Parus major (Great Tit): 107216008
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Entry
107216008 CDS
T04864
Symbol
DENND4C
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107216008 (DENND4C)
Membrane trafficking [BR:
pmaj04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
107216008 (DENND4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
107216008
NCBI-ProteinID:
XP_015507914
Ensembl:
ENSPMJG00000017699
LinkDB
All DBs
Position
Z:32698156..32770333
Genome browser
AA seq
1953 aa
AA seq
DB search
MIEDKGPRVADYFVVAGLTDTDTATLLDQEISRHETKSTGPKAPITDIAVIIKSAGETVP
EGYTCIEATPTALQANLNYGSLKSPELFLCYKRGRDKPPLTDIGVLYEGKERIISGCEVI
QATPYGRCANVNNSSASSQRIFITYRRAPPVRPQNSLAVTDICVIVTSKGETPPHTFCKV
DKNLNCGMWGSSVYLCYKKSVPASNSLAYKAGLIFRYPQENYESFPLSDSVPLFCLPMGA
TIECWDPQTKYPLPVFSTFVLTCSSAEKVYGAAIQFYEPYPRELLTEKQQSQLGLLTTVE
RKVITSKSINSNKCICLLSHWPFFEAFRKFLMFIYKLSVSGPHPLPIEKHISHFMHNIPF
PSPQRPRILVQLSAHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLFVLLEGKI
LLHSLRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLATVLSAPLPFIVGVDSRYFDLY
DPPQDIVCIDLDTNMVYISDDKKNISWKQFPKKPCKNLLSTLKKLHPQLAAVHRKTQEGS
AVEMTPIEADFSWQKKMIDLEMEIQEAFLRFMASILKGYRTFLKPITQAPSNKATAADSL
FDHQGFLKSRDRAYTKFYTHLTKTQIFSRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGT
EKGEKVDVDSVEDARLIELDESQKSEHTVFIMPPEPPADDGQDRVPKYSYKNFPRLDFKL
FDRPQELKLSFSRHPAGSSISNSPALMAKRTKQEIKTAHKLAKKYYVSPSQWAKCLFSHS
YSLWFICLPAYVRVAHPKVKALQQAYDVLIKMRKTDVEPLDEVCYRVVMQLCGLWGQPVQ
AVRVLFEMKNAGIQPNAITYGYYNKAVLESSWPSSNRSGIFLWTKVRNVVHGTAQFRQCL
KKSTQSPPVPVIPALRSPTGGSDGDMVSHGSVDSSNDANSGEHTLFVSDLVRLDSVDNHS
STGGQSDQSYRPKDELLRDCVDSLPITETQVEKDTSSNIEDLIEEISTEKSYEKQQLNIE
ILSLADPPACGNSIVKVPSGIFDSSGRKSSDETVSSPLFITQDSIEDTVFGNVSPKKTSE
KRQKRQKLFSERSCSFSSESRAGMLLKKGSLDLHSKEIAIMMGADAKILTAALSGAKTSP
SHMSKFHSFENSTDQQVSDISGTWSAVTESDWDLEHRSSPVLEEPGEGQEHLENGRDGNM
TTAEDMNLEQSAESKIQIPESKDATAKRNSFYGVVKPIEREDVAVGLDPLSLLATDSTQP
GYPEPEEKLMSPVAARNLADEIESYMNLKSPLGSKFPSMELHKTDKEAEASSILGHSQER
RSSLPLDPILPSSKHYENRRSPSVSRSKTFTGRSKQQTHPQVQKERSSSLTGLGRSSPHG
SLGTVVTTLSNLKLDNILSGPKMDVLKSGMKQAANVASKMWGVVTSAYSYSDDEEESHRP
DFNFPVGFDDNILGDNLSSRTGVSGLLKNELTQSTTSLGSSSSGGDVGRQHYSAGEVSFP
KSMKVLDSEKSEHSSSHNTSLSSIFQNYAMEVLMSSCSQCRACDALVYDEEIMAGWTADD
SNLNTTCPFCKSTFLPLLNVEFKDLRGSASFFLKQSTSGDSLQSGTLPLNTDPLEQKLLT
SPAVADLISFSDHLQSSHTIAEETSSAAEKGDLAEEQTTDPTAMKTHDNNPPKRGVSLTR
SHSVGGPLQNIDLSQRPSHGISTVSLPNSLQEAVDPLIKQPNPAPVSVPYLSPLVLHKEL
ESLLENEGEQVIHTSKFINQHPIIFWNLVWYFQRLDLPSNLPGLILTSEHCNEGVQLPLT
SLAQDSKLVYIHLLWDNINLHQEPGEPLYISWRNLNSSEKKPSTLAEDQQATNTLLENIK
LSIQHNDVIKPINLLLQKVKPDVKRQRSFYREILFLSLVSLGRENIDMEVFDSEYRLALK
KLPKEVLEKMQRIDVPPSSRVECCRKCFGAPLI
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggtccacgagtggctgactatttcgtagtggcagggctcactgat
acagacacggcaaccctcctggaccaagaaatcagccgacatgaaactaagtcaactggt
cccaaggctccaattactgacattgctgtgataattaaatcagctggtgaaactgtccca
gagggatatacctgtattgaggccacccctacagccctccaagccaacttaaactatgga
agtctaaaaagtcctgaactatttctttgctacaagagaggccgggacaaaccacccctt
actgacattggagttctctatgaagggaaggagcgcataatttcgggctgtgaggtgatt
caagccactccgtatggtcgttgcgctaatgttaacaacagctcggcgtcttcgcaacgc
atcttcatcacctacagaagggcccctccagtgcgacctcagaactcgctggcagtgaca
gatatctgtgttattgttaccagcaaaggggaaacccctcctcacactttctgtaaagtg
gataagaatttaaattgtggtatgtggggttccagtgtatacctttgttacaagaagtct
gtgccagcttctaactctttagcgtataaagctggcttaattttcagatatcctcaagag
aactatgaatcatttccactgtcagattctgtacccctcttctgccttcctatgggagct
actattgagtgctgggaccctcaaaccaaatatccactaccagtgttctcaacatttgta
ctgacctgctcttctgcagaaaaggtttatggtgctgctatccagttttatgaaccttat
ccccgggagctgctaacagaaaaacagcaatcacagctgggtcttctgacgactgtagag
agaaaagtgattacttccaagtccatcaattcaaacaaatgcatctgtcttctctcacac
tggcctttctttgaagcatttcgaaaatttcttatgttcatctacaaactctctgtctct
ggacctcatcctcttcccattgaaaagcatatatcccattttatgcacaatatacctttc
ccttccccacaaaggccaaggattcttgtgcagctttctgcccatgatgcattaatattg
tcacagccagtttctacaccattgccattaagtggagcaaactttagcactctgctcatg
aatcttggaccagaaaactgtgccactctgttactctttgtattactagaaggcaagatc
ctcctccattcgcttagaccagctgtgttgacaggagttgctgaagctgtagtagctatg
atatttccatttcagtggcaatgtccatatatccccctctgtcctttgtctctggccacc
gtactcagtgcacctcttccatttattgttggagttgattcacgatactttgatctgtac
gatccaccacaggatattgtgtgcattgacttagacacaaacatggtctacatatcagat
gataagaagaacatcagctggaagcagtttcctaaaaagccatgtaaaaaccttctcagc
accttaaagaaactgcacccacagctggcagcagttcacaggaaaactcaagaaggctct
gcagtggaaatgactccaatagaggcagatttctcctggcagaagaagatgatagacctt
gagatggagatccaggaagcatttctccgtttcatggcatctattttgaagggttacaga
acattcctcaaaccaatcacacaggcaccttcaaataaagcaactgctgctgattccttg
tttgatcatcaaggatttttaaaaagcagagaccgtgcctatacgaagttctacacgcat
ctcaccaaaacacagatattcagccgctttattgaagagtgcagttttgtgagtgacaag
gatactggcttggcattttttgatgactgcatagaaaagctctttccagataagggaaca
gaaaaaggagagaaggttgatgtagattctgttgaagatgcacgcttgattgagcttgat
gagtcacaaaaaagtgaacacacagtgtttataatgccaccagaaccacctgctgatgat
ggacaggaccgagtgccaaaatacagctataaaaacttcccgcgactagatttcaagctc
tttgataggccacaggagctcaagctctccttcagcagacacccagctggaagcagcatt
tcaaatagtccagcactcatggcaaagaggacaaaacaggagataaaaacagcccataaa
ttagccaagaagtattatgtaagcccctcccagtgggctaagtgtctcttcagtcacagt
tatagcctatggtttatttgtctgccagcctatgtcagagttgcacatcccaaggtcaaa
gcactgcaacaggcatatgatgttctgattaaaatgaggaaaactgatgtggaaccgcta
gatgaggtctgttacagagtagtaatgcagctctgtggactgtggggtcagcctgttcag
gctgtgagagtcctttttgaaatgaaaaatgctggaatacagccaaatgccatcacctat
ggttattacaataaggcggttttagagtcttcttggcctagcagtaaccgcagtggcata
ttcctgtggacaaaggtacgaaacgtagttcatggcacagcacagttcaggcagtgctta
aagaaatcaacgcaaagcccaccagtgcctgtgataccagctctgcggagtcccacgggt
ggaagtgatggggacatggtgagccatggtagcgtggatagttctaatgatgctaacagt
ggggagcacaccctcttcgtcagtgacttagtcaggcttgattccgttgataatcactct
agcacaggtggtcagtcagaccagagttacagacccaaggatgagcttttgagagattgt
gtggatagtcttcctataactgaaacccaagtagagaaagatacttcttctaacattgaa
gacttaatagaagagatttctacagaaaaatcttatgaaaagcaacagctgaatatagaa
attctgagccttgctgatccacctgcttgtggtaacagtattgtgaaagttccatcaggc
atttttgatagcagtggaaggaagagcagtgatgaaactgtttctagcccactgttcata
actcaggattcaatcgaagacacagtctttggtaatgtttctcctaagaaaacaagtgaa
aaaagacagaagaggcaaaaactgttttctgagagaagctgcagtttcagcagtgaaagc
agagctggaatgctgctgaaaaaaggcagcttggacttgcattctaaagaaatagcaata
atgatgggagcagatgccaagatcctaacagcagctttatctggggccaaaacttcaccc
tctcatatgagtaaattccacagctttgaaaacagcactgaccagcaggtttctgacata
agtggcacctggagtgcagtgactgagagcgattgggacctagaacataggtcttcacca
gtgctggaagaacctggggaaggacaggagcatcttgagaatggaagagatggaaacatg
accacagcggaagacatgaatcttgaacagtcagctgagtctaaaatccagataccagaa
tccaaagatgcaactgctaaaagaaatagcttttatggagtggttaagcctattgaaagg
gaagatgttgcagtaggcttggaccctctgtctttgctagctactgacagcacacaacca
ggttatccagaacctgaggaaaagttaatgtcaccagttgcagcacgtaatttggcagat
gaaatagagagctatatgaacttgaagagcccattgggtagtaagtttcccagcatggaa
ctgcacaagacggataaagaagcagaagcttctagtatacttggtcactcccaagaaagg
aggtcaagcctgcctttggatcccatcctgccgtcctccaaacattacgaaaatcgaaga
agtccttctgtctccagatccaaaacgttcactggacgatcaaagcaacaaactcatcca
caagttcaaaaggagcggtcttcatctttgacaggactgggtcgttcttctccacatggc
tcactgggaactgttgtaacaactttatccaatctgaagttagacaatatactgtctgga
ccaaaaatggatgttttgaaatcaggcatgaagcaagctgccaatgtagccagtaagatg
tggggagttgtaacatcagcatatagttactcagatgatgaggaagaaagccatcgacca
gactttaacttccctgttggctttgacgataatattttaggagataatctgtcatcaaga
actggagtctcaggcctacttaaaaatgagctcacacaaagcactactagtcttggcagt
agcagcagtggtggtgatgtaggaagacagcattacagtgcaggtgaagtttcattccca
aaaagtatgaaagttctagattctgagaaatcagagcacagttcttcacataatactagt
ttatccagcattttccagaactatgcaatggaggtcttgatgtcaagctgctctcaatgt
agagcttgtgatgctttggtttatgatgaagaaatcatggctgggtggacagcagatgac
tcgaacttgaacaccacctgccctttctgtaaaagtaccttcctacctttgcttaatgtt
gaatttaaagaccttcgtggctctgcaagctttttcctgaagcaaagtacctcaggagat
agtttacagagtggcacccttccattaaacacagatcctctggagcagaaactgttgacc
agtccagctgttgctgatttgatcagtttttcagatcacctgcagtccagccacaccata
gctgaagaaaccagctctgcagctgagaagggggatttggcagaagaacagactacagat
cccacagccatgaagacacatgacaataatccaccaaaaaggggagtgtctttgactcgg
agccacagtgtgggaggtccactgcaaaacattgatctctcccagagaccatctcatggc
atttcaacagttagtcttccaaatagtttacaggaagctgtggatcctttaataaaacaa
cctaaccctgcccctgtatctgtgccctatttgagccctttggttctgcacaaggagctt
gaatcactgttggagaatgagggagagcaagtaattcatacatccaaattcatcaatcaa
caccccataatcttctggaacttagtctggtatttccaacggttggatctgcccagcaac
ttacctggactcattctaacatctgaacactgcaatgagggagtgcagcttcctttgaca
tcccttgctcaagatagcaagctagtatacatccatcttctatgggacaatatcaacctc
caccaagagccaggggagcccctatatatatcttggagaaatctcaattcttctgaaaag
aaaccctccacactggcagaagatcagcaggcaacaaacactttgttagagaacatcaaa
ctaagtattcaacacaatgatgttattaagccaatcaacctcctcctgcagaaagttaaa
ccagatgtgaaacgacagaggagtttttacagggaaattcttttcctgtctctggtgtct
cttggaagagaaaacattgacatggaggtctttgatagcgaatacagacttgcacttaag
aaactaccaaaggaagttcttgaaaagatgcagagaatagatgttccaccaagcagcagg
gttgagtgttgcaggaagtgctttggagcacctttaatataa
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integrated database retrieval system
