Parus major (Great Tit): 107216158
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Entry
107216158 CDS
T04864
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj03013
Nucleocytoplasmic transport
pmaj05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107216158 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
107216158 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmaj03019
]
107216158 (NUP98)
03036 Chromosome and associated proteins [BR:
pmaj03036
]
107216158 (NUP98)
Messenger RNA biogenesis [BR:
pmaj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107216158 (NUP98)
Chromosome and associated proteins [BR:
pmaj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107216158 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ZapB
Motif
Other DBs
NCBI-GeneID:
107216158
NCBI-ProteinID:
XP_033371614
Ensembl:
ENSPMJG00000000924
LinkDB
All DBs
Position
1:148517..183558
Genome browser
AA seq
1759 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTSSGGAFGTSAFGSNNTTGSLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGSLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FSFGGTSTLGQPNTNTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPAGFGTTTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGTGLGTG
FGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAVLQQHLNSLAYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQSAGSAKSQLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLSSSNLFSPVSR
ENEDLASPSEYPENGDRFFLSVPPEENHRQDGEREEEEEAHEVTRFYTNPIAKPIPQSLE
GSGHKPPAGVDDTIVALNMRNGLEGSSEDASFQEDSLQDERDEEAEAVHQLHPAGIVLTR
AGYYTIPSLEELARLTNDRNECIVTDFTIGRKGYGSIYFEGEVNLTNLNLDEIVHIRRKE
VIVYPDDERKPPIGERLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMGYEGRLEAVSRR
QGARFKEYRPETGSWVFKVAHFSKYGLQDSDEDEEDHPSKVDTKKLKTTPVPPPGQLLPQ
QMALNGKPAPLAQPPELEQLGRVVELDSDMADITQEPAHEPLAEDALEEQEAVPASTHIA
STQGINPYVLQIMKASLLADDDDLDLILDYPGKQPVKMDTSQEICSPRLPISKSQGQKRH
TVAGLLQSKFASVLSQAAGAAVADAKGPRTLGSPPCAAPWAAVSPLASAFSVPAPVPEVQ
VKTVGARRQRGLVPLERSITYGKGKLLMDMGLFMGRSFRVGWGPNWTLVNCGDQLSGSSE
AEDPQLEPVEYGFLPTPVAPKSLTESPFKVHVEKLSLEQWKMDRDKELYLTPLEIKLKHS
TVHMDEPCPLLAPNPGVSAIHDYADWARKASEDPAVAETVVKHWCLAWTLCEAIWGNLKE
LEARLEEPSEYVLALERRRAFSRWLSETAAGRIEEEVSLSRHGSHVEAVFSCLTGKRIGE
ACRLAQQAGDHRLALLLAQLAGSQPVRDLLTLQLVDWHRLHSDRFIQEERLRLFALLAGK
PVRTGWGLFFMLVHSSGENTSEYEKYACCPLPPYLEDSGCVIEEDDNGGRPLRDVCFHLL
KLYSDRSYELDQLLDPRSVTSDPLDFRLSWHLWEVLRALNYCHLSQQSWGVLNSSYAAQL
ESEGLWEWAVFVMLHEPDTPTREKAVRELLSRHCALADTPESWAKESFLTQRLCLPPRWI
HEAKAVRARMEGDRHKEALFLFKAGHWNQCHRLVVRHLASDAIINENYKYLKGFLEDLAP
PERSALIQDWELAGLVYLDYIRVNEMLDRIQQLDVSTYELERLHTKVTSLCNRIEQLQCH
NARDRLAQSDMAKRVANVLRAVLSLQQGPEPGPEPAEPRVPLRLLAPHIGRLPMPEDYAL
EELRGLTQAYLRELALAAH
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcctttggaactccattcggaggcagcaccggctttggcacaacttca
acgtttgggcaaaatgccggctttggtacgagcagcggaggagccttcgggacgtcggcc
ttcggctccaacaacaccacgggcagcctctttgggagcacacagacaaagccaggagga
ttgtttggctcaaccacattcaaccagccagccacctcctccaccagcactggcttcggg
tttggaacgtccactggaacgtcaaacagcctctttggaaccaccagcactggtggaagc
ctcttctcatcccagaataatgcctttgcacagaacaaaccagctggttttggaaacttt
ggtacgagcaccagcagtggagggctctttgggaccaccaacaccacttccaaccccttt
gggagcacatctggctctctctttggcccaaccagctttactgctgctccaactggcacc
actattaaatttaatcccccgaccggcaccgacaccatggtgaaatccggcgtcagcacc
aacatcaacaccaagcaccagtgcatcactgccatgaaggagtacgagagcaagtccctc
gaggaactccgtttggaagactaccaggcaaataggaaagggcccacgaatcctgtcgga
gcaggagcaactgctggcttgtttggctcttccactgccacctccagcacagccacagga
ctttttggctcttccactaccaatacaggcttttcctatggacagaataaaactgctttt
ggaaccagtacgaccggctttggcaccggcaccaccggggggctctttgggcagcagtca
cagaccacgagtctgttcaacaaacccttcggccaggccaccaccacgcagaacaccggc
ttctccttcgggggcaccagcaccctgggccagcccaacaccaacaccatgggtctcttt
ggggtcacccagccctcacagcctggaggcctttttgggacagctgccaatacaaatgct
gggactggatttggaacgggaactggcctttttggacaagccaacacaggatttggggtt
ggtggttcgaccctgtttgggaacaagcctgctggatttggaaccaccacgaccagcgct
ccctcgttcggtaccaccacaggcgggggcctctttggttttggtgccaacactgctgga
aacagcttgtttggaaataagcctgcaactgggactctgggcactggacttggaacaggc
tttggaacagctctgggggcaggacagacgtccctgtttggaaacacccagccaaagctg
gggggaacgctgggaacgggagcatttggagccccaggattcaacacatccacggctacc
ctgggctttggggcccctcagcctgctgtagctctgacagaccccaacgcctctgcagcc
cagcaagctgtcctccagcagcacctcaacagcctggcctactcaccctttggagactcc
cccctcttcagaaaccccatgtcagaccccaagaagaaggaagagaggctgaagccaacc
aacccagcagcccagaaggccttgacaacccccacccactacaagctgaccccacgccct
gccaccagagtgcggcccaaggccctgcagtcagcgggctcggccaagtcccagctcttt
gatgggctggatgatgatgaaccctccctggccaatggagccttcatgccaaagaagagc
atcaagaagctggttctgaagaacctcagcagcagcaacctgttctctcccgtgagccgg
gagaacgaggacctggcgtcgccgtcggagtacccggagaacggggacaggttcttcctg
tcggtgcctcccgaggagaaccacaggcaggacggggagcgggaggaggaggaggaggcc
cacgaggtgaccaggttttacaccaatcccattgccaagcccattccccagagcctggag
ggcagcgggcacaagccccccgcgggcgtggacgacaccatcgtggcgctcaacatgcgc
aacgggctggagggcagcagcgaggacgcctccttccaggaggattccctgcaggatgag
agggatgaggaggctgaggccgtgcaccagctgcatcctgcagggattgttctgacacga
gctggttactacaccatcccgtccctggaggagctggcccggctgaccaacgacaggaac
gaatgtatcgtgacagacttcaccatcggccgcaagggttatggatcaatatacttcgaa
ggagaagtaaatctaacaaacttaaacctggatgagattgtacatatccggagaaaagaa
gttattgtttaccctgatgatgaaagaaagcctcccattggggaacggttaaataggcgg
gcagaggtgacactggacggggtgtggcccacggacaagacgtcgcgctgcctgatcaag
agccccgagcgcctggcggagatgggctacgagggccggctggaggccgtgtcccgcagg
cagggcgcccgcttcaaggagtaccgccctgagaccggctcctgggtcttcaaggtagca
cacttttccaagtatggcttgcaagattcagatgaggacgaggaagatcatccttcaaaa
gtggacaccaagaagttaaagaccacacctgtgccacccccagggcagctgctgccccag
cagatggccctgaacggcaaaccagcgcccctggctcagcccccggagctggagcagctg
ggcagggtggtggagctggacagtgacatggcagacatcacccaggagccagcccacgag
cccttggcagaggacgccctggaggagcaggaggcggtgccggcgtccacgcacatcgca
tccacgcagggcatcaacccctacgtgctgcagatcatgaaagcttccttgcttgctgat
gatgacgacctggatttgatcctggattatcctgggaagcaacctgtcaagatggacact
tcccaagagatctgctcccccaggcttcccatttcaaaatcacagggacagaaaagacac
acagttgccgggctgctgcagtccaagtttgccagcgtcctttcgcaagcagcgggtgct
gctgtggcagatgccaagggcccgaggactttgggcagtcccccctgtgctgccccgtgg
gcggcagtgtccccgctggcctcggcgttctcggtgcccgcgccggtgcccgaggtgcag
gtgaagacggtcggggctcgccggcagcgcgggctcgtccccctggagagatccatcacc
tatgggaaagggaagctcctgatggacatgggactgttcatgggccgctcgttccgtgtc
ggctgggggcccaactggactctggtcaactgtggagatcagctgagtggctcgagtgaa
gcggaggatcctcagctggagcccgtggaatacggattcctgccgactcccgttgctccc
aaatcactcacagaatcccctttcaaagttcatgtggaaaagctgagcttggaacagtgg
aagatggacagagacaaggagctgtatctcactcctctggagatcaagctgaagcacagc
actgtccatatggatgagccctgtcctctcctggcccccaaccccggagtctcagctatc
catgactatgctgactgggccaggaaagcatctgaggatcctgctgtggcagagactgtt
gtgaagcactggtgcttggcctggacgttgtgtgaggccatttggggcaacctgaaggag
ctggaggccaggctggaggagcccagtgagtacgtgctggcgctggagcgccgcagggcg
ttctcacggtggctgtcggagacggcggccgggcgcatcgaggaggaggtgtccctgtcc
cggcacggcagccacgtcgaggccgtgttcagctgcctcacggggaagaggatcggcgag
gcctgcaggctggcacagcaggcaggtgaccatcgtctggcactgctgctggcacagctg
gccgggagccagcccgtgcgggacctgctgaccctgcagctggtggactggcaccgcctg
cacagcgaccgcttcatccaggaggagcggctgcgcctgttcgcgctgctggcagggaaa
ccggtaaggacgggctgggggctgtttttcatgctggtccacagttctggggagaacacc
tcagaatatgaaaaatacgcctgctgtcctctgcctccttacctggaagattcggggtgt
gtcattgaagaggatgacaatggaggaaggcccctgagagatgtctgcttccatttgtta
aagctctacagtgacaggtcctatgagcttgaccagctgctggatcccaggagtgtcacc
tctgacccgctggatttccgcctcagctggcacctgtgggaggtgctgcgggcgctgaac
tactgccacctgtcccagcagagctggggggtgctgaacagcagctatgctgcccagctg
gagagcgaggggctgtgggaatgggctgtgttcgtcatgctgcacgagcctgacacgccc
acccgggagaaggccgtgcgggagctgctgagccggcactgcgccctcgccgacaccccc
gagtcctgggccaaggaatccttcctgacacagcggctctgcctgcccccgcgctggatt
cacgaggccaaggcggtccgggccaggatggagggtgacaggcacaaagaggcccttttc
ctgttcaaggctggccactggaaccagtgccacaggctggtcgtcaggcacttggcctca
gatgcaattatcaacgagaactacaagtacctgaagggattcctggaagacctggcgcct
ccggagcgcagcgcgctcatccaggactgggagctggcagggctggtgtacctggactac
atccgtgtcaacgagatgctggacaggattcagcagctggatgtgtccacctatgagctg
gagaggttacacaccaaagtgacgtccctgtgcaacaggatagagcagctgcagtgccac
aacgccagggaccgcctggctcagtcagacatggcgaagcgcgtggccaacgtgctgcgg
gcggtgctgagcctgcagcagggccccgagccgggccccgagccggccgagccgcgcgtg
cccctgcgcctgctggccccgcacatcggccgcctgcccatgcccgaggactacgcgctg
gaggagctgcgcggcctcacccaggcctacctgcgcgagctggccctggccgcgcactga
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