YKGLSDALICTDDFIAKVVQRCMSIPVTMRAIRRKAETIQADTPALSLIAETVEDMVKKN
LPPASSPGYGMTTGSNPMSGTTTPTNTFPGGPITTLFNMSISMKERHDSVGHGEDFSKVS
QNPILTSLLQITGNVGSTIGSSPTPPHHTPPPVSSPASNTKNHPMLMNLLKENPPQDFST
LYGSSPLERQNSSSGSPRMEMGPGGNKQKKKKSRMPADKPKHQTEDDFQRELFSMDVDSQ
NPIFDVNMTADTLDTPHITPAPSQCSTPPTTYPQALPHAQPSIQRMVRLSSSDSIGADVT
DILSDIAEEASKLPTSTEDCPPIGTPVRDSSSSGHSQSALFDPDVFQTNSGENPYTDPAD
LIADAAVSPNSDSSNHFFPDGVDFNPDLLNSQSQSGFGEEYFDESSQSGDTDDFKGYAPQ
ALTNLGVQVLGADGGENKFKGSAPSDTVDFSIIAAASKALGSSDIMEHHSGGQSPLLNTG
DLGKEKSQKRVKEGNGSGSAMAGAGMDGKPGKRSRTPSSDGKSKEKLPKRKKQETDGKSP
SHSSSNRPFTPPASTGGSKSPGSSGRSQTPPGVATPPIPKITIQIPKGTVTVGKPSSHGQ
YTSSGSVTSSSSKSHHSHSSSSSSSSSSSTSGKIKSKSEGSSGSKMSSSLYSSQGGSGSG
QSKGSAQSVGKPGSSPITKHGLSTGSGSTKMKPQGKPSSLMNPSMSKPNISPSHSRPSGG
SDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTGSSSSMKSSSGMGSSGSMSQKPPP
SSNSSTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKPSLTAVIDKLKHGVVTSGPGG
DDPMDGQMGPSSNSSSHTMSSKHNMSGGEFQGKREKSDKEKSKVSVSGGSVDSSKKNSDS
KNVGSTGVAKIIISKHDGGSPSIKAKVTLQKPGEGGGDGLRPQMASSKSYGSPLISGSTP
KHERCSPSHSKSPAYTPQNIDSESESGSSIAEKSYQNSPSSDDGIRPLPEYSAEKHKKHK
KEKKKVKDKDRDRERDRDKDRDKKKSHSMKPESWSKSPISADQSLSMASNAILAAERPSR
ASPEFLIGEEDDDLMDVALIGN
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcaccgggcagcgccgaggaggcggagaagctgaacaagatgagctccctc
ctggaaaggctccacgccaagtacagccagaaccggccctggacagaaaccatgaagttg
gtccgtcaggtcatggaaaagcgagtggtgctgaactcggggggacaccagcacctggtg
agctgcttggagactctgcagaaggccctgaaagtgtcgtctctgcctgccatgaccgat
cgcttggagtccatcgccaggcagaacggcctcggatcccacctgagcgcgaacggcacc
gagtgttacatcacctcagacatgttttatgtggaagtgcagctggaccctacagggctg
ctctgtgatgtcaaggtggctcaccacggagaaaaccctgtgagctgtccagagctggtg
cagcacctgagagagaaaaattttgatgagttttcaaagcatttgaggggacttgtgaac
ctgtataagctgccaggggacaacaaacttaaaactaaaatgtacttggctctgcagtcc
ttggagttggatctccaaaagatggccgggatgtattggcaagccaccaacgcaaacccc
ctggacaagatcctgcatggcagtgttggctatctcacccccaggagtggaggtctcctg
atgaacctcaaatattacatctccccctatgatttatttgaggatggcactggagcccct
gtggttttgcacgagaacaatgttcctcgctcgctgggcatgaacgtgtcggtgacagtc
gagggaaccatggcaatgcacaaacttccaattgctccactgatcatgggctcccacccc
gtggacagcaaaggaactccatctttctcctcgatcaccagcgccaacagcgtggacttg
cccgcttgtttcttcctgaagttcccacgtcccattccagtgtctcgagctttcatccag
aagctccagagctgcacaggtatcccactgttggacacaccacccacctttgtgcccctc
tacgagctgatcacgcagtttgagctgtccaaggaggccgatcccctgcccctgaaccac
aacatgcgcttctacgccgcccttccaggacagcagcactgttacttcctgaacaaagac
gctcctctcccagatggacggagcctccagggaactctgatcagcaaaatcgccttccag
caccccggcagggtgcccctcatcctcaacttgatccggcaccaggtggcctacaacacc
ctcatcggcagctgtgtcaagaggacagtcctgaaggaagattctcctgggatcctgcag
tttgaagtttgtcctctctctgactcctgtttcagtgtatccttccagcaccccgtgaac
gactccctggtgtgtgtggtgatggacgtgcaggactccagccatgtcaactgtaagctg
tacaaagggctgtccgatgccctcatctgcacagatgatttcattgccaaggttgtccag
aggtgcatgtccatccctgtcaccatgagagccatccgtaggaaagcagaaaccatccaa
gccgacacgccagccctgtccctcattgcagagacagtcgaagacatggtgaagaaaaac
ctgcccccggccagcagcccagggtatggcatgaccacaggcagcaacccaatgagtggg
accaccaccccaaccaacacttttcctggggggcccatcactactttgtttaacatgagc
ataagcatgaaagagaggcatgactcggtgggccatggggaggacttcagcaaagtgtct
cagaaccctattctcactagtttgttgcagatcacagggaatgtggggtctaccattggc
tcaagtccaacccccccccaccacacaccaccaccagtatcctcaccagccagcaacacc
aagaaccaccccatgctcatgaaccttcttaaggagaatccccctcaggatttctccact
ctgtatgggagcagccctctggaaaggcagaactcttcctctggctcccccagaatggaa
atgggccccggggggaataagcaaaagaaaaaaaaatcccgcatgccagccgacaagccc
aagcaccagactgaggatgatttccagagggagctcttttccatggatgttgactcccag
aaccccatttttgatgtcaacatgactgcagacactctggacacccctcatattactcca
gcacccagccagtgcagcactcctcccaccacctacccccaggcgctcccccacgcccag
cccagtatccagaggatggttcgcctgtccagctcggacagcatcggggccgatgtcacc
gacatcctctcggatatagcggaggaggcttccaagctgcccaccagtaccgaggactgc
ccacccattgggactccagtcagagactcttctagttcaggacattcacaaagtgccctc
tttgaccccgatgtttttcagaccaacagcggtgagaacccctacacagaccccgctgac
ctgatcgcggatgccgctgtgagccccaacagcgactcctccaaccatttttttccagac
ggggtagatttcaaccctgacttgctgaacagtcagagccagagtggttttggggaggaa
tacttcgatgagagcagtcagagcggggacaccgatgatttcaagggctatgccccccag
gctctaactaatttgggggtgcaagtcttgggggctgacgggggggaaaataaatttaag
gggagcgctccatccgatacggtggattttagtattattgcagctgccagcaaagcactg
gggtcctctgacatcatggagcaccacagtgggggtcagagccctttgctgaacacgggg
gatttaggaaaagagaagtctcagaaacgggtaaaggaaggcaatgggtctgggagcgcc
atggcaggtgccgggatggacgggaagccagggaagcgcagccggacgccatccagcgat
ggcaaaagcaaagagaaacttccaaagcggaagaagcaggagacggatgggaaatctccg
tcccacagttcatccaacaggcccttcacgccaccagcaagcacaggtgggtccaaatct
ccggggagttctggcagatcccagactcctcccggggtagctactcctcctattccaaaa
atcaccattcagatcccaaaaggaacggtgactgttggcaaaccgtcttcgcacggccag
tacacgagtagtggttctgtcacctcctccagcagcaaaagccatcacagccattcttcc
tcctcctcctcttcttcctcctcttcaacctcaggcaaaattaaaagcaaatcagaaggg
tcttctggctcaaagatgagcagcagcctgtactccagccaaggcggctccggttcgggt
cagtccaagggctcggcccagtctgtgggaaagccgggatcctcccccatcaccaagcac
ggcctcagcaccggctccggcagcaccaagatgaaacctcaaggaaagccatcgtccctc
atgaacccttccatgagcaaaccaaacatctccccgtcccactccaggccctcggggggt
tctgacaaactcgcctctcccatgaagcctgtcccaggcactcccccatcgtctaaagcg
aagtcgcccatcagttcaggttctggtgggtcccacatgtctgggactggatcgagctcg
agcatgaaatcgtcttcaggaatgggatcctccgggtctatgtcacagaaaccgcctccc
tcgtccaattcctccacggcatcttcatcttccttttcgtccagcgggtcttccatgtct
tcatcccagaaccagcacgggagctccaaagggaagtccccgagcagaaacaagaagcca
tctctgacggcagtcatcgacaagctgaagcacggggtggtgacgagcgggcctggcgga
gacgaccccatggatggacagatggggccgagttccaattcctcaagccatacgatgtcc
tccaaacacaacatgtctggaggggagttccagggaaagcgggagaagagcgacaaggag
aaatccaaggtctctgtttcgggaggatccgttgactcttccaagaagaactcggattcc
aaaaacgttggaagcactggagtggccaaaattatcatcagcaaacacgatggtggttcc
cccagcattaaagccaaagtaactctgcagaaacccggggaggggggcggggacgggctg
aggcctcagatggcttcttccaaaagctacggctcccccctgatcagcggctccaccccc
aaacacgagcgctgctcgcccagccacagcaaatccccggcctacaccccccagaacatc
gacagcgagagcgagtcgggctcttccatcgccgagaaatcctaccagaacagccccagc
tccgacgacggcatccggcccctgcccgagtacagcgccgagaaacacaagaagcacaaa
aaggagaagaaaaaggtgaaggacaaagacagggacagagagcgggaccgggataaggac
agggacaagaagaaatcccacagcatgaagcccgagagctggtccaagtccccgatctcg
gcggatcagtctctgtccatggccagcaacgcgatcctcgcggctgagcggccttcccgg
gccagccccgagttcctgatcggggaggaggatgatgatctcatggatgttgctctaatt
ggtaattaa
DBGET
integrated database retrieval system
