Parus major (Great Tit): 107216184
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Entry
107216184 CDS
T04864
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaj03400
]
107216184 (SMC5)
DNA repair and recombination proteins [BR:
pmaj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
107216184 (SMC5)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
CCDC18_2nd
AAA_21
AAA_29
GIT_CC
Motif
Other DBs
NCBI-GeneID:
107216184
NCBI-ProteinID:
XP_015508370
Ensembl:
ENSPMJG00000009101
LinkDB
All DBs
Position
Z:complement(63713395..63753177)
Genome browser
AA seq
1059 aa
AA seq
DB search
MAAAREKGKAVGKVVKSGESQFVLGSIVRIFMENFLTYTLCEVRPGPNLNVVLGANGTGK
SSIVCAICLGLAGKPSFLGRADKIGLFVKQGCMKGVVEIELFKSPDNITITREIYVVSNT
SVWFINRKPVTLKTVEEQIAALNIQVDNLCQFLPQDKVGEFTKLSKTELLEATEKSIGPP
EMYQFHCELKNFREKERELENLCREKTTSLEKMKQRVERYKQDVERYHECKRHVDLIEML
ERKRPWVEYENVREQHEEVKQNRNQVKKELKCLKEMHAPWTKKIQEAEENLKNLDMKTRD
NTAEIRNISQKCKEKQDALEMKDKQIEEINQAFRMKKDEESNRQKKINQTQKIIEEWQNE
LDTMAVCENLQPQIDAVNTELRSLQEERANIDNDVSDLRAEKSNQEREEKRIIDRLGQLN
NIMHMKEENLKMRFRDTHSALMWLRNNKDKFKKKVCEPMMLEINVKDSRHAKYIENHISA
NDMKAFVFESQEDMETFLVEVRDHQKLRVNAVCAPAESCAENLPSRPIEELHRYGFFSYL
RELFDAPPSVMSYLCYQYRVHDVPVGTERTRDMIERVIKETNLRQIYTAEERYVIKLSSY
TKQNLSSNTCLREAQYLTSSVDMDERGQLENQQQDIGNTLKSLDARLTALFDRQKVLEHK
DNKLRQEKKELLERGNRRRQLESKIGVKYDSLRQLEQDAIDLKKEFQLANVKIKAINKQK
AELVTELMHLIKKIIPLNIVKVALALQMTKVTAEKNRLQSEYKAGTVQLRAAQQRFHELD
NRKQLLYEKCMELMKQARHVCRLGPDQDFPEEFQVAFQTLPDTLEEIDAFLNEEKTRASC
FAGLSASVVEEYNKQTEEIQQLTEFLEEKKNELSNYKQNISQVKEKWLSLLKVMIEQING
KFSRFFSSMQCVGEIDLHMENEEEYEKYGIRIRVKFHSSSELHELSPYHHSGGEKTVSTM
LYLMAMQELNRCPFRVVDEINQGMDPMNERRVFEMVVGTACKKRTSQYFFITPKLLQNLT
YNSKMTLLFVYNGPFMLETYKWNLKRIKRQQRRLRGMNE
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctcgggagaaggggaaagctgttgggaaggttgtgaagtctggtgagtcc
cagttcgttctgggctccatcgtcaggatcttcatggagaactttctaacgtacactctc
tgtgaagtacgtccagggcccaatctgaatgtggttctaggtgctaatggcaccggcaag
tcaagcattgtttgtgccatctgcctgggactggctggaaaaccgtctttcctagggcga
gctgataagatcggtctctttgtgaagcaagggtgcatgaaaggcgtagtggaaattgaa
ctgtttaagtcaccagacaatattactatcacacgagagatttatgtggtgagcaataca
tcagtgtggtttatcaacagaaaaccagtaaccctgaaaacagtagaagaacagattgca
gccttaaacatccaggtggacaatttatgccagtttcttcctcaggacaaagttggagaa
tttacaaaactgagtaagactgagttgcttgaagccacagaaaaatccattggtcctccg
gaaatgtaccagtttcattgtgaactgaaaaatttcagagaaaaggaaagagaactagag
aatttgtgcagagaaaaaaccacctcactggagaaaatgaaacagagggttgaacggtac
aagcaagatgttgaaagataccatgaatgcaagcgccatgtagatttaatagagatgctt
gagaggaaaaggccatgggtggaatatgaaaatgttcgtgaacagcatgaagaagtgaaa
caaaaccgaaaccaagttaagaaagaactgaagtgtctgaaagaaatgcatgccccatgg
acaaaaaaaatccaagaagctgaagaaaatttaaagaatctggatatgaaaaccagagat
aatactgctgaaatcagaaatatttcccagaaatgcaaagagaaacaagatgctttggag
atgaaagataaacagattgaagaaattaatcaggcattcagaatgaaaaaagatgaagaa
tcaaacaggcagaagaaaataaaccaaactcaaaaaataatagaggagtggcagaatgag
ctggatacaatggcagtctgtgagaatcttcagccacaaattgatgctgttaatactgag
ctgagaagcctacaagaagaaagggcaaatattgataatgatgtcagtgatctaagagca
gaaaaaagcaaccaagagcgggaagagaaaagaataattgatcgccttggacaacttaat
aatataatgcatatgaaggaagagaaccttaaaatgagattccgagacacacactctgct
cttatgtggctaagaaacaacaaagacaagtttaaaaaaaaagtttgtgaacccatgatg
cttgaaatcaatgtgaaagacagtagacatgcaaaatacattgaaaatcacatttcggcc
aatgatatgaaggcttttgtttttgagagtcaagaagatatggaaacatttctggtggag
gtgcgtgatcatcagaaactaagagtgaatgctgtatgtgcacctgctgaatcatgtgct
gaaaatttaccttcaagacctattgaggaattacaccgatacggatttttttcatattta
cgggagttatttgatgctcctccctctgtgatgagttacctttgttaccagtaccgtgtt
catgatgttcctgtgggaacagagaggaccagagacatgattgaaagggtcataaaggaa
accaatctgaggcaaatatatacagcagaagaaagatatgttattaaattatcttcttac
acaaaacaaaacctctctagtaacacatgcttgagggaggcacagtatctcactagttca
gtggatatggatgaaagaggacagttggaaaaccaacaacaggacattggtaatacatta
aaatcattggatgcacgtttgactgcactgtttgacagacagaaagttctggaacacaag
gacaataagctcagacaagagaagaaggagcttttagagagaggaaaccggaggaggcag
ttggaatcaaaaattggtgtgaagtatgatagtttaagacagctggaacaagatgctatt
gacctaaagaaggaatttcagttggcaaatgtaaagatcaaagcaataaataaacagaaa
gcagaacttgttactgaattgatgcatctcataaagaagatcataccactgaacatcgtc
aaagtagctttggctcttcagatgaccaaagtaactgcggagaagaacagactacagtca
gagtacaaagcaggaactgtacagctaagagctgcacagcaacgttttcatgaactggat
aataggaagcaacttctttatgagaaatgcatggaattgatgaaacaagctcgacacgtc
tgcagattgggtccagatcaagattttccagaagaatttcaagttgcttttcagactctt
ccagacacattggaggaaattgatgcttttctgaatgaagagaaaaccagggcttcctgt
ttcgcaggcctcagtgcttccgttgttgaagaatacaataagcaaacagaagaaatacag
cagttgacagaatttctagaggaaaagaaaaatgagttgagtaactataagcaaaacatt
tcacaggtcaaagaaaagtggctaagcctcttgaaggtgatgattgaacaaattaatgga
aagttcagtagattctttagttccatgcagtgtgttggtgaaattgatcttcatatggaa
aatgaggaggagtacgagaagtatggaatccgcattagagtcaaattccacagtagctct
gaacttcatgaattgtctccgtatcatcacagtggaggtgaaaaaactgtttccactatg
ttatacctgatggctatgcaagaactcaacagatgtcctttcagggttgttgatgaaata
aatcagggaatggatccaatgaatgagagaagagtttttgaaatggttgtgggaacggct
tgtaaaaagaggacatctcagtacttcttcattacaccaaagctcctgcagaatctcact
tacaatagcaagatgactctgctgtttgtctacaatggaccttttatgctggagacatac
aaatggaacttgaagcgcatcaagagacagcaacggcggcttagagggatgaatgaatag
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