Parus major (Great Tit): 107216122
Help
Entry
107216122 CDS
T04864
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
107216122 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107216122 (NIPBL)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
107216122 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
107216122
NCBI-ProteinID:
XP_015508187
Ensembl:
ENSPMJG00000015808
LinkDB
All DBs
Position
Z:11135707..11276926
Genome browser
AA seq
2776 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAILARNPNVFREKSMQNRYGVQS
GMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTAHPQMQQASVSSPIVTAGMRNLHENKVSSQLSGNSANHHADNS
RHGSNEDYLQMVHRLSSDDGDPSIRNAASFSLRSPQSVCSPAGSDGALKGSRQPLIQQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNAAQCL
PQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSQQGAITSYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQENKPPEAGGATGGNRAASQETGSAGNGARPA
LMVSIDLQQAGRADSQATVTQDLDTIKKPEEIKQYNDGFVCVPQEDAVGVLKFKPENHPE
IFRKKSDFESQKTGIQQNENRQMEFQQNESRRLESKYNESKQLEVKHESRQMEMKQNENR
QTESKQNESRQMEMKQNDGKQNNGKQEIRQRPETPKQKSEGRPETPKQKSEGRPETPKHK
HDNRRDSSKPLSEKKIEISRHKLDVKSDPSRMKPESRPEPTKPRPDGRSVSDTPRRDQDS
LKQRSEERGESERYKGDPSKIRRPEYLRSSNKNEHDSKHGIKSDSSKPEKFERKYRHESG
DSRFSSGDQKSRPDSPRIKQETKGDSSKSRPDKPGFKSPNSKDERRTDGNKSKVDSNKAH
GDNKAEFPSYLLGGRSGALKHFVIPKIKRDKDGNVTQESRKTEFRGEHKDKVEKIGLVED
LNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSCFKPNKNKSSKPNKGSIDQSVLKELPP
ELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDRDE
AWEYEEHDRRSSGDHRRSGHYEGRRISGSGRYRNRSPDDSDMDDYSSPPSLSEVARKMKK
KEKQKKRKAYEPKLTPEEMMDSSTFKRFTASIENILENLEDMDFTAFGDDDEIPQELLLG
KHQLSELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLLNHNNDTEDEER
LWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYDP
VYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQV
SSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFR
LNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSAEKDSNSEEESNKKVDQDVLITNSYETA
MRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLVH
QFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSLARILKQVSGGEDEIQQLQKA
LLDYLDENTEIDASLVFSRKFYVAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETTG
QIMHRAESRKKFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIYL
TQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVEL
LGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMIR
RVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQN
LLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLVACITTLFLFSK
IRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDLM
KLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKNQHQEDPNSTILT
ANKPALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAII
GLGFAFIQHPSLMFEQEVKTLYNSILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQADRD
WKKVAKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHNQSSVRHFALNVIALTLNQGLI
HPVQCVPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINTC
PKDPVRGFRHDESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNMLLYIADN
LACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKKKERKPSSDEETESDSNS
GSGSESEEEASKPRRLRKRVDSDSDSDEENDINAVMKCLPENSAPLIEFANVSQGILLLL
MLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSDMANSKIT
EEVKRSIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPKNNAAETE
DDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDVIAICCPKYKDRPQIARVV
QKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIALTSANKLTNKV
VQTLRSLYAAKDGTSS
NT seq
8331 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtcttaca
gaccttttgaaccagctgcctcttccatcacctttacctgctaccacaacaaaaagcctg
cttttcaatggacggatagctgaagaggtgaactgccttctggcttgcagggatgaaaat
ctggtttcacagcttgtccacagtctcaatcaggtgtcaacagatcacatagagttgaaa
gataaccttggcagtgatgatccagagggagatataccagtcttgctgcaggctattctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatacggggtacaaagc
gggatgatgatgtcacagtttaatatttctcagaattccatgcgtggtagtcctgcatct
tccaattatcaacaaaccactatctcacatagcccttccagccggtttgtgccgccacag
acaagctctggtaacagatttttggcacaacagaacagtccagtgcctagtccatatgct
cctcagagccctgcaggatacatgccgtattcacatcctccaagttacacagctcatcct
caaatgcagcaagcttccgtatccagtcccattgtcacagctgggatgaggaatctccat
gaaaataaagtttcaagtcagttgtctggaaattcagctaatcatcatgctgataattct
agacatggctcaaatgaagactacctacagatggtgcacagacttagtagtgatgacggc
gatccttcaataaggaatgctgcatctttttctttgaggtcaccacagtcagtctgctct
ccagctggaagtgatggagcccttaaaggatcaagacaacctttaatccaacaatctcag
cctccaccttattcatcacctagagatgttcccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagctctccttccaaggactccactaagcttacatta
agactgtctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttg
gaaaacagcagtgtgtcagagggtgatattccttttaatgtgcagtacccaggacagact
tctaaaacacccgttactccacaggatgttaaccgcccactaaacgctgctcagtgtttg
ccgcagcatgaacagacagctttccttcaggcacaacaagtgcctgttttacaacagaac
acttccgttgctgcaaaacaacctcaaactcctgtggtacagacacagcaacaggtttcg
caacaaggagctataacgtcatatgatgaagtagagttggatgcattggctgaaattgag
cggatagaacgtgaatcagctattgaaagggagcgattttcaaaagaagtgcaagataaa
gataagcctctgaagaagcgaaaacaagaaaacaaaccaccagaggctggaggtgctact
ggaggaaatagagcagcttctcaggagacaggttctgcaggaaatggggcaaggccagca
ttgatggttagtattgatctgcagcaagcaggaagagcagactctcaggcaacagtaact
caggatttggacaccatcaaaaaacctgaagaaattaagcagtataatgatgggtttgtg
tgtgttccccaagaagacgctgttggagttcttaaatttaaacctgaaaaccatccagaa
atttttagaaaaaagtcagactttgaaagtcaaaagacaggtatccagcaaaatgaaaac
agacaaatggaattccagcaaaatgagagcagacggttggaaagtaaatacaatgagagc
aagcagttagaagtgaaacatgaaagcagacaaatggaaatgaaacaaaatgagaacaga
cagacagaatctaaacaaaatgagagcaggcaaatggagatgaaacaaaatgacggaaaa
caaaataatggcaaacaggaaatacgacagaggccagaaacaccgaaacagaagagtgaa
ggcagacctgaaacaccaaaacagaagagtgaaggcagacctgaaacaccaaaacataaa
catgataataggagggactccagtaaacctttgtcagagaagaaaattgaaatatctagg
cacaaactagatgtgaaatctgatccttcaaggatgaaacctgaaagtcgacctgagcca
accaaaccaaggcctgatgggcgctcagtttctgatacaccaaggcgtgaccaggatagc
cttaaacaaagatctgaggagaggggggagtcagagaggtacaaaggagatccatccaag
attagaaggcctgaatatttgcgatcctcaaacaaaaatgaacatgattctaagcatggt
attaaatctgatagttcaaaacctgagaaatttgaaaggaaatacaggcatgagtctggt
gattcaaggttttcttctggggatcagaaatcaagacctgacagccctcgtattaaacag
gaaactaaaggggattctagcaaatcaagacctgataaacctggttttaagtcaccaaac
agcaaggatgaacgaaggacagatggtaataagagtaaagtagatagtaataaagcacat
ggtgacaataaagcagagtttcccagttatttgttggggggaagatcaggcgcattgaaa
cattttgtcattccaaaaatcaagcgtgataaagatggcaatgttactcaggagtcaagg
aaaactgaatttagaggtgaacataaggacaaagtagagaagattgggctagtggaagat
ctaaataaaggagctaagcctgtagttgtccttcaaaagctttctttggatgatgtgcag
aaatttattaaggacagagaagataaatcaaggggctcttgttttaaacctaacaagaac
aagtcatccaaacctaataaaggtagcatagatcagtcagtgttaaaggagttgcctcct
gagcttctggcagaaattgaatccaccatgccactttgtgaacgtgtgaaaatgaacaag
cgcaaacgtagcacagttaatgagaaaccaaaatatgctgaaatcagttctgatgaagat
aatgacagtgaagaagcttttgaatcttctcgtaagagacacaaaaaggatagagatgaa
gcttgggagtatgaagaacatgacagaagaagttctggtgaccataggagaagtggtcat
tatgaaggaaggaggatttctggtagtggccgttaccgtaatcgcagtcctgatgactct
gatatggatgattattcttcacctcctagcctcagtgaggtggctagaaaaatgaagaag
aaagaaaaacagaaaaagaggaaagcttatgaacctaaattaacacctgaagaaatgatg
gattcttcaaccttcaaaaggtttactgcttcaatagagaatattttggaaaatctggaa
gacatggattttacagcttttggtgatgatgatgagatcccacaggaattgttactgggc
aaacatcagcttagtgagttgggtagtgaatctgcaaaaatcaaggcaatgggcattatg
gacaagctctcaacagataaaacagtaaaagtcctgaatattttggagaagaatattcaa
gatggatcaaagctttctactttacttaaccacaataatgacactgaagatgaggagaga
ttatggcgagatctcattatggaaagagtgacaaaatctgctgatgcttgtcttactgct
atcaatattatgacatcaccaaatatgcctaaagctgtatatattgaggatgtaatagaa
agagttatccagtacacaaaatttcatttgcagaacactctctatcctcagtatgatcct
gtctatcgagtggatcctcatggtggtggtgttttaagttcaaaagcaaaacgtgccaag
tgttccacccacaagcaaagagttatagtgatgttgtataacaaagtttgtgacattgtc
agcagcttgtcagagttgcttgagatacagcttcttacggacacaactattcttcaggtg
tcatctatgggaataacacctttctttgtagaaaatgtcagtgagctacagttatgtgcc
atcaaattagtaactgcggtgttctcccggtatgaaaaacacagacagctaatactggaa
gaaattttcacttctcttgcgagactaccaactagcaagaggagcttgagaaacttcagg
ttaaacagcagtgacactgatggagagcctatgtacattcagatggtaacagcactagtt
ctgcaacttattcagtgtgtggtgcacttaccatcagcagaaaaggattctaattcagag
gaggaatcaaacaagaaagtggatcaagatgtgcttattactaactcatatgaaactgcc
atgagaacggcacaaaacttcctttctatttttcttaagaagtgtggcagtaaacaaggg
gaagaagattacaggccattgtttgagaactttattcaagatcttctttctacagtcaat
aaaccagaatggccagctgcagagttgctacttagcttactaggaaggctattggttcac
cagttcagtaacaaatctacagaaatggcattaagagttgcttcacttgactatcttgga
actgtagcggcaagactgaggaaagatgcagtcactagcaaaatggatcaaggatcttta
gccagaatcctcaaacaggtttcaggaggagaggatgaaattcaacagctgcaaaaggct
ttactagattatctggatgagaacacagaaattgatgcatcattagtgttttctcggaag
ttttatgtggctcagtggttccgtgatacaactatggagacagaaaaagcaattaaatct
cagaaggatgaggattcatctgaaggaactcatcatgcaaaagatgttgagaccacagga
caaatcatgcatagagcagaaagtcgcaaaaaatttcttcgtagcatcattaaaactgct
ccatctcagttcagtacattaaagatgaattctgatactgtggactatgaagatgcatgt
ttgattgttcgctacttggcctctatgaggccgtttgcccagagcttcgatatttatttg
acacagattctgcgtgtacttggtgaaaatgcaattgctgttcgaacaaaagccatgaag
tgtttgtctgaggtggttgctgtagaccccagtattctagccaggctggatatgcaacga
ggagttcatgggcggctaatggataactccactagtgtacgagaagcagctgtggagctg
cttggacgatttgtgctgtgccgtcctcagcttgctgagcagtattatgacatgctgatt
gaaagaatattggatactggtatcagtgtcagaaaaagagtaataaaaatacttagggat
atctgcattgaacaaccaacttttcccaaaattacagaaatgtgtgtgaaaatgatccgg
agagtcaatgatgaagaaggcattaagaaattagtaaatgagacattccagaagctctgg
tttactccaactccacaccatgacaaagaagcaatgacaaggaaaatcctaaacatcact
gatgtggttgcagcttgtagagatacagggtatgattggtttgaacaacttcttcaaaat
ctgttgaagtcagaagaggatgcctcatacaaacctgtgaagaaagcctgtactcagcta
gttgacaatttggttgagcacattcttaaatatgaagaatctttatcagattctgacaat
aaaggtgtgaattctggtcgcttggttgcttgcataaccactttgttcttattcagcaaa
ataaggccccagctaatggtcaaacatgcaatgaccatgcagccatacctgaccactaaa
tgtagtacccagaatgatttcatggtgatctgcaatgttgcaaaaatcttagagcttgta
gtgccgctaatggagcacccaagtgagacctttcttgccactattgaggaagacctcatg
aaactcatcatcaaatatggcatgacagttgttcagcactgtgtgagctgtcttggggct
gttgtgaacaaggtcacccagaactataaatttgtatgggcttgttttaacagatactat
ggtgcactttctaaattaaaaaatcaacaccaagaagaccccaacagtacaatacttact
gccaataaaccagcactccttagatcacttttcactgttggagcactgtgtcgccatttt
gattttgatcaggaagattttaagggcaacagtaaggttaacattaaggataaagtactt
gaactgctgatgtattttacaaagcattcagatgaagaagtacagacaaaagccattatt
ggtcttggatttgcatttatacagcacccaagtttaatgtttgaacaagaggtgaagact
ctgtacaacagcattctttcagataagaactgttcagtaaacttaaaaatccaggtgtta
aaaaacctccagacctacttgcaggaggaggatacacgtatgcagcaggcagacagagac
tggaaaaaagtagcaaaacaggaagacctgaaagaaatgggtgatatttcctcagggatg
agtagttccatcatgcagctatatctcaaacaggtccttgaggctttctttcataaccag
tccagtgtacgccactttgctctaaatgtcattgcactgacattaaaccaaggtctcatc
catcctgttcagtgtgtgccatacttaattgctatgggcacagatccagagccctctatg
cgaaataaagctgaccaacagttggtggaaatagacaaaaaatatgctgggttcattcac
atgaaagcagtggctggtatgaagatgtcttaccaagtacaacaggcaattaatacctgc
ccaaaagatcctgtgagaggatttagacatgatgaatcatccagtgcactgtgttcacac
ctctactccatgattcgagggaaccgtcagcacagacgagcctttctaatttctttactc
aacctctttgatgatactgcaaaaacagaggtgaatatgcttttgtacatagcagacaat
ctagcctgttttccttaccaaacacaggaagagccactgtttataatgcatcatatagac
attacactatcagtttctggtagcaacctactacagtcatttaaagagtccatggtgaaa
gacaaaaaaaaggaaagaaagccttcatcagatgaggagactgagagtgacagtaacagt
ggtagtgggagtgaaagtgaggaggaagcttctaagcctcggaggttacggaaacgagtg
gactctgattcagattctgatgaagagaatgatataaatgcagtgatgaagtgtttacct
gaaaattcagctcctttaattgaatttgctaatgtctcccaaggcatattattactttta
atgctgaaacagcatctaaagaacctctgtgggttctctgatagtaaaattcaaaaatat
tctccatctgaatctgcaaaagtgtatgataaagctataaacaggaagacaggagtgcat
ttccatccaaaacaaactttggattttctgcggagtgatatggctaattccaagatcaca
gaagaagtgaagaggagtatagtaaaacagtacttagatttcaagctccttatggaacat
ttggatcctgatgaagaggaagaagatggagaggtgtcagctagcacaaatgctcggaac
aaagcaattacctcgctgcttggaggaggcagccctaaaaacaatgcagctgagacagag
gacgatgaaagtgatggggaggatagaggaggaggcacttcagggtcattgagaaggtca
aaacgaaattcagactctacggagttggcagcacagatgaatgaaagtgttgatgtcatg
gatgtcatcgctatttgctgtccaaagtacaaagaccgaccacaaattgcaagagtagta
cagaaaaccagcaatggcttcagtgttcagtggatggcaggctcctacagtggctcctgg
actgaggctaagcgccgtgatggccgcaaactggtgccttgggtagacactattaaagag
tcagacattatttacaaaaaaattgctctaacgagtgctaataagctgactaataaagtt
gtgcagactttacgatcgctgtatgccgccaaggatggaacttccagctaa
DBGET
integrated database retrieval system