Parus major (Great Tit): 107215758
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Entry
107215758 CDS
T04864
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107215758 (TAF1C)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
107215758 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Adeno_L433K_22K
Motif
Other DBs
NCBI-GeneID:
107215758
NCBI-ProteinID:
XP_015507613
Ensembl:
ENSPMJG00000005334
LinkDB
All DBs
Position
Z:8901479..8906074
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AA seq
933 aa
AA seq
DB search
MEFPAALFPSYFGVGPPREEGGSAPVAGWGEHGQVLEGGPGRRQVQPAFVPRRGVTGERW
EAADPAAVPVLLPSEDGWIPSPAPQDILYSSGLCKKLRAGKSGATLDFAKQLGHFFVDHP
EDAFGSLGHLLHKNFYLGNSKLKRPARSSTIRMTALVEDIDRLEARRGCPRQHLASRLRW
FSHLCRDWLFEVPLGLLADCLHEELMQQWSNLLFDDSLTGGALAWLPPEDGGTPVGRLVH
PGGKAMNHLYFQDVVLEELPRARGSPAQFELSGRIRQVAAARVDGQDFVGVRSDYHCGVW
RVPGKAGAAPTPLQVIHTDVPASCLTVSPHLPGELSVCTQSGTVYLWSVETGLQQLRHDP
QTMFFRDHSSWRWSDFTAHPRVLSCADRTGLQCLDARAPKRCHFDLFKVGEEAGCQQGER
VVLPMYLGRAHPSQYLVTTQFSMYVLDERLPLMPVLKWAHMMKAPPVFAHLMPGKPGRSH
KVLLGASHTQELLLLQYRGGSQSACQLAGTPQKLHSIAGCLQHLPTQLPHRHHMLQQRLT
APAAGLAATLEEDALHKSMLVFQLSEAGDVFCQRLTHKPAQPPAPPSRDEVTTAPGSSPL
FEAPASCPQVLGGEEEEEEEQTFYLSNLEVIIDDEEEDMGTPAPLEEAELQEPCANSQPS
PEVPSPAAALQYRRWLRALSRACREPPQHSWPPSLSQRRLFTRRDLEGPAGPSSLQRQMR
QQLRQTMQEGGRIRCWEPLALQPSPQPQTLESADGLDPLSVRLTAAWAGDWEQWWEERTS
FSMAQRQRALRERRRRQKRARGHRSLSASFTSSLTYQSELSELSDTGLPLLSPGRPHILS
QEGSPRASSPPLHSPPASPVPDEALLSSQSLRCRGIPKERRKTLRDYLSVWAEGPPEPPE
PPGSQASQLCIPSSQSQLSSASQPLRKRPRMGF
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccggccgcgctcttcccctcctacttcggcgtcggcccgccgcgggaagag
ggtggctccgcgccggtcgccggctggggcgagcacgggcaggtgctggagggtggcccc
ggccgccgccaggtgcagccggcgttcgtgccccgccgcggcgtgacgggtgaaaggtgg
gaggccgccgaccctgcggccgtgccggtgctcctgcccagcgaggacggctggatcccc
tcgcccgcgcctcaggacattttgtacagcagcggcctgtgcaagaagctccgggcaggc
aagtccggagccactctagacttcgccaagcagctgggacatttctttgtggatcaccca
gaagacgcttttggctccctggggcacctgctgcacaagaacttctacctgggaaactcc
aagctgaagaggccagcccgcagtagcaccatccggatgacagccctggtggaggacatc
gaccgcctggaggctcgacgcggctgcccccggcagcacttggcctcccgcctgcgctgg
ttctcccacctctgccgtgactggctcttcgaggtgccactggggctgttggcagactgc
ctgcacgaggagctgatgcagcagtggtccaacttgctctttgacgacagtctcactgga
ggggcactggcctggttgccccctgaagatggggggacacccgtgggccgcctggtgcac
cctggagggaaggccatgaaccacctctatttccaggatgtggtgctggaggagctgccc
cgtgcccggggctccccagcacagtttgagctcagtgggcgcatccggcaagtggctgca
gcccgtgtggatggacaagattttgttggcgtccgttcagactatcactgtggtgtttgg
agggtgccaggcaaggcaggggcagctcccaccccactacaggtgatccacactgatgtg
cctgcctcctgcctcactgtcagccctcaccttcccggggagctgtctgtctgcacccag
agcgggaccgtctacctctggagcgttgagaccgggctgcagcagctccgccatgacccc
cagaccatgttttttcgggaccattcatcctggcgctggagtgacttcactgcccaccca
cgggtgctcagctgtgctgaccgcacgggcctgcagtgcctggatgcccgggcccccaag
agatgccactttgacttgttcaaggtgggcgaggaagctggctgccagcagggtgaacgt
gtggtgctgcccatgtacctgggcagggctcacccctcacagtaccttgtcaccacccag
ttctccatgtatgtgctggacgagcggttgccactgatgcccgttctgaagtgggcacac
atgatgaaggcccctccagtctttgcacacctgatgccaggcaaacctgggaggagccac
aaggtgctgcttggagcatcccacacccaggagctgttgctgttgcaataccgggggggc
agccagtcagcatgtcagctggctgggactccacagaagctgcacagtatcgcagggtgc
ctgcagcatctgcccacccagctccctcaccgccaccacatgctccagcagcgcctcaca
gccccagcagcagggctggctgccacactggaagaggatgcactgcacaagtccatgttg
gttttccagctctctgaggctggggatgtcttctgccagaggctgacccacaagccagca
cagccccctgcacccccatcaagggatgaggtcacaacagcccctggctcttcccctcta
tttgaggctccagccagctgcccacaggtcttgggcggtgaggaagaagaggaggaagag
caaacattctatttgtccaacctggaggtgattatcgatgatgaggaagaggacatgggc
acaccagcacccctggaggaagctgaactgcaggagccctgtgccaactcccagccctcc
ccagaggtacccagcccagctgcagccctgcagtaccgacgctggctgagggcactttcc
agggcctgcagggagcctccccagcacagctggccccccagcctcagccagaggcgcctc
ttcacccgcagagatctggaggggccagcaggccccagcagcttgcagagacagatgcgc
cagcagctgcgccaaaccatgcaggaaggtggccgcatccggtgctgggagcctttggcc
ctccagccctctccccagccacagaccctggagtcagcagatggtctggaccccctaagt
gtccgtttgacagcagcttgggctggggactgggagcagtggtgggaggagaggacaagc
ttcagtatggcgcagagacagcgggctctgcgggagcggcggcggcggcagaagcgagcc
cggggccaccgcagcctttcagccagcttcacctcctccctcacctaccagtctgagctg
tctgagctgagtgatacgggcctcccactgctctcccctggccgcccacacattctctcc
caggagggctccccacgagccagcagccccccacttcacagccccccggcctcaccagtg
cccgatgaagccctgctgtcttcacagagcctgcgttgccgtggcatccctaaggagcgg
cggaaaacactgcgggactacctgtctgtgtgggccgaggggccacctgagccaccagag
ccccctggtagccaggccagccagctgtgcatcccttcttcgcaaagccagctgtcctcc
gcctcacagcccctccgcaagcgcccacgaatggggttctga
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