Parus major (Great Tit): 107216119 Help Entry 107216119         CDS       T04864                                  Symbol DCHS1 Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism pmaj  Parus major (Great Tit) Brite KEGG Orthology (KO) [BR:pmaj00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:pmaj04515]     107216119 (DCHS1) Cell adhesion molecules [BR:pmaj04515]  Cadherins   Cadherin related    107216119 (DCHS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th RET_CLD1 PepSY Cadherin_4 CADH_Y-type_LIR Motif Other DBs NCBI-GeneID:  107216119 NCBI-ProteinID:  XP_033371334 Ensembl:  ENSPMJG00000005689 LinkDB All DBs Position 1:complement(431658..472539) Genome browser AA seq 3266 aa AA seqDB search MEQMKRSTVLLLELLILGGLRAGMGSAVLGTLDLQIDEEQPAGTIIGDISAGLPPETSAY MYFISAQEGSGVSTDLGIDENTGIIKTARVLDRETRDRYSFIAVTPEGITVEVNIQVNDI NDHAPAFPKQHSTFQIPEHTPIGSRFPLDPAFDADSGLLNTQGYMIKSGNVGQAFRLETR RGPNGVLYLDLVVSSVLDRENRSSYSLLLEAYDGGSPPRSTQMTLDVSIQDINDNAPSFN QSRYHTLISENLKPGSSILQVFASDADEGDNGDVIYEINRRQSDPEQYFTIDARTGVIKL NKGLDYEVRKVHELVVQARDRAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQIS EGAQPGQYVARISVSDPDYGEYSNVNVTLEGGDGKFALTTKDNIIYLICVDQLLDREERD SYDLRVTATDSGTPPLRAESAFVLQVMDVNDNPPLFDQQEYKQSIPEVVYPGSFVLQVTA RDKDQGPNGEVRYSILHGRDTHSSWFTIDPATGIITTAAPLDYEKDPQPQLTVLATDRGT PALSSSAVVHVALQDVNDNEPVFRSNFYNVSLKENTPVGTCFLQVTATDADSGAFGSLSY SIGSGIGSIVPTQFSIDKHSGQLCTVQPLDRDEGTSAYDFTITAVDGGGLNSMVYVKVFL EDMNDNRPVFYPLEYAASISTQSMPGTAVLRVTAHDKDEGLNGRVTYRIVLGNSPPLFSL NKDTGVISLSWSLSGKANTLVQLVISAQDGGGLQAQPNARVNISIVEGTVSPPVFEQAQY FFIVPEDMPQGASVGAVQAQNPPGHADDIFYSISSGDPHGYFSIDSASGQLRTSLPLDHE SQSVLILDVQARSGSPPAYSSTRVKISVSDVNDNVPAFPAPSDSILLPEATEPGTTVYSV QAEDRDSGANGQVTFELVSGGEGTFVVERASGAVRLLGALQYEAISAYSLAIVARDGGIP QLSSTFTLLVHVQAEDDNGPIFDTLTYRVEVQEGVPISTRFLQVRALAHDVESTALTYHL RADGDAASFGIVPESGWLYVKSALDRETRDLYVLTVLASVGGTGTAADARKTGTSTVRIS VTDENDNSPRLSEERYFFTVSENQAPGSSVGRVMASDRDAGQNSRLTYRLLQHDPNFLIH TQTGEVSTKHSLDREQQSSFQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPAFLHVGSG QELTVQVLEEKPSGLLVASLQAKDPDEGENGTIIYSLIGAWAERFTLHVATGELRTATVL RRTDRAEYIFTVTASDRGVVPRSTSAILRVQVLPSSRVLPRPDATVLTLHPLEGVKPGSV IGSVAPPDAPVRGQLIYTVVGGGGDGTFVVDSMTGEIYAARELDYEAGARHVLQVSAEDT QHGYPSSRLVLVQIHVQDCNDQAPTFPEDPITIVVPENAQAGSSIFTFQALDGDGVGPNS QVRYALLHLEPPGAPFQLDSRSGQLTLRQGLDREAAASFLLVVEATDQARNVSQRRSTAV TARVFVTDENDNVPVFLSPATVSVMEDQPTGFVALHVVAQDSDLGENGRVSYSLRAGNGD GRFHLNPSTGALSIVRALNREEVAQHNLTVVATDHGFPRLSTTQLLSVLVLDVNDEAPAF EKPEYEAHIMENLPAGSPVLQVLATDRDLGANGQVSYGGLSGGPFSIHPQTGLIVTTRPL DREEQEQHVLTVYARDAGLPPSLTKATVWITVGDENDHAPHLESESCSVEVPENQSRVAL YTLRATDPDGGENGRLEYRLAGGDPGQDFSLDPVSGVLSTAHALDREQIASYSLIVVVQD HGSPPRSATMSVTVQVLDLNDNAPSFAQASYTVEVPEDLPVGALVLQLVAEDPDEGTNGQ VSYYLGNESLGMFQVEPQSGCIRSAQALDRERQPTYSFLAKAVDSAPWEPKSTAVRVTVV VRDVNDHVPAFLHSPLTVNLSRHTPLKQVVATMRAEDRDAGANASILYRFATPSSAFAIN SYTGDIQLLQPLGSLSQRQRTLFVLAMDLGQPALSSTGVVVIHVQEEPYRGLRFPRSTSD VALAENAAPGTAVASVQAMHMGGSSGHITYSIISGNERNTFLIQPSSGAISVQDSSSLDF EASPRLRLVIQAETAASFGFMAINLNLQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVL ADDLDQGVNGQVTYAINQSLPMPGLYHIDPQTGTITTAAILDREIWSQTRLVVTAMDRGT PPLMGSATLTVVVMDINDNSPTIPVPWEIRVPENTLLGTQIAQLTGNDVDSGPSLSYTLL LEGDEADTFGVLRYGGHIALTGPLDHEQRSRYTLTLRASDTRHETEANLTVLVEDVNDNV PTFTQVFYQVLLPEHTPAGSVILTVSATDPDSGSNGDITFHLAVPSPDVAIDPSNGTIFT TRQVEFNASQPTLDLVVEARDHGSPSLSSWATVQLQVLDVNDHSPRFQEPCYNASVPEDL RPGTTVLTLEAGDADLSRENAGFDYTIVSGNSGNAFQVESRVAWAGGQLRTQGALVLVES LDFEAIPVYNLTVAASDRGLPQRSATVPVLISVQDVNDNPPVFTRAEYRAAVSEATLPGT ELLRVAAHDADSGPRGRVHYTISSGDQQGLFQLHESTGALSLVHPLDREAQALHTLVVRA TDTPGGHFALVPVAIEVKDINDNKPYFPVEVLSASIRENLPPGTLVTTLRAVDADTGAFG ELRYVVLEQAVGDPTTGDGRDAFAVNGSSGELRSRLTFDYERAKAFQLLVQATDAGNASA TVTVQVLVTGEDEYDPIFLSPSFNFEVPEGARKGQTIGRVLATDEDEGADGVVLYTLAKP SPYFAINQTTGSIYLRVDSQPQAGAGRAKREPREISLEVQARSPLPASRVASAQVTIDVT HTSFGLAPDLNLLLVAVAASLGVVVVLAAVAIVLALVRSRQRQGHKKAEGEGALARAQSG SLQKLGREEPALPGAEHIYHQALPGYGTEPAGPYTRGGSLDPSHSSGRGSAEAAEDDEIR MINEYPRVASITASMQEHIAARGPDSGIQQDADQLSDISCEPAALESAQWFKSKKGSGLL LPGPSLQLYREDGGGSAFLGVRCGLSVSSQPQDYAFPEDGKPSVEGSLTAIVASDEELRG SYNWDYLLNWCPQFQPLASVFTEIARLKDESSLRKPFPAKPKAEPKPRIDPPPLITSVAH PGAKSVPPKPPPGRTFPHPSSLRRSPISHEGSISSSAMSPSFSPSLSPLATRSPVVSPFG ISQGPSTSTISAEHSLEPPEEAELRI NT seq 9801 nt NT seq  +upstreamnt  +downstreamnt atggagcaaatgaagaggtcaacagtgcttctgctggagctgctcattcttgggggcctg agagcagggatgggctctgctgtcctgggcaccctggatcttcaaatagatgaggagcag ccagctggcaccatcattggggacatcagtgctggcctaccccctgaaactagtgcctac atgtatttcatctcagcacaggagggcagcggtgtctccactgacttggggatagatgag aatactgggatcatcaaaacagctcgtgtcctggatcgggagactcgggaccgctacagc ttcattgctgtcaccccggagggcatcacggtagaagtgaacatccaagtgaatgacatc aatgaccatgccccagcatttcccaaacagcacagcacctttcagatcccagagcacaca cccattggcagcaggtttcccttggacccagcctttgatgctgacagtggcctcctgaac acgcaaggctatatgattaagagtgggaatgtggggcaggccttccgcctggaaacgcgc cgaggacccaatggggtcctgtatttggacctggtggtcagcagtgttctggatcgggag aaccgttcatcatactcgctgctgctggaagcctacgatggtggttctcctccccggagc acccagatgacactggatgtgtccattcaggacatcaacgacaacgcccccagcttcaac cagagccgctatcatacgctcatttcagagaatctgaaacctggcagcagcatcctgcag gtctttgcctctgacgcagacgaaggtgacaatggggatgtgatttatgagatcaaccga cggcagagcgatcctgagcagtacttcaccattgatgcccggactggagtcatcaagctc aacaagggtctggattatgaagtgaggaaggtgcatgagctggtggtgcaggcaagggat agggctgtccatcctgaagtcaccacggcctttgtcactatccatgtgcgtgactacaat gacaaccagcccactatgactatcatctttctgagtgaagatggctccccacagatctct gaaggagcccagcctggacagtatgtggcacggatttctgtttccgacccagactatggg gagtactccaatgtcaacgtcacactggagggaggagatggcaagtttgccctcactacc aaggacaacatcatctatctgatctgtgtggaccagcttctggatcgggaagaaagagac tcctacgatctgcgggtgacagctactgactcaggaacaccgccactccgggcagaatca gcctttgtgctgcaggtgatggatgtaaatgacaatcccccgctctttgaccagcaggag tacaagcagagcatccctgaggtggtgtacccaggcagctttgtcctgcaggtgacagct cgtgacaaggaccagggtcccaatggggaggtgcgatacagcattctgcatggccgtgac acccactccagctggtttaccattgaccctgccactggcatcatcaccactgctgcccca ctggattatgagaaggacccacagcctcagctcactgtgctggctacagaccggggaacc cctgccctgtcttcctcagctgtggtgcacgtggccttgcaggatgtcaacgacaatgaa ccagtgttcagaagtaacttctacaatgtgtccctgaaggagaacacccctgttgggacc tgcttcttgcaagtgacagccacagatgcggacagtggtgcatttggctccctttcctac tccattggctctggcatcggcagcattgtccccacacagttcagcattgacaagcactcg gggcagctgtgcacggtgcagcccctggaccgtgacgagggcacatctgcctacgacttc accatcactgctgtggatgggggcggcctgaactccatggtgtatgtgaaggtgttcctg gaggacatgaatgacaaccggccagtgttttacccgctggagtacgctgccagcatcagc acacagagcatgccagggacagctgtgctgcgtgtcaccgcccacgacaaggatgagggg ctgaatgggagagtgacgtaccgcatcgtcctgggaaactcgcccccgctcttctccctc aacaaggacacaggtgtcatctctttgtcatggtctctgagtggcaaagccaacaccctg gtgcagctggtgatctctgctcaggatggggggggcctgcaggcacagccgaatgcccgg gtgaacatcagcatcgtggagggcacagtctcaccccctgtcttcgaacaagctcagtat ttcttcattgtgcctgaggacatgccacagggtgccagcgtcggggctgtccaggcccag aacccaccgggtcatgctgatgacatcttctattccatctcctcgggggaccctcatggc tatttctccattgactcagcctcggggcagctccgcaccagcctgcctctggatcacgag tcccagtcagttctcatcctggatgtccaggcccggagcggttcaccccctgcctacagc agcacacgtgtgaagatctccgtatcagacgtgaatgataacgtgccagcattcccagct ccctccgactccatcttgctgccagaggccacagaacctgggactacagtctacagcgtg caggccgaggaccgtgacagtggtgccaatggacaggtgacctttgagctggtgtcaggg ggtgagggcacctttgtcgtggagcgtgcctcaggggcagtgcggctcctcggggccctg cagtacgaagccatctcagcctacagcctggccatcgtggcccgggacggtggcatcccc cagctcagctccaccttcacgctcctggtgcatgtgcaagccgaggacgacaacggaccc atctttgacactctcacctaccgtgtggaggtgcaggagggtgttcccatctccacccgc ttcctccaggtgagggccctggcacatgatgtggaatccacggcccttacctaccatctc cgtgcagatggggacgctgccagcttcggcatcgtgcctgagagcggctggctgtacgtc aagagtgccctggaccgggagacacgggacttgtatgtgctgacagtgctggcctcagtg ggaggcaccgggactgcggcagacgcacggaaaactggcaccagcacggtgaggatcagc gtcactgatgagaacgacaacagccctcggctgagcgaggagcgctacttcttcaccgtg tccgagaatcaggctcctggcagcagtgtgggaagggtgatggcaagcgaccgggacgcc gggcagaacagccggctcacctatcgcctgctccagcatgatcccaacttccttatccac acacagacaggagaggtcagcaccaagcacagtttggatcgggagcagcagtccagtttc cagctcctggtgattgtgcaggatgggggagcgccgccccgcagtgccaccggaaccatc tatgtcactgtgctggatgagaatgacaacgctcctgctttcctccacgtgggcagtggt caggagctaactgtgcaggtgctggaagagaagccatcgggactcctggtcgcctccctg caggccaaggaccctgacgagggggagaatgggaccatcatctactcactgataggagcc tgggcagagcgtttcactctgcatgtggctactggagagctgcggacagccacagttctg cgccggactgaccgtgccgagtacatcttcaccgtgacagccagcgaccgcggcgtggtg cctcgcagcacgtcagccatccttcgtgtccaggtgctgccatcctcccgtgtgctgcca cggcctgatgccactgtgttgaccctgcatcctctcgagggggtcaagccagggtctgtg attggttcagtggcccccccggatgcccctgtgcgaggacaactgatctacacggtggta ggaggtggtggggacggcacctttgtggttgatagcatgacaggggagatttatgctgcc cgtgagctggactatgaagctggggcacggcacgtgctccaggtgagtgctgaggacacg cagcacggctatccctccagcaggttggtgctggtccagatccacgttcaggactgcaat gaccaggcacccaccttccctgaagaccccattactattgtggtgcctgagaatgcccag gctggctcctccatcttcaccttccaggcgctggatggggatggagtgggccccaacagt caggtgcgctatgctctgctgcacctggagccaccgggagcccccttccagctcgacagc cgctcggggcagctgaccctgcgccagggcctcgaccgggaggctgctgcctccttcctg ctggtggtggaggccacggaccaggcccgcaacgtcagccagcgccgctcgactgccgtc acagcccgagtgttcgtgactgacgagaacgacaatgtgcccgtcttcctctccccggcc accgtcagcgtcatggaggaccagcccacaggctttgtggcactgcacgtggtggcccag gacagcgatctgggagagaacggacgtgtgagctactccttgcgagcaggcaacggtgac ggccgcttccacctcaaccccagcactggtgccctctccatcgtgcgggccctgaaccgg gaggaggtggcacagcacaacctgacggtggtggccacagaccacggcttcccacgcctc tccaccacacagctgctgtctgtgctggtgctggatgtcaacgatgaggctcctgccttt gagaaacctgagtatgaagcccacatcatggagaacctgccagctggcagcccagtgctg caggtgctggccacagaccgggatctgggtgccaatgggcaggtgtcttatgggggtctc tctggggggccgttctccatccacccacagacagggctcattgtcaccacgcgccccctg gaccgggaggagcaggagcagcatgtgctgacagtctacgcgcgggacgctggcctgcca cccagcctcaccaaggccacagtgtggatcacagtgggggatgagaatgaccatgcaccc cacctggagagcgagtcctgctccgtggaggttcctgagaaccagagtcgtgtggcactc tacaccctgcgggccactgatcctgatggtggggagaatggacgcttggaataccgtctg gcaggtggagaccctgggcaggatttcagtctagaccccgtctccggtgtcctctccact gcacatgcccttgaccgtgaacaaattgcttcttacagcctcattgtagtggtgcaggac cacggctccccaccacgcagtgccaccatgtcggtgactgtgcaggtgttggacctcaat gacaatgcacccagttttgctcaggccagctacacagtggaggtgccagaggacttgcca gtcggtgccctggtgctgcagctggtggctgaagacccagatgagggcaccaatgggcag gtctcatattacctgggcaatgagtcgctgggcatgttccaggtggagccacagagcggg tgcatccggagcgcccaggcactggaccgggagcgccagcccacctacagcttcctggcc aaggcggtggactcggcaccatgggagcccaagagcacagctgtgcgtgtcactgtcgtg gtgcgagatgtcaatgaccatgttccggccttcctgcacagcccactcaccgtcaacctg tcccgccacacgccgctcaagcaggtggtggccaccatgagggccgaggacagggacgcg ggtgccaatgcctccatcctgtaccgctttgccacccccagctccgccttcgcaatcaac tcctacacgggggacatccagctgctgcagccccttggctcactcagccagcgccagcgg acactctttgtgctggccatggacctggggcagccagcgctctcttccacaggagtagtg gtgatccatgtgcaggaggagccctaccgaggcctgcgctttccccgcagcaccagtgat gtggccctggccgaaaatgctgccccaggcactgcggtggcgagtgtccaggccatgcac atggggggctcctcggggcacatcacctacagcatcatcagtggcaacgagaggaacacc ttcctgatccagcccagctcaggtgccatctcagtgcaggactccagtagcctggacttt gaggccagcccccggctgcgcctggtgatccaggcagagactgcggcttcctttggcttt atggccataaacctcaacctccaggatgtgaatgacaacctgccccgcttccagctgcag aactacgtggcgttcatctgggagtcacagagctatgactcgcctgtcatacaggtgctg gcagatgacctggaccagggagtgaacgggcaagtgacttacgctatcaaccagtccctg ccaatgccaggcttgtaccacattgaccctcagactggcaccattaccactgctgccatc ctggacagagagatctggtcccagacccgcttggtggtgacagcgatggaccgaggaaca ccaccgctcatgggctcggccacgctgactgtggtggtgatggacatcaatgacaatagc cctaccatcccggtcccctgggagatccgtgtccctgagaacacactgctgggcacccag atagcccagctgactggcaacgatgtggactcgggcccttcgctctcctacacgctgctg ctggagggagacgaggcagacaccttcggggtgctgcgctatggtggccacattgccctg acagggccactggaccatgaacagcgcagccgctacaccctcaccctgcgtgcctctgac acacgccatgagactgaggccaacctcaccgtccttgtggaggatgtgaacgacaatgtg cccacctttacccaggttttctatcaggtgctgctgccagagcacacacctgctggcagt gtcatcctcactgtgagtgcaactgaccccgactcagggagcaatggggacatcaccttc cacctggcggtgcccagccccgatgttgccatcgaccccagcaatgggaccatcttcacc acccggcaggtggagttcaatgccagccagcccaccctggatctggtggtggaggcgcgt gaccatggctctcccagcctctcatcctgggccacagtgcaactccaggttctggatgtt aacgatcacagcccccgcttccaggagccatgctacaatgccagtgttcccgaggacctg cgcccaggcaccactgtgctaaccctggaggcgggtgacgctgacctgtcccgggagaat gctggctttgactacaccatcgtcagcgggaacagcggcaacgccttccaggtggagagc cgggtggcctgggccgggggacagctccgcacgcagggagccctggtgcttgtggagtcc ctggactttgaggccatcccggtgtacaacttgaccgtggcagcgtcagaccggggcctg ccacagcgcagtgccaccgtgcccgtgctcatcagtgtgcaggacgtcaatgacaacccg cccgtgttcacccgggccgagtatcgtgcagcggtgagcgaggccacgctgcctggcact gagctgctgcgcgtggcagcccacgatgccgactcagggccacggggccgcgttcactac accatcagctcaggtgaccagcaggggctgttccagcttcatgagagcacgggggctctg agcctggtgcacccactggatcgggaggcccaggcgctgcacacgctggtggtgcgggcc acggacacaccaggtgggcactttgccctggtccccgtggccattgaggtgaaggacatc aacgacaataagccgtacttcccagtggaggtgctgagcgccagcatccgggagaacttg ccccccggcacgctggtcaccacgctgcgtgctgtcgatgccgacaccggcgcctttggg gagctgcggtacgtggtgctggagcaggcagtgggggaccccaccacgggggacggccgg gacgcctttgctgtcaatgggagctctggggagctgcgctcccgcctcacctttgactat gagcgagccaaagccttccagctcctggttcaggccactgatgctggcaatgcctcggcc actgtgactgtgcaggtgctggtgacaggggaagatgagtatgatcccatcttcctaagc ccctccttcaacttcgaggtgcctgagggtgcacgcaaagggcagaccattgggcgggtg ctggccacggacgaggatgagggggcagacggtgtcgtattgtacaccctggcaaagccc tcaccatactttgccattaaccagaccacaggctccatctacctgcgtgtggacagccag ccccaagctggggctgggcgtgccaagagggagccacgggagataagcctggaggtgcag gcacgcagccccctgcctgcttcccgtgtggcctctgcacaggtcaccattgacgtcacg cacacctcctttggcctggcacccgacctcaacctactgctggtggctgtggccgcctcg ctgggcgtcgtggtggtgctggctgccgtggccatcgtgctggcactggtacgttcccgg cagcgtcagggccacaagaaggcagagggggagggggcactggcccgtgcacagagtggg tccttgcagaagctgggccgtgaggagccagcgctgcccggggctgagcacatctaccac caggcactgccagggtatgggaccgagccggcggggccctacactcggggtggctcactg gacccctcgcattccagcggccgtggctctgctgaagctgctgaggatgatgagatacgg atgatcaatgagtacccacgcgtggccagcatcacagcctccatgcaggagcacatcgct gcccgtggccctgactctggcatccagcaggatgctgaccagctctccgacatctcctgt gagccagctgcattggagagcgcccagtggttcaagagcaagaagggctctgggctgctg ctgccggggccatccctgcagctgtaccgtgaggatggggggggcagcgccttcctgggc gtccgctgcggcctcagtgtctcctctcagccgcaggactacgccttcccagaggacggc aagccctccgtggagggctcgctcaccgccatcgtggccagcgatgaggagctccgcggc agctacaactgggattacctgctgaactggtgtccccagttccagccactggccagtgtc ttcacggagattgcccgcctcaaggatgagagctccctgcgcaagcccttcccagccaag cccaaggcagagcccaagccccgcattgaccccccgcccctcatcacctcggtggcccat ccaggtgccaagtctgtgccccccaagccaccaccaggcaggaccttcccgcacccctcc tccctgcgccgctcgcccatcagccacgagggttccatttcgtcctccgccatgtcgccc agcttctccccatcactgtccccgctggccacccgctcccctgtggtctcgcccttcggc atctcacaggggccatccacctccaccatcagtgctgagcactcactggagccccctgag gaggccgagctcaggatttag

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