Parus major (Great Tit): 107216086
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Entry
107216086 CDS
T04864
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107216086 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmaj03021
]
107216086 (SMARCA2)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107216086 (SMARCA2)
Transcription machinery [BR:
pmaj03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107216086 (SMARCA2)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
107216086 (SMARCA2)
Chromatin remodeling factors
BAF complex
107216086 (SMARCA2)
PBAF complex
107216086 (SMARCA2)
GBAF(ncBAF) complex
107216086 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
107216086
NCBI-ProteinID:
XP_015508097
Ensembl:
ENSPMJG00000016196
LinkDB
All DBs
Position
Z:25962904..26084643
Genome browser
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPLSGGGPTPPQMTPSQPGPIIAGDPQAMNQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGAATGP
GSAPGMPGHTTAITPKTWTEGQAPDMSVSNAQQKLPAPAPSGRPSPAPAAAQPAATMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESSKLETDEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEEE
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQEENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagatcctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctgggacctagcccaggaccagggccgtctcctggctccgtt
cacagcatgatggggccaagtcctggtccacccagtgtcccacatccaatgccgacaatg
gggcctactgattatccacaggaaggcatgcatcaaatgcataagtctattgatggcttg
catgaaaaaggaatggttgaagatgttcactgtggctccatgaagagtatgcgacctccc
catcctggaatgggtccacctcagagtccaatggaccagcatagccaaggttacatgtct
ccacacccatctccactaggagcaccagagcatgtgtccagtccactgtctggaggaggt
ccaacaccacctcagatgactcccagtcagccagggcccattatagcaggagacccacaa
gctatgaatcagcctaacagagggccttcacctttcagccctgcacagctgcatcagctg
cgggctcagattctagcatacaaaatgctggctaggggtcagcccttaccagaaaacctc
cagcttgctgtccagggcaagagaaccctgcccggtattcaacagcagcagcctcccagt
gccttcaacagacagtctggtattggattacatgcgatgagtggtgctgcaactggacca
gggtctgcaccagggatgcctggacatacaactgccattacccctaaaacttggactgaa
ggccaagccccagatatgagtgtctccaatgcacaacaaaagcttccagcgccagctcct
agtgggaggccttctcctgctcctgctgctgcccagcctgctgccacaatgcctgggccc
tctgtaccacagcccccacctggacaaccttcacccattgtccagctgcagcaaaagcag
aaccgcatcagccctatccagaagccacaagggctggatcctgttgaaatacttcaagaa
cgtgaatatagacttcaggctcgaattgctcacagaattcaggaactagagaacttgcct
ggctctctcccccctgatctgcgaaccaaagctacagtggagttgaaggcacttaggcta
ctgaacttccaacgccagttaagacaagaggtggtagcctgcatgcgtcgtgacacaaca
ctcgagacagcattgaactccaaagcctacaaacgaagcaagcgccagactttgagagag
gctcgtatgacagaaaagcttgaaaaacagcagaagatagaacaggagaggaagcgtagg
cagaagcaccaggaatacctgaatagcatattgcagcatgctaaagattttaaagagtac
caccggtcagtcgctgggaaaattcagaaactttcaaaagctgtggcaacttggcatgcc
aacactgaacgtgagcagaaaaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggctgaagatgaagaaggctaccgtaagctgattgatcaaaagaaggacagacgc
ttggcttacctgttgcagcaaacagatgagtatgtggctaacttgactaacctggtatgg
gagcataaacaggcacaagcagccaaagagaagaagaagcgaaggagaagaaagaagaaa
gctgaagaaaatgcagaaggaatggcatctggtcttggtcctgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggaccagaagcacccaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccagatcagatagtgaagatgaaagtggctctgaatatgaggag
gaggatgaggaagaagaatcaagcaaattagaaacagatgagaagatactcctggatcct
aacagtgaggaagtttctgagaaagatgcaaagcaaatcattgagacagccaaacaagat
gtggatgatgaatatagcatgcaatatagtgctagagggtctcagtcctactacactgtt
gctcatgcaatcactgaaagggtggaaaagcagtcttcccttcttattaatggcacttta
aaacattatcagctccagggactggaatggatggtttctctctataataacaatctgaat
ggaattttagcagatgaaatgggactaggaaagacaatacagactattgctctcatcact
tacctaatggagcacaaaagactcaatggcccctatctcatcattgttcccttgtcgact
ttatccaattggacatatgaatttgacaaatgggctccttctgtggtgaagatatcttac
aagggtacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaac
gttcttttaactacttatgagtacataataaaggacaaacatatccttgctaagattcgg
tggaagtacatgatagtagatgagggccatagaatgaagaaccatcactgcaagctgact
caggtcttgaatactcactatgtggcccctcggcgaattctgctgactgggactcctttg
cagaacaaattgcctgaactttgggctcttctcaatttccttcttccaaccattttcaag
agctgcagcacctttgaacagtggttcaatgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgtcgtctccataaagtgcttcggccc
ttcttgctgagaagactgaagaaggaggttgagtctcagcttccagaaaaggtggaatat
gtgatcaaatgtgacatgtcagctcttcaaaagatcctgtatcgtcacatgcaagccaag
ggaatccttctcacagatggttctgaaaaagacaagaagggaaaaggtggagcaaaaact
cttatgaacactatcatgcaattgcgaaaaatatgcaatcacccctacatgttccagcac
attgaggagtccttcgctgaacacctgggctactcaaatggtgtcattaacggagctgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacgagct
actaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcatttcgcaatttcctttacctgcgtctcgatggcacaacaaaatcagaggat
cgagctgctctgttaaagaagttcaatgaacctgggtcacaatattttatcttcttgctg
agtacaagggctggagggctaggcttaaatctccaggctgctgacaccgttataatcttt
gacagtgactggaatcctcatcaggacttgcaggcccaggacagagctcaccgaattggt
cagcagaatgaagttagagtcctgcggctgtgcactgtgaacagtgtggaagagaagata
cttgctgcggcaaagtataagctgaatgtagatcaaaaagttattcaggcaggaatgttt
gatcagaaatcttcaagccatgaaaggagagcattcctacaagctatactggagcatgaa
gaagaaaatgaggaagaagatgaagttcctgatgatgagacactgaatcagatgattgct
cggcgtgaagaggaatttgatctttttatgcgcatggacatggatcgtcgcagggaggat
gccagaaaccctaagcgtaaacctcgcctgatggaggaggatgaattaccatcctggatt
attaaggatgatgctgaagttgaaaggcttacatgtgaagaggaggaagagaaaatattt
ggaagagggtcccgtcagcgcagggatgtggactacagtgatgctctcacagagaagcag
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaggtccggcttaaa
aagcgaaaaaggcgaagaaacgtggacaaggattctgggaaggaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagagaagttgtcgcccaatccacccaaactgaca
aaacaaatgaatgctatcattgatactgtgataaactacaaggatagttcaggacggcag
ctaagtgaagtcttcattcagctcccatctaggaaagaactaccggagtattatgaatta
attaggaaaccagtggacttcaaaaagataaaggaaagaattcgcaaccataaatatcgg
agtcttggggatttggaaaaagatgtcatgttgctgtgccacaatgcgcagacattcaac
ttggagggatctcagatctatgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagatagccaaagaagaagaaagtgaggatgaaagcaatgatgatgaagaagaa
gatgaagaagaagaatcggaatcagaatcaaaatcagtgaaagtcaaaatcaagttaaat
aagaaggatgaaaaaagtcgggagaaaggaaaaggcaagaagaggcaaagcagagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagaggaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
