Parus major (Great Tit): 107215324
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Entry
107215324 CDS
T04864
Symbol
THRA
Name
(RefSeq) thyroid hormone receptor alpha
KO
K05547
thyroid hormone receptor alpha
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04080
Neuroactive ligand-receptor interaction
pmaj04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107215324 (THRA)
04081 Hormone signaling
107215324 (THRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaj03000
]
107215324 (THRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pmaj03310
]
107215324 (THRA)
Transcription factors [BR:
pmaj03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
107215324 (THRA)
Nuclear receptors [BR:
pmaj03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
107215324 (THRA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
107215324
NCBI-ProteinID:
XP_015506909
Ensembl:
ENSPMJG00000017925
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Position
27:1069843..1077506
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AA seq
408 aa
AA seq
DB search
MEQKPSTLDPLSEPEDTRWLDGKRKRKSSQCLVKSSMSGYIPSYLDKDEQCVVCGDKATG
YHYRCITCEGCKGFFRRTIQKNLHPTYSCKYDGCCVIDKITRNQCQLCRFKKCISVGMAM
DLVLDDSKRVAKRKLIEENRERRRKEEMIKSLQHRPNPSAEEWELIHVVTEAHRSTNAQG
SHWKQKRKFLPEDIGQSPMASMPDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSEL
PCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGVVSDAIFDL
GKSLSAFNLDDTEVALLQAVLLMSSDRTGLICVEKIEKCQETYLLAFEHYINYRKHNIPH
FWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaagcccagcaccctggacccgctgtcggagccagaggacacccggtggctg
gatgggaagcgcaaaagaaagagcagccaatgtttggtgaagagcagcatgtcagggtac
atccctagttacctggacaaagatgaacagtgtgtggtgtgcggggacaaggccaccggt
taccactaccgctgcatcacctgtgagggctgcaaggggtttttccgtcggaccatccag
aagaacctgcaccccacctactcctgcaaatacgatgggtgctgtgtcatcgacaagatc
acccgcaaccagtgccagctctgccgcttcaagaagtgcatctccgtgggcatggccatg
gacctggtgctggatgactcgaagcgggtagccaagcggaagctgatcgaggagaaccgg
gagcggcggcggaaggaggagatgatcaagtccctgcagcaccgccccaaccccagcgcc
gaggagtgggagctgatccatgttgtgacagaagcccaccgcagcaccaatgcccagggc
agccactggaagcagaagcggaaattcctgcctgaggacatcggccagtcccccatggcc
tccatgcccgacggggacaaagtcgacctggaggcgttcagtgagtttacaaaaatcatc
accccggccatcacccgcgtggtcgactttgccaaaaaactgcccatgttttcagagctg
ccttgcgaggaccagatcatcctgctgaaggggtgctgcatggagatcatgtcgctgcgg
gcggccgtgcgctacgaccccgagagcgagacgctgacgctgagcggggagatggcagtg
aaacgcgagcagctcaagaacggcggcctcggcgtcgtctccgatgccatcttcgacctg
ggcaagtccctctctgccttcaacctggatgacaccgaggtggccctgctccaggctgtg
ctgctcatgtcctcagaccggacggggctgatctgcgtggagaagatcgagaagtgccag
gagacgtatctgctggcctttgagcactacatcaactaccgcaaacacaacattccccac
ttctggcccaagctgctgatgaaggtgacggatctgcggatgatcggcgcctgccacgcc
agccgcttcctgcacatgaaggtggagtgtcccaccgagctcttcccccccctcttcctc
gaggtcttcgaggaccaggaggtgtag
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