KEGG   Parus major (Great Tit): 107215441
Entry
107215441         CDS       T04864                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
pmaj  Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pmaj03036]
    107215441 (KDM4B)
Enzymes [BR:pmaj01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     107215441 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     107215441 (KDM4B)
Chromosome and associated proteins [BR:pmaj03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107215441 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C Tudor_3 Rad9_Rad53_bind DUF4537
Other DBs
NCBI-GeneID: 107215441
NCBI-ProteinID: XP_015507084
Ensembl: ENSPMJG00000012891
LinkDB
Position
28:4552957..4618985
AA seq 1078 aa
MGSENPSPQNPGCKIMTFRPSLDEFRDFGRFIAYMESQGAHRAGLAKVIPPKEWKPRRTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDADVDEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYDLWKQGKDIAVLDHMKPTALSSPELDAWNE
TKADLKAKLLRRIGDEEEDNKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVKVKEE
LKRGPDLEEEERSKGMEGEAGEGRAKARPPKAKGERKKKQQPFPPQPPVLPGPGPQQPAQ
AGPGPARPPPAPLNVVQPSEAAEEEDFKPRPIIPMLYVVPRSKKVVFDKEHMSCQQAFEQ
FATQKGLGWREQGPLQSPGKDGAGAEAERAELTAEAASAFSKMKMEIKKSRRHPLGKPPT
RSPLSVVKQETSSDEETFPFSGEEDMSDPEALKSLLSFQWKNKAFNFPAERKFNAAAALS
EPYCAVCTLFYPYNQSSQVEKEAAPVSSGESSFLHLSKCGQKTKPLIPEMCFTSSGENTE
PLPANSYIGEDGTSPLISCAKCCLQVHASCYGIRPELVNESWWCSRCSAGAWAAECCLCN
LRGGALQMTTDGRWVHVICAIAVPEARFLNVIERHPVDISAIPEQRWKLRCVYCRKRMRK
VSGACVQCSSEHCSTSFHVTCAHAAGVPMEPDDWPYVVSITCFKHKAANQSVPFRREVAL
GQTVITKNRNGLYYRCRVIGTTTQTFYEVNFDDGSYSDNVYPESIISRDCIQMGPPPEGE
LVQLQWTDGIIYKAKFIAAQISQIYQVEFEDGSQLMVKRGDIYTLEEELPKRVKSRLSLS
TGAPQEDVFSGDEVRAAKRPRLGNPRNPEEYGQTPDYLAFMESLLQTQYQPGTQSNMF
NT seq 3237 nt   +upstreamnt  +downstreamnt
atggggtcggaaaacccgagcccgcagaaccctggctgcaagatcatgaccttccgtccc
tccctggacgagttccgcgatttcgggaggttcatcgcctacatggagtcccagggagcc
cacagggcagggctggccaaggtgatcccccccaaggagtggaagccgcggcggacgtac
gatgacatcgatgacatggtgatcccagctcccatccagcaggtggtcacgggccagtcg
gggctcttcacccagtacaacatccagaagaagcccatgaccgtgggcgagtaccggcgc
ctggccaacagcgagaagtactgcacccctcggcaccaggacttcgaggacctggagcgc
aagtactggaagaacctgacctttgtgtctcccatttatggggctgacatcagtggctcc
ctgtatgatgcagacgtggatgagtggaacattggcaatctgaacaccctcctggacatg
gtggaacacgagtgtggcatcatcatcgagggtgtgaacactccctacctctactttggc
atgtggaagacaacttttgcttggcatacagaggacatggatctctacagcatcaactat
ttgcattttggggagcccaaatcctggtatgccattcccccagagcacggcaagaggctg
gaacgcctggccaaaggatttttcccaggaagctctcagggatgtgacgctttcctccgg
cacaagatgaccctcatttctccctccatcctgaagaagtatggcattccctttgacagg
atcacccaggaagctggggagtttatgatcacatttccttatggttaccacgctggcttc
aatcacggcttcaactgcgccgagtccaccaacttcgccacgctgcgctggatcgactac
ggcaagatggcaacacagtgcacgtgccgcaaggacatggtgaagatctccatggacgtg
ttcgtgcgggtgctgcagcccgagcgctacgacctctggaagcagggcaaggacatcgct
gtcctggaccacatgaagcccacggccctcagcagccccgagctcgacgcctggaacgag
accaaggcagacctgaaggcgaaactgctccgcaggataggagatgaggaagaggacaac
aaacaccggtctcacagaaaaaggagtcaacccagaagacacaaaacagaggatcagaag
tctcttggggatgtcatggctattgaaactgccttggaagatgtgaaagtgaaagaggag
ctgaaaagggggccggatctggaggaagaggagagaagcaaagggatggagggagaagca
ggggagggcagggccaaggcgcggcccccgaaggccaagggcgagcggaagaagaagcag
cagccgttccccccgcagccgccggtgctgcccgggccgggccctcagcagcctgcccag
gccgggccgggcccagcgcggccgcccccggccccgctgaacgtggtgcagccctcggag
gccgccgaggaggaggacttcaaaccgcggcccatcatccccatgctgtacgtggtgccc
cgcagcaagaaggtggtgttcgacaaggagcacatgtcctgccagcaggccttcgagcag
ttcgccacgcagaaagggctgggctggcgcgagcagggcccgctccagagccccggcaag
gacggggccggcgccgaggcggagcgcgcggagctcactgcggaggctgcttctgccttc
tccaagatgaagatggagatcaagaagagccgccggcacccgctgggcaagcccccgacg
cgctcgccgctgtccgtggtcaaacaggagacctcgagtgacgaggaaacgtttccattt
tctggagaggaagatatgagtgatccagaggctttgaaatctttactttccttccagtgg
aagaacaaagcatttaatttcccagcagaaaggaagttcaatgcagctgctgccctgagt
gagccatactgtgctgtctgcaccctcttctacccctataaccagtcctcccaggtggag
aaggaagctgccccggtctcctcaggggagtcctcgttcctgcatctttccaagtgtggg
cagaagaccaagcccctgatccctgagatgtgctttacctcaagtggagaaaacaccgag
ccccttcctgcaaattcctacatcggagaggatggaaccagtcccttgatatcctgtgcc
aaatgctgcctgcaggttcatgctagctgttacgggatacggccggagctggtgaacgag
agctggtggtgctcgcggtgctcggccggcgcgtgggcagcggaatgctgcctgtgcaat
ctcaggggaggagctctccagatgaccactgatggccggtgggtccacgtaatctgtgca
attgctgtccccgaggcgcgtttcctcaatgtcatagagcgtcatcctgtggatatcagc
gccatccccgagcagaggtggaaactgaggtgtgtgtactgccggaagaggatgaggaag
gtgtcgggggcctgtgtgcagtgctcctccgagcactgctccacgtcgttccacgtgacg
tgcgcgcacgcggccggcgtgcccatggagcccgacgactggccctacgtcgtgtccatc
acctgcttcaagcacaaagcagcaaaccagagcgtcccgttccggagggaggtggccctg
gggcagacagtgatcaccaagaacaggaacgggctctactatcgctgcagggtcatcggc
accaccacccagaccttctacgaagtcaacttcgacgatggctcctacagtgacaacgtt
taccccgagagcatcattagcagggactgcatccagatggggccccctcccgagggggag
ctggtgcagctgcagtggacggacgggatcatctacaaggccaagttcatcgcagcccag
atcagtcagatctaccaggtggagtttgaagatggctcccagctaatggtaaagcgtggg
gatatttataccttggaagaagagcttcccaagagagtcaagtctcgcctgtccctcagc
actggggcccctcaggaagatgtattttcgggagatgaagtgagagcagccaagcgtccc
cggctggggaatccaagaaatcctgaagaatatggacaaaccccagattacttggccttt
atggagagcctgttgcagacacagtaccagcctgggactcagagcaacatgttttaa

DBGET integrated database retrieval system