Parus major (Great Tit): 107216216
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Entry
107216216 CDS
T04864
Symbol
SCRIB
Name
(RefSeq) protein scribble homolog isoform X1
KO
K16175
protein scribble
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
107216216 (SCRIB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
LRR_14
LRR_8
PDZ_6
LRR_4
PDZ_2
LRR_1
LRR_13
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
107216216
NCBI-ProteinID:
XP_033368391
LinkDB
All DBs
Position
2:complement(150055332..150139047)
Genome browser
AA seq
1817 aa
AA seq
DB search
MVSPGLRRWVSPAVLLTLSLLSQPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDIS
RNDIPEIPESIKFCKSLEIADFSGNPLSRLPEGFTQLRSLGHLALNDVSLQSLPTDIGNL
ANLVTLELRENLLKTLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLS
SLPPELGNLRRLVCLDVSENKLEHLPNEVSGLVALTDLLLSQNLLECIPDGIGQLKQLSI
LKVDQNRLTDMTESIGDCENLSELILTENMLTALPKSLGKLAKLTNLNVDRNRLTALPAE
IGGCANLSVLSLRDNRLALLPPELANTTELHVLDVAGNRLQNLPFALTNLNLKALWLAEN
QSQPMLKFQTEDDEKTGEKVLTCYLLPQQPSPSLENLLQNSVDESWTDTNLNRVSVIQFL
DEPKGDDDEESGAERRGLQRRATPHPSELKVMKKVIEVRRNEVNAAKADANPKSPNSEEK
RLSATSNRSEDSQLSTSTASVDCRAQDRERGWPNGQLPDGREMEKEVKPRAEEEHKEAAD
QEEEDVEVEYNEPTVHFAEDTLIRSEDEDEDEERPFPVEKQRLIRKDTPHYKKHFKITKL
PKPEAVVALLQGLNSDGVPKEEEELGGCNNNTEPRDQEEAWDEDDRKNGALSAQPSVKGV
SFDQANNLLIEPARIEEEELTLTIVRQTGGLGISIAGGKGSTPYKGDDEGIFISRVSEEG
PAARAGVRVGDKLLEVNGVSLHCAEHHVAVEALRGSGSSVSMTVLRERMVEPENAITVTP
LRPEDDYSPRERRGGLRFPECPEGAAATERFSTCLMRNEKGLGFSIAGGKGSTPYRAGDT
GIFISRIAEGGAAHRDGILHVGDRVISVIPRGLASRSGLRVGDRILEVNSIDLRHATHQE
AVNALLSNAQELTMLVRRDPPPPGMQEICIEKAPGEKLGISIRGGAKGHAGNPFDPTDEG
IFISKVSSSGAAARDGRLKVGMRILEVNHQSLLGMTHTEAVQILRGVGDALLVLVCDGFD
PKAAAAIEMSPGIIANPFAAGIGRKNSLESISSIDRDLSPEELEILQKEMEMVREATQWE
REEMEKVERLRREREAATQQLEEEAENVPSEPLRLDYRTLAALPSSGLQRGNRTPVVCAE
PGCSMEGDCALLSPPAACHGREASPEPAAAVPGPPQPPAPPQPHTSGAQQPRGDKQDPEG
CPLSQEQLPETPECLIDSQPIPFSENPFVVANRRGKAAGAAGLGGPPLGYGRGGVLKTSP
YSKAPMVESGTGNSRRESPYSSSNPQVPAAPRPPHLAGRETRFASINFTTSQDDSKSTKP
GVIQPLSRVRPSAAPHRAEEGDSPNPFQQPEPCFRIHSSQKPSPLSPPSPDEVPINVKQA
YKTFAAVPLSHPLLGTQELSGQSSTENTKMALEVATHSPGGQHSPEQRSFRERQKYFEIE
VKQQHLDKPPKRVSLVGEDDLKKMKEEEARKLQQQRALLLEEEAEEDEEVRQVPGAVQSS
VIIEGVEYKVERLNGRSIQASAARPLELSESSSSQRNSLEEGIKSEQRTNSMSGLSPAPD
PAAPVRTAKAERRHQERLRMQSPELLSQEKELSPAERRALEAEKRAMWRAARSSALEDSI
KQYEQDLARKLYQSRQWAPAPGASSSPVQSHASRIPGSGGQSRMKSLEQDALKAQMVIAK
SKEGKKRSTLEQLAESPSPAPTPSPTPLEDCSPRNVTSPGRLSMSEKKFDYREFAAIPSS
KPVYEIQSPDAADDLRYVDDRNNSVLREQDGQPEEEETLGTRDPSAPAPSALEDMALYSN
KRKLRHSRRSLETAVPT
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggtttctcctggattgaggagatgggtctccccagcagtgctgctgacactgtcactc
ctgtcacagcctttcttcaggctcctcaacctgcgcaagctgggcctgagcgacaatgag
atccagaggcttccccccgaggtggccaacttcatgcagctggtggagctggacatctcc
cgcaatgacattccagaaattcctgaaagcatcaaattctgcaaatccctggaaatcgca
gacttcagtgggaatcctctctccaggctccctgagggcttcacccagctgcgaagcctg
ggccacctggccctgaacgatgtgtccctgcagagcctccccaccgacattgggaatttg
gcaaacctggtgactttggagctgcgtgagaacctgctaaagactctccccacttcactc
tccttccttgtcaaattagagcagttggatctcggtggcaatgacctggaagtactgccg
gacactctgggcgcgctcccgaacctgcgcgagctctggctggaccggaaccagctctcg
tccctgccaccagagctgggcaacctgcgccgcctggtctgtctggacgtgtctgagaac
aagctggagcacttgcccaacgaggtcagtgggctggtggcactgacggacttgctgctg
tcacagaacctgctggaatgcattccagatgggattggtcagctgaagcagctctccatc
ctcaaggtggaccagaaccggctgacagacatgacagaatcgattggggactgtgaaaat
ctgtcagagctcatcctgactgagaacatgctgacggccttgcccaagtccctgggcaag
ctggccaagctgacgaacctgaacgtggaccggaaccggctgacggcgctgccagcagag
attgggggctgtgccaacctcagtgtcctgtctctgcgggacaaccgcctggccctgctg
cccccagagctggccaacaccaccgagctccacgtcctggatgtggctgggaacaggctg
cagaacttgccctttgctttgacaaatcttaatctgaaagccctgtggctggcagaaaac
cagtcccagcctatgctgaaattccagaccgaggatgatgaaaagacaggagaaaaggtt
cttacttgctacctgctgccccagcagccctctcccagcctggagaacctcctgcagaac
agcgtggatgagagctggacagacaccaacttgaacagagtcagtgtgatccagttcctg
gatgagcctaaaggagatgatgatgaggagtctggagctgaaagacgaggcctgcagcgc
cgagccacccctcaccccagcgagctgaaggtgatgaagaaggtgattgaggtccggcgc
aatgaggtgaacgctgcgaaggctgatgccaaccccaaatctcccaactcggaagagaag
aggctgagtgccacttcaaatcgcagcgaggactctcagctgtccaccagcacggcctct
gtggactgcagggcacaggacagggagcggggctggcccaacgggcagctgccagacggg
cgcgagatggagaaggaggtgaagcccagagcggaagaggagcacaaggaagctgctgac
caggaggaggaagatgtggaagtggaatacaatgagcctactgtacacttcgcggaggac
acgctgatccggagtgaggacgaggatgaggatgaagagcgaccgttcccagtagagaag
cagaggcttatccgcaaggacactccccattataagaaacacttcaagatcactaaactg
cccaagccagaggcagtggtggcacttctgcaggggctgaacagtgatggggtccccaaa
gaggaagaggagttgggaggctgcaataataacacagagcccagggatcaggaggaagct
tgggatgaggatgacagaaagaatggagctttgtctgctcagccatccgtgaagggggtg
tcgtttgatcaagccaataatctgctgattgaacctgctcgcattgaggaggaagagctg
acgctgaccatcgtgcggcagacgggggggctgggcatcagcatcgcggggggcaagggc
tccactccctataagggggatgatgagggcatctttatttcccgtgtgtctgaggagggt
cctgcagctcgtgcaggggtccgtgttggtgacaagcttctggaggtgaacggagtgtcc
ctgcactgtgccgagcaccacgtggccgtggaggcgctgcggggctcggggagctcggtg
tccatgacggtgctgagggagcggatggtggagccggagaacgccatcaccgtcaccccg
ctgcggcccgaggatgactacagcccccgggagcggcgtggggggctgcgcttccccgag
tgccccgagggagcagcggccaccgagaggttttccacctgcctcatgcgcaacgagaag
ggcctcggcttcagcatcgctggtggcaagggctccactccttaccgggctggggacacg
gggatcttcatctcccggatcgcagagggtggtgcagcccaccgggatgggatcctgcac
gtgggagaccgggtcatctcggtgatcccgcgggggctggcgtcacgcagcgggctccgt
gtgggggacaggattctggaggtgaacagcatcgacctgcgccacgccacccaccaggag
gctgtgaacgcgctgctctccaacgctcaggagctcaccatgctggtgcgcagagacccc
ccaccaccgggcatgcaggaaatatgcattgaaaaggctccaggagagaaactgggcatc
agcatccggggaggagccaagggccatgctggcaatccgtttgatcccactgatgaaggc
atcttcatctccaaggtgagctcctccggggccgcagcccgggacggccgcctgaaggtg
gggatgcggatcctggaggtgaaccaccagagcctgctggggatgacgcacacggaggcc
gtgcagatcctgcggggcgtgggggacgcgctcctcgtgctggtctgtgacggcttcgac
cccaaggctgcggctgccatcgagatgtccccaggaatcattgcaaacccttttgctgct
ggcattgggcgcaagaacagcctggagagcatctcctccattgaccgggatttgagcccc
gaggaactggagatcctgcagaaggagatggaaatggtgagagaagccactcagtgggag
agagaagaaatggagaaagtggagcggctgcgtagggagcgggaggcagccacgcagcag
ctggaggaggaagcggagaacgtccccagtgaacccctgcgcctggactaccggaccctg
gcagcgctgcccagcagtggcctgcagagagggaaccgcacccctgttgtgtgcgctgag
cccggctgcagcatggagggtgactgtgcgctgctgtccccgcccgcggcgtgccacggc
cgggaggcgtccccggagccggcggcggccgtccccgggccccctcagccccctgcgcct
ccccagccgcacacgagcggggcacaacagccccggggagacaagcaggaccccgagggg
tgtcccttgtcccaggagcagctgccagagacgccagagtgtttgatcgactcgcagccc
atccccttcagtgagaacccctttgtggtggccaaccgcaggggcaaggccgcgggcgcg
gccggcctgggggggccgcccctgggctacggccgggggggcgtgctgaagaccagcccg
tactccaaggctcctatggtcgagtctgggacaggaaattccaggcgtgaatccccctat
tcttccagtaatccacaggtgcccgcagccccccggccccctcacctggccggcagggag
acgcgctttgcttccattaacttcactacatcacaggatgacagtaaatcaaccaagcct
ggcgtcattcagcctctgtcccgcgtgcgaccaagcgctgcgccgcacagagccgaggag
ggggacagccccaaccccttccagcagcctgagccatgcttcaggatccacagctctcaa
aaaccatcgccactgtcgccaccctcccctgacgaggtccccatcaatgtcaagcaggcc
tacaagaccttcgcagcagtgcccctgtcccacccactgctggggacacaggagctgtct
ggtcagagcagcacagaaaacaccaaaatggccttggaggtggccacgcacagccctggg
ggacagcacagccctgagcaaaggtccttccgtgagaggcagaagtattttgagattgag
gtgaagcagcagcacctggacaagcctcccaagcgtgtgtccttggtgggggaggatgac
ctgaagaagatgaaagaggaggaagcccgcaagctgcagcagcagcgagcccttctgctg
gaggaggaagctgaggaggatgaggaggtgaggcaggtgcctggggctgtgcagtccagc
gtcatcatcgagggcgtcgagtacaaggtggagaggctgaatggaaggagcatccaggct
tcagcagctcggcccttggagctcagtgagagcagcagctcacagaggaattccttggaa
gaggggatcaagtctgagcagagaaccaactccatgtcggggctgagcccggcgccggat
cccgcggctcccgtgcgcacggccaaggccgagcggcggcaccaggagcggctgcggatg
cagagcccggagctgctgagccaggagaaggagctgtccccagcggaacgccgcgctctg
gaggcagagaaacgcgccatgtggagggcagcacgatcctcagctcttgaagacagtatt
aaacagtacgagcaggatctggccaggaagctgtaccagtcccggcagtgggcacctgct
cccggggccagctctagcccagtgcagagtcacgcctcgagaatccctgggtcaggaggc
caatccaggatgaaatcactggaacaggatgctcttaaagcccaaatggttattgccaag
tccaaggaggggaagaaacgcagcacactggagcagctggcagagtcaccttcacctgct
ccgacaccgtctccaacgccgctggaagattgcagccccaggaacgtcacttccccagga
aggctgtcaatgtctgaaaagaagtttgactaccgggaatttgctgccattccttcctcc
aaacccgtttacgaaatccagtcccctgatgcagctgatgacctcagatacgtcgatgac
cggaataactcagttctccgggagcaggatgggcagccagaggaagaggagacgttggga
actcgggatccatcagcaccagctccctcagccctggaggacatggccctgtacagcaac
aagcggaagctccggcacagccggcgcagtttggagaccgctgtccccacatag
DBGET
integrated database retrieval system
