Parus major (Great Tit): 107216272
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Entry
107216272 CDS
T04864
Symbol
LRP6
Name
(RefSeq) low-density lipoprotein receptor-related protein 6 isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
pmaj
Parus major (Great Tit)
Pathway
pmaj04150
mTOR signaling pathway
pmaj04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
107216272 (LRP6)
04150 mTOR signaling pathway
107216272 (LRP6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pmaj04131
]
107216272 (LRP6)
Membrane trafficking [BR:
pmaj04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
107216272 (LRP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
EGF_LRP2
Vgb_lyase
DUF5050
SGL
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
107216272
NCBI-ProteinID:
XP_015508656
Ensembl:
ENSPMJG00000005745
LinkDB
All DBs
Position
1:complement(559143..618166)
Genome browser
AA seq
1342 aa
AA seq
DB search
MDIHAFSQKRQPNATNPCGINNGGCSHLCLMSPTKPSYQCACPTGVKLLENGKTCKDGAT
ALLLLARRTDLRRISLDTPDFTDIVLPLEDIRHAIAIDFDPLEGYIYWTDDEVRAIRRSF
LDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLEEP
RAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRIVLVNTSLGWPNGLALDYAESKIYWGD
AKTDKIEVMNADGTGRRVLVEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKCTAEREII
IDQLPDLMGLKATNVHQIIGTNPCAEDNGGCSHLCLYRPQGLRCACPIGLELISDMKTCI
VPEAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISR
AFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLD
SPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWT
DLDTNLIESSNMLGLDREIIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTI
IQGHLDYVMDILVFHSSRQAGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNSDNRT
CSAPTTFLLFSQKNAINRMVIDEQQSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNI
IRKAQEDGSQSLTVVTSPVPNQNLDMQPYDLSIDIYSRYIYWTCEATNVINVTHLDGRPM
GVVLKGDQDRPRAIVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALA
IDSQLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQMIE
KIDMTGREGRTKVQARIAQLSDIHAVKELNLQEYRQHPCSQDNGGCSHICIVKGDGTTRC
SCPVHLVLLQDELSCGEPPTCSPQQFTCFTGEIDCIPVAWRCDGFTECEDHSDEKNCPVC
SDTQFQCESGQCIDSALRCNGEANCQDNSDEKNCEVLCLTDQFRCASGQCIGKSKKCDHN
LDCSDSSDEQGCYTTEEPAPQPNNTIGSIIGVILTVFVVGAMYFICQRVLCPRMKGDGET
MTNDYVVHGPASVPLGYVPHPSSLSGSLPGMSRGKSVISSLSIMGGSSGPPYDRAHVTGA
SSSSSSSTKGTYFPPILNPPPSPATERSHYTMEFGYSSNSPSTHRSYSYRPYSYRHFAPP
TTPCSTDVCDSDYAPSRRVPAAKGYTSDLNYDSEPVPPPPTPRSQYLSAEENCESCPPSP
YTERSYSHHLYPPPPSPCTDSS
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggatatccatgccttcagccagaagaggcagccaaatgctacaaacccatgtggaatt
aataatggtggctgctcccacttgtgtttgatgtctcctaccaagccctcttatcagtgt
gcatgtcccactggtgtgaaacttcttgagaatggaaagacctgcaaagatggtgccact
gccctgctgctcctggcccgccggacggacttgaggcgcatttccttggacacccctgac
ttcacggacattgtgctgccactggaggacatccgccacgccatcgccattgactttgat
ccactggaaggatacatctactggacagatgacgaagtgagggccatccgccgctccttc
cttgatggctcaggcagccaattcgtggtcaccgctcagattgcacatcccgatggcatc
gctgtggactgggtggcccggaacctgtactggacggacaccggcacggaccgcattgaa
gtcacaaggcttaatgggaccatgaggaaaatcttgatatcagaagacctggaagaaccc
agagctattgtgctggatcccatggttgggtatatgtactggactgactggggagaaatc
ccaaagattgagagggcagcattggatggctcagacagaattgtgctggtgaacacctca
cttggctggccaaatgggttggcactggattatgcagaaagcaaaatatactggggagat
gcaaaaacagacaaaatagaggtcatgaatgctgatggaactggtaggagagtcctggtg
gaggacaagctgcctcatatatttggattcactcttttgggagactacatttactggaca
gactggcaaaggcgcagcattgaacgcgtgcacaagtgcacagcagagagagagatcatc
atcgaccagctgcccgatctgatgggcctgaaagccaccaacgtccaccagatcattggt
acaaacccctgtgcagaagacaatggcggctgcagccacctgtgtctgtaccgaccacaa
ggccttcgctgtgcctgtcccatcggcctggagctcatcagtgacatgaagacctgcatc
gtcccagaggctttcctgctcttttccaggagagcagacattagacgcatctctctagaa
accaacaataacaacgttgctattccactcactggagtcaaggaagcttctgctctggat
tttgatgtgacagacaatcgcatttactggactgacatttcactgaagaccatcagcaga
gcatttatgaatggcagcgccctggaacatgtcgtggagttcggcttggattatcctgaa
ggcatggctgtggactggctggggaagaatttgtactgggctgacactggcacaaaccgg
attgaggtgtccaagctggacgggcagcaccgccaggtgctggtgtggaaagatctcgac
agtccccgggcactggcgctggaccctgctgaagggttcatgtactggactgagtggggt
ggcaagccaaagattgacagagctgctatggatggcagtgagaggaccacgttggtccca
aatgtgggacgtgctaacggcctgaccattgactacgccaagaggcgcctgtactggact
gacctggacaccaacctgatagagtcctccaacatgttaggccttgaccgtgagatcata
gctgatgatttgcctcacccctttggcctgacccagtaccaggattacatttactggaca
gactggagccggcgcagcatcgaacgagccaacaagaccagtggccagaaccgaaccatc
atccaggggcacttggattacgttatggatatcctggtcttccactcctccaggcaggca
ggctggaacgagtgtgcctccagcaatggtcattgctctcacctgtgcctggcagtccct
gtgggagggtttgtctgtggctgcccagctcactattccctgaactctgacaacaggacc
tgcagtgctcctaccacctttctgttgttcagtcagaagaacgcgattaatcgcatggtg
atagacgagcagcagagcccagatatcatactccccatccacagcctccggaatgtccga
gccattgattacgaccctctggataagcagctgtactggatcgactctcggcagaacatc
atccggaaggcacaggaagatggcagccagagcctcactgttgtgacaagtccagttccc
aatcagaacctggatatgcagccctatgacctgagcattgacatctacagccgctacatc
tactggacctgcgaggccaccaacgtcatcaacgtgactcacctagatgggagacccatg
ggagtggtgctcaagggggatcaggataggcccagagccattgtggtgaatccagagaaa
ggatacatgtatttcaccaacctccaggaaagatctcctaaaattgagagagcagcattg
gatggaactgagcgagaagtcctttttttcagtggtttgagcaagcccatagccttagct
attgacagccagctgggcaagttgttctgggctgattcggatctgcgcagaattgaaagc
agtgacctttcaggtgctaaccggattgttttggaagattccaatatcttgcagcctgtg
ggactaactgtatttgagaactggctgtactggattgacaagcagcagcagatgattgaa
aagattgatatgaccggtcgagaaggacgtacaaaggtccaggcccgtattgcacaactc
agtgacatccatgctgtgaaggagctcaacctgcaggaatacagacaacatccgtgctct
caggataatggtggctgctcccacatttgcattgtcaagggggatggcaccacacgctgc
tcttgccctgtgcacctggtgctgctgcaggatgagctgtcctgcggagaaccaccaaca
tgctcccctcagcagttcacctgtttcacaggtgagatcgactgcatcccagtggcctgg
cgctgcgatgggttcactgagtgtgaagaccacagtgatgagaagaactgcccggtgtgc
tctgacacccagttccaatgtgagagtgggcagtgcatcgacagtgccctgcgctgcaat
ggggaagccaattgtcaggacaactcagatgagaagaactgcgaagtgctgtgtttaacg
gatcaattccgctgtgccagtgggcagtgcatcggaaaaagcaagaagtgcgatcacaac
ctggactgcagtgacagctctgatgaacaaggatgctacacaacagaggaacctgcacca
caacccaacaacaccataggttccatcattggtgtgatccttacagtctttgtggtggga
gcaatgtacttcatctgccagagggtgctgtgcccacgcatgaagggggatggggaaacc
atgaccaatgattatgtggtgcacgggccagcctcggtacctctgggctatgtgcctcac
ccaagctctctgtcagggtctctccctggtatgtctcgaggtaaatctgtcatcagctcc
ctcagcattatgggagggagcagtggcccaccctatgacagggcccatgttacaggagcc
tcctctagtagttcttcaagtaccaaaggcacttactttcctccaattttgaacccacca
ccatcaccagctactgaacgttcacactataccatggaatttggttattcttcaaacagc
ccatctactcatagatcctacagctaccggccctacagctaccggcacttcgcgccgccc
acgacgccctgcagcacggacgtgtgcgacagcgactacgccccgagccgccgggtgccc
gcggccaagggctacaccagcgacctcaactacgactcggagccggtgccgccgccgccc
acgccgcgcagccagtacctgtctgccgaggagaactgcgagagctgcccgccgtcccct
tacaccgagcgcagctactcccaccacctgtacccgccgccgccgtccccctgcaccgac
tcctcctga
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