Parus major (Great Tit): 107216038
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Entry
107216038 CDS
T04864
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj02010
ABC transporters
pmaj04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107216038 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
107216038 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmaj02000
]
107216038 (ABCA1)
Transporters [BR:
pmaj02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107216038 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
107216038
NCBI-ProteinID:
XP_015507961
Ensembl:
ENSPMJG00000003258
LinkDB
All DBs
Position
Z:42804270..42896419
Genome browser
AA seq
2262 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDARRLLLYSQQDT
SIKDVQKVLGKLRKLGNSSGLDLKLRDFLTDNETFSDFLHHNVSMPSSAVEELLDAGVNL
QQVLVSGYRMRLRNLCNSSTSSEFLTIQNQTAAKDSEAFICTLSKEKLHAAEQAFRANLN
PLKPLQRHLSFNSSLWDLSETVEVLRESFGKLVKELLSMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKSKALWDPHLPASNWTVEDVARFLSNSPEEFETENA
SVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVPTEVRLINKSLELLDERRFWAGIVFT
EIAPDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLILKMGNLLPYSDPSVVF
IFLTIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHRHPDQKGSSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMATDV
GLPHKLKARTSRLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLTQQQFMALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFISNDAPEDAGTHKLLDALLDKPGFGTRCMQGHSIPDTPCTVGQKEWVTA
SVPESVLDIFLKGNWSMENPSPSCECSSEKIKKMLPVCPPGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKQVK
KILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQ
QGENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLKDI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHSKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctgggattgctgctatggaagaactttacctacagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtcactttccaaataaagct
atgccttcagcaggaaccttgccgtggatacaggggatcatctgcaatgccaacaaccca
tgtttccgctacccaactcctggggaatcccctggaattgttggaaacttcaatgcctcc
attgtttcccgcctgttctcggatgccaggaggttactgttgtacagccaacaggatacg
agtataaaggatgtccagaaggtcctgggaaaactacgcaaattgggaaattcctctggc
ttagacttgaaacttcgggatttcctgactgacaatgagacgttctctgacttcctccat
cataatgtgtccatgccatcatctgcagtagaggagctactggatgcaggggtaaatctc
cagcaggtccttgtgtctggttatcgaatgcgcctgcgaaatctctgcaatagctcgaca
tcgtctgaatttctcacgatccaaaatcagacagcagccaaggactctgaggccttcatt
tgcaccttgtcaaaggaaaaactccatgcagctgagcaagcctttcgtgctaacctgaat
cctttgaagcctcttcagagacacctttctttcaattcttccttgtgggatctgtcagaa
actgtggaagttttgagagagagctttgggaagcttgttaaagagctgctgagtatgaag
agctggagtgacatgaggcaagaggtgatgttcctgaccaatgtgaatgcctcaaactcc
tctacgcagatctatcaggctgtgtcacgcatcgtgtgcggccatcctgaaggtggaggg
ctcaaaattaaatccctcaactggtatgaagataacaattacaaagcactgtttggaggg
aacagcactgaagatgatgtgattaacttctatgataactccacaacaccctactgcaat
gagctcatgaagaacctggaatctagcccgctttccaggattatctggagggcattgaaa
cccttgctcattgggaagatcttgtacactccagatacaccagctgtaaggaaggtcatg
tctgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcgggggaatgtgg
gaggagataagcccaaaaatttggacatttatggaaagtagtcaggaaatggatctcatt
cggacgttgctgaaaagcaaagccctctgggacccgcacttgccagcttccaactggaca
gtggaggatgttgcccgtttcctgtcaaacagtccagaggaatttgagacagaaaatgcc
tctgtgtacacctgggtggatgccttcaatgagacagaccgggctatccaaaccatctcc
cgcttcatggagtgtgtcaacttggacaaactggagcctgtgcccacagaagtccggctc
attaacaagtcattggagcttctggatgaaaggaggttctgggctggcatagtcttcact
gaaatagctcctgacagcacagaccttcctcaacatgtgaaatacaagatacgcatggac
attgataatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgaccccttcgaggacatgcgctatgtctggggaggctttgtctatctgcaggatgtg
gtagagcaagccatcatcagggttcagacaggcacggagaagaagacaggagtttatgtg
cagcagatgccctacccatgttacgtggatgacatatttctgcgcgtcatgagccgctcc
atgcctctcttcatgacactagcttggatctactcagtggctgtgataattaagggcatt
gtgtatgagaaggaagcccggctgaaagaaacaatgaggattatgggacttgacaatggc
atcctttggttaagctggttcattagcagccttgtccctctcctgatgagtgcaggattg
ctggtgctgatcctgaagatggggaatctgctgccttacagcgatcctagcgtggtgttc
attttcctcacaatcttcggtgttgtgactatcctccagtgctttctcatcagcaccgtg
ttctccagggccaacctggcagctgcctgtgggggcattgtctacttcacactgtacctg
ccttatgtactgtgtgttgcctggcaggaccacatcagcttctcactcaagatttttgcg
agcctgctgtctccagtagcctttggtttcggttgcgagtactttgcactgtttgaggag
cagggagttggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcaccacatcagccgtcatgatgctgtttgataccttcctgtatggagtcatgacc
tggtacattgaatctgtcttcccaggccagtatgggattcccagaccctggtactttcct
ttcacaaagtcctattggtttggggaggaaccacaggacaggcagcaccgccatcctgac
caaaagggatcttcagaagtctgcaaggaagaagagccagtgcatctgagtcttggtgtt
tccatccagaacctggtcaaggtttaccgtgatggcaagaaagttgctgtagatggtctc
acacttaacttctatgaaggacagatcacctcctttctgggacataatggagcagggaaa
accactaccatgtccattttgactggcttgttccccccaacctcaggtacagccttcatc
ctgggcaaagatatccgctctgagcttagcaccatcaggcagaacctgggtgtatgtccc
caacacaatgtgctgtttgacttgctgactgtggaggaacacatctggttctatgctcgg
ctcaaagggctgccggagaagaaggtgaaagaggagatggagcagatggcaacagatgtt
ggtttgcctcacaaactgaaagctaggacaagcaggctctctggtggcatgcagaggaag
ctctcagttgccttagcatttgtcggtggctccaaggttgtcattctggatgagcctaca
gctggggtagatccttattctcgcagaggaatatgggaactgcttctgaagtatcggcag
ggtcgcactatcattctctccacgcaccacatggatgaggcagacattctgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaac
cagctgggaacaggttattatttgaccctggtcaaaaaggatgtggattcctctctgagc
tcctgccgaaacagcagcagcacagtttcctatctgaaaaaggatgacagtgtctcccag
agcagctctgatgctggccttggcagtgaccatgaaagtgacacactgacaatagatgtc
tctgcaatttcaaatctcattacaaaacatgttcctgaggcaagactggtggaggacata
ggtcatgaattaacctatgtcttgccatacaaagctgctaaagagggagcttttgtggag
ctgttccatgaaattgatgaccgtctttctgatcttgggatttccagctatggcatctct
gaaactactctggaggagatcttcctgaaagtggctgatgatagtggtgtggatgcagaa
acctcagatggtacactgccagccagaaggaacagacgtgtgtttggagacagacagagc
tgccttcgtccatttacagaagatgatgcatttgatcctaatgactcggacatagatcca
gcagaatccagagagacagaccttctcagtggcatggatgggaaaggctcctaccagatg
aaaggctggaagctcactcagcagcagttcatggctctgctgtggaagaggatgctcatt
gccaagagaagccggaagggcttttttgcccagattgtgctgccagctgtctttgtgtgt
attgctctcatgttcagcctgattgttcctccttttgggaaatatcccagcctggaatta
caaccctggatgtatgatgagcagtacacttttattagcaacgatgctccagaagatgca
ggcactcacaagctcttggatgcccttcttgataagccgggatttgggacacgctgtatg
cagggacattccatcccagacactccttgcactgtggggcagaaggaatgggtcactgct
tcagttccagagtcagtcctggacatcttcctgaaaggcaactggagcatggagaatcct
tccccatcttgtgagtgcagcagtgagaagatcaagaagatgctgcctgtgtgcccccct
ggtgcagggggcctgccacccccacagcgtgagcaagacacagctgacatcctccagaat
ctgacaggccgcaatatatcagactacctggtgaagacctacgcgcaaatcattgggaaa
agcttaaagaataaaatctgggtgaatgagttcagatatggtggcttttctttgggagct
agcagttccctcatgcttcctccaagccatgaagtcactgatgccattaagcaggtgaag
aaaattttggagctggcacagggaagttctggggatcggtttctcaacagcttatcaagt
ttcatgaaaggcctggatacaaagaacaatgtgaaggtgtggtttaacaacaagggctgg
catgccattgcatccttcctaaatgtgatcaacaatgccatccttcgggccaacctccaa
cagggtgaaaaccccagtgcttatggaatcactgccttcaatcacccactcaatctcacc
aagcagcagctctctgaagtagctctgatgaccacctctgtggatgtcctcgtgtccatc
tgtgtgatctttgccatgtcctttgttcctgccagctttgtggttttccttattcaggag
cgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgtgatctattgg
ctggccaactttgtgtgggatatgtgcaactacattgttccagccacactagttgtcatc
atcttcatctgcttccaacagaagtcctatgtatcctcctccaacttgcctgtgctggct
ctccttctctttctctatggatggtccatcacccctctcatgtatccggcctcctttgtg
ttcaaaatccctagcacggcgtatgttgtgctgaccagtgtgaacctcttcattggcatc
aatggaagtgtggccacctttgtcctggagctcttcaccaacaataagctgaaggacatc
aatgacatcctgaagtctgtctttctcatcttcccccacttctgcctgggccggggactc
attgacatggtgaaaaaccaggctatggctgatgctttggagagatttggagaaaatcgt
tttgtgtcccctctgtcatgggacctggtgggaagaaacctctttgccatggcagtagaa
ggcgttgtgtttttcctcattacagtgctcatccagtacaggttcttcatcaaacccagg
cctgtctatgccaagctgcctcctgtgaatgatgaggatgaggatgtaaccagagagagg
cagaggataattagtggaggaggacagagtgatattttggaaatcaaggagctaaccaag
atttacagaatgaagagaaagccagcagttgataggatctgtgttggaatcccccccgga
gagtgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgtta
actggtgatacagatgtgacgggaggagaagctttcctcaaaggaaacagtatcttgtcc
aacatccaagaagtccatcagaacatgggctactgcccacagttcgatgctgttaatgaa
ctgctaacagggcgagagcacttggagttctttgcactcctgagaggtgttccagagaaa
gaagtctgcaaggttggcgagtgggcaattcggaaactgggcctcgtgaaatatggagaa
aaatacgctgggaattacagtggagggaacagacgcaagctttccacagccattgccctc
attggagggccacctgtggtgttcctggatgagccaacaacagggatggatcccaaagca
cgccgcttcttgtggaactgtgctctgagtgtaatcaaggaggggagatcagtggtgctc
acgtctcacagcatggaagaatgcgaagccctgtgcactcgaatggcgataatggtcaat
gggcggttcaggtgtctgggcagtgtccagcacctaaagaacaggtttggagatggctac
accatagtggtgagaatcgcaggagcaaacccagacctgaagcctgttgaagagttcttt
gggcatgctttccctggaagtgtcctaaaggaaaaacatcggaatatgctgcagtaccaa
cttccctcttcaccatcctccctggccaaaatattcagtattctctcccagaacaaaaag
agactccacatagaagactactccgtttctcagaccacacttgaccaagtttttgtaaat
tttgctaaggaccaaagtgacgacgaccattctaaggacctgtcattgcacaaaaaccag
actgtggtagacattgcaatccttaactccttcctgcaagatgagaaggtaaaagaaagt
tgtgtgtga
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integrated database retrieval system
