Parus major (Great Tit): 107215355
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Entry
107215355 CDS
T04864
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107215355 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107215355 (SMARCC1)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107215355 (SMARCC1)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107215355 (SMARCC1)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107215355 (SMARCC1)
PBAF complex
107215355 (SMARCC1)
GBAF(ncBAF) complex
107215355 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_2
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
SWIRM-assoc_1
BRCT_2
BRCT
SpeFL
Motif
Other DBs
NCBI-GeneID:
107215355
NCBI-ProteinID:
XP_033368034
LinkDB
All DBs
Position
2:complement(62622..133887)
Genome browser
AA seq
908 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT
IYLIPDMELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSVDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHTNELDAEIEDPPIPEKPWKVHAKWILDTDVFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQAA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEDTVATGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMSHRLPEG
LVQALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQ
SGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGK
VDPTYGLESSCIAGTGPDEPDRMDGAEEEKMETETEGQAAEKVENKAESESEEGEKVPEG
ESERSVEKEPESEGAAEPKPEEKEAEENKENVDGSKDKEAEAGKKKVEHEISEGNVATAA
AAALASAATKAKVGAVPTPWPWLPGPAEPGELLGARAVPPLSPDTSQQHKCCLNVSCPSP
PEGDNDQEKARQGLSGAHLKCTIPNPALPFVPFLAQLEQQRQQLLTERQNFHMEQLKYAE
LRARQQMEQQHSQNPQQPHQHPSGAGMAPLGTPAHPGLLPHQQPPPYPMMHHQMPPPHPP
QPGQMLPGQPMAGRMMSSSIHPSPGAAPPGSTPPLGHPMAGNLIGPRVPLAAPNGMCKCP
GVILGFLC
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatataag
aacgaacagggctggaggaggtttgacctgcagaatccctcccgcatggatcgcaacgtg
gagatgttcatgaacattgagaaaacactggtgcagaacaactgtctgagcagaccaacc
atctacctcattcctgacatggagctgaagctggccaacaagctgaaggacattgtcaag
cgtcaccagggaacagtcactgaagagaaatccaaggccacccaccatgtgtatccaagt
cctacctcagtggatgatgatgagtggttgagacctgtgatgaaaaaggacaagcaggtg
ctggtacattggggcttttttccagacagctacgacacctgggtccacaccaacgagctg
gacgcggaaatcgaggatcccccgattcccgagaagccctggaaggttcatgccaagtgg
attttggacactgatgtgttcaatgagtggatgaatgaagaggattatgaggtggatgag
aacaggaaatccgtgagttttcgccagaggatctccatgaagaatgaagagcccgtgcgg
agccctgagaggagggacaggaaagcagcagccagtacaaggaaaaggaaacattcccct
tctccaccccccactcctgtggagtccaggaaaaagacagggaagaaaggccaagcagct
ctctatgggaaaaggagggggcagaaggaagaggatgagcaggaggatctcaccaaggac
atggaggaccccaccccagtgcccaacatagaagaagtggtacttcccaaaaatgtgaac
ccaaagaaggacagtgagaacacgcctgtgaaaggaggaaccgtggcagacctggatgag
caggatgaggacacagtggccactggagggaaggaggacgaggaccccaacaagggtgac
cagagccgctccattgaccctggggaggacaatgtcaccgagcagaccaaccacatcatc
atccccagctacgcctcctggttcgactacaactgcatccacgtgatcgagcgtcgcgcg
cttccggaattcttcaatgggaaaaacaagtccaagactccagaaatatacctggcctac
aggaacttcatgatcgacacgtaccgcctgaacccgcaggagtacctgaccagcacggcc
tgcaggaggaacctcaccggcgacgtctgcgccgtcatgagccacagactgcccgagggc
ctcgttcaggctctggagatgtacaaggacgactggaacaaggtgtcagagcacgtgggc
agccggacacaggacgagtgcatcctgcacttcctgcgcctgcccatcgaggatccctac
ctggagaactcggacgcctctctgggacccctggcctaccagcccgtgcccttcagccag
tctggcaaccctgtcatgagcaccgtggccttcctggcctctgtggtggatcctcgtgtg
gcctcagctgcagccaaggctgccctggaggagttttcccgggtgagagaggaggtgccc
ctggagctggtggaagcccacgtgaagaaggtgcaggaagcagctcgagcctcggggaag
gtggatccaacctacgggctggagagcagctgcatcgcgggcaccggccccgacgagccc
gacaggatggatggagccgaggaggagaagatggaaaccgagacagagggacaggcggcc
gagaaggtggagaacaaagccgagagtgaatctgaggagggagagaaggtcccggaaggg
gaaagcgagcggagcgtggagaaggagccagagagcgaaggggctgcagagcccaagcca
gaggaaaaggaggcagaggagaacaaggagaacgttgatggcagcaaggacaaagaggcc
gaggctgggaagaagaaagtggaacacgagatctcggaagggaacgtggccacagctgca
gctgctgccttggcctctgctgccaccaaagccaaggttggtgctgtcccaacaccctgg
ccttggctcccagggccagcagagcctggagagctccttggtgccagagcagttccccct
ctgagccctgacacctcccagcagcacaagtgctgccttaatgtctcctgcccgagcccc
cctgagggagataacgaccaggaaaaggcaaggcagggattgtcaggagcacatttgaaa
tgcaccatccctaacccagctctgccttttgtcccgttcctggcacagctggagcagcag
aggcagcagctgctgaccgagcgccagaacttccacatggagcagctcaagtacgccgag
ctgagggctcgccagcaaatggagcagcagcacagccagaacccccagcagccccaccag
caccccagtggggctggcatggcccctctggggacaccagcccaccctgggctgctgccc
caccagcagcccccgccctaccccatgatgcaccaccagatgcctcctcctcacccacct
cagccaggtcagatgctccctggacagcccatggcaggcaggatgatgtcctccagcatc
caccccagccctggggctgccccccctggcagcaccccaccgctggggcaccccatggcc
gggaacctcatcgggccccgcgtgccgctggcagctcccaacggaatgtgtaagtgtcct
ggggtgatcctggggttcctctgc
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integrated database retrieval system
