Parus major (Great Tit): 107216302
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Entry
107216302 CDS
T04864
Symbol
ELP1
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
pmaj
Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:
pmaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmaj03016
]
107216302 (ELP1)
Transfer RNA biogenesis [BR:
pmaj03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
107216302 (ELP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
TPR_GEMI5
TPR_IF140-IFT172
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
MlrA_C
Herpes_UL37_2
Motif
Other DBs
NCBI-GeneID:
107216302
NCBI-ProteinID:
XP_015508720
Ensembl:
ENSPMJG00000004844
LinkDB
All DBs
Position
Z:complement(46822980..46856523)
Genome browser
AA seq
1334 aa
AA seq
DB search
MRNLRLLRAGGCRSTAATGTPQCFCLGAEPGVVLVGSQYGLVELRPAGDSVSREVSLTVD
GFLPEDGSGCIVGVEDLPEQESVCVATAAGDILLCNLSTKQVECVGSVDSGLSIMSWSPD
QELVLLATGQQTLIMMTRDFEPITEKQIHQDEFGEGKFVALGWGKKETQFHGSEGKQAAH
RKQTEVLPTSAWDDGRPRVTWRGDGQFVAVSAVCPETGARKVRVWSRELVLQSTSEPISG
LEQALSWKPSGNLIASTQEKPNRHDVVFLEKNGLLHGEFTLPFQKGQVKVNEMLWNADST
VLAIWLEDLKVENSNPNTYVQLWTTGNYHWYLKQSLHFRNLKENQLVSLLWDRENLYRLH
ILCQDWHYLFYDWNWTTDHGLGENSQHMGNVAVIDGDKVLVTAFQHAVVPPPMCTYELHL
QQAVNQIAFHTDPKHSGDMAVLDADNRISVYRYGQSTVNDASVKFGAVGGNGFKAAVETP
YLDKTYRVDVSSSSNEVMNPLGLRFLTWLPDDSFLVVGQGQHAAQSVLHHLTAVPHVAGA
EEECLNLRLSVPVDGEVISLYCSPVTRTVALQLTDRRILKYMWEASTPVLEPWWSSSSSA
VQFPYRCVQISITRISGEEVILGLTDRCRFFVNDVEVASNITSFATYNEFLLVTTNSHTC
QCFCLKNLSVKALQAGLSSAAVPNSETLRKVERGSRIVTVVPLDTKVVLQMPRGNLETIH
HRALVLAQIRKWLDRLMFREAFQCMRKLRINLNLLYDHNPKVFLENTETFIRQIESVNYI
NLFFTELKEEDFTKSMYPSLNGSSNSQPHQHPDQKKVNLICDVMRVAMEHIDPQKYCLSI
LTAHVKKSPPELEIALQKVHDLRESSTPDVQAVSAEEALKYLLFLVDVNELYDYSLGTYD
FDLVVMVAEKSQKDPKEYLPFLNTLRKMETNYQRYTIDRHLKRYTKALGHLCKCGPEHFS
EFLNLVKDQNLYSEALKLYPSSAQEYKDISDAYGEYLIQKQLYEQAALIFARAGIFAKAL
DAFQSSGSWQQALCMASQLGYTKDKQSSLARDMAGKLVEQRKYAEAAILLEQYTQDYEEA
VLLLLEGALWEEALRLIHKYSRLDILETNLKPAILEAQKSQLIFLDSQKTAFLRHKSRLQ
VVRELKGKACENLQDYEVPNCPELELFSETSSVVTASDMNSKYSHSNSRISARSSKNRRK
AERKRYSLKEGSPFEDIALLEVLGESVRAVETVKGEIHILLKQLVLFGYDEQAGALQKVL
EEVLQLMETSVSEIWTSDLQQSSVSLVLGPNSTANSIMAAYQQKRMVPPVVQDPEVLTPP
KFNKNLQWKLHLLQ
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacctgcggctgctgcgggccggtgggtgccgctccaccgccgccacgggcacc
ccgcagtgcttctgcctcggcgccgagcccggcgtggttctcgtgggctcccagtacggg
ctcgtggagctgcgccccgccggggactcggtgtcaagagaagtctccctgactgtggat
gggttcttgcctgaagatggaagtggctgcattgtgggtgtcgaagatcttccagagcag
gagagtgtgtgtgttgctacagcagctggagacatcctactctgcaatctgagcacaaaa
caggtggaatgtgttggaagtgtggacagcggtctgagtatcatgagctggagtcctgac
caagagcttgttttgcttgcaacaggtcagcagacactcatcatgatgacaagggatttt
gagccaattacagagaagcaaatccaccaagatgagtttggagaaggaaagtttgttgct
cttggctggggtaaaaaggagacacagttccatggatcagaaggaaaacaggcagcacat
cgcaaacagacggaggtgttgccgacatcagcctgggatgatggcaggcctcgggtgaca
tggagaggagacgggcagtttgttgcagtgagtgctgtctgtccagagacaggtgctcgg
aaggtccgggtatggagcagagagcttgtgctgcagtccacaagtgagcctatctcggga
ttagaacaagcactgtcatggaagccctcaggaaatctgatagcatctacacaagaaaaa
cccaacagacatgacgtagtttttctggaaaagaatggacttcttcatggagagttcacc
ctccctttccaaaaagggcaggtcaaagttaatgaaatgctttggaatgcagattctaca
gtcctggctatatggctggaagacctgaaggtggaaaactccaacccaaacacttatgtt
cagctgtggaccacagggaactatcattggtacctgaagcaaagtctacactttcgtaac
ttgaaggaaaatcagttggtttcactgctgtgggaccgagagaacttgtacagactacat
atactctgccaggactggcattacctcttctacgactggaattggactacagaccatggg
ctcggggagaatagtcaacatatgggaaatgtggctgttatagatggagataaagtgctt
gtcacagccttccagcatgctgtggtacctccacccatgtgtacctatgagctccacctc
caacaggcagttaatcagattgcatttcacacagatcccaaacatagtggggacatggct
gtcctggatgctgataacaggatctctgtatacagatatgggcagagtacagtgaatgac
gcttctgtcaagtttggagctgtgggaggaaatggctttaaagcagctgtggaaacacca
tacttggataaaacctacagagttgatgtgagcagcagcagcaatgaagtgatgaatcct
ctggggctccgatttctcacctggctgccagatgacagcttcctggttgttggtcaaggt
cagcatgctgctcagtctgtccttcaccatctgactgcagtgcctcacgtggctggagct
gaagaagaatgcctgaacttacggttgtcagtgcctgttgatggagaagtgatcagcctg
tactgcagcccagtgaccagaactgtagctctgcagttgactgatagacggatcctaaaa
tacatgtgggaggcttctactccagtccttgagccctggtggagtagcagtagctctgct
gtgcagttcccctaccgttgtgtgcagatttccatcacgaggatcagcggtgaagaggtg
atcttgggcctcacggatcgatgccggttttttgttaatgatgttgaggttgcttctaac
attacatcatttgcaacatacaatgagtttttgttggtgacaaccaactcacatacctgt
cagtgcttctgcttgaagaacttatcagtgaaggccctccaggctggcctgagcagtgct
gctgtacccaacagtgagaccctgcgcaaggtggagcgaggctcacgtatcgtcactgtt
gttcccctggacacaaaggttgtgctgcagatgccaagaggaaatctggagaccattcac
caccgtgctctggttcttgcccagattcgcaagtggctagacaggctgatgttcagggaa
gcttttcagtgtatgaggaagctgcgaatcaacctcaatcttctctatgaccacaatccc
aaggtatttctggaaaacacagaaacctttatcaggcaaatagagtctgtgaactatatc
aacttgtttttcacggaactgaaagaagaagacttcacaaagagtatgtacccatctctg
aatggtagcagtaacagccagccacaccagcatcctgatcagaaaaaagtaaacctcata
tgtgatgtgatgagagttgccatggaacacattgaccctcaaaaatattgcctatcgata
ctgacagcacatgtaaagaaaagtcctccagaactagaaattgctctccagaaggttcat
gatcttcgagaaagcagcacgccagatgtccaagctgtgagtgcagaagaagcactgaag
tacctgcttttccttgtggatgtcaatgaattgtacgattattccttggggacgtatgac
tttgatttagtcgtcatggtggcagaaaagtctcaaaaggacccaaaagaatacttaccc
ttcttaaatacccttcggaaaatggaaaccaattatcaacgatacacaatagacagacac
ttgaagagatacacgaaagctcttggccacctctgcaaatgtggtcctgagcacttctct
gaatttctgaacttggtgaaggatcagaacctgtattctgaggccttgaagctgtacccc
tccagcgctcaggagtacaaggatatcagtgatgcatatggggagtacctgattcagaag
cagctgtatgaacaggctgcattgatatttgctcgtgctggcatctttgcaaaagcactt
gatgcttttcagagcagtggcagctggcagcaagccctgtgcatggcatcacagcttggt
tacacaaaggataagcagtccagcctggcacgggacatggcaggaaaactagttgaacag
agaaagtacgcagaggcagccatactcctggagcagtacactcaggactatgaggaggct
gttctcctgctcttagaaggggctctttgggaagaggctttgaggctgattcacaagtat
agtagattggatatcttagagaccaacttaaaacctgctattttggaagctcagaagagt
cagctgatcttcctagattcccagaaaacagcatttcttcgccataaaagtcgcctgcaa
gtggtgcgagagctgaaggggaaggcctgtgagaacctgcaggattatgaagtgccaaat
tgcccagaattggagcttttctctgaaaccagcagtgttgtgacagccagtgacatgaac
agcaaatactcacacagcaattcaagaatatcagcgcgatcctcaaagaaccgacgcaag
gcggagcgtaagagatacagcctgaaggaggggagtccttttgaggatattgcccttctg
gaagtcctgggagagagtgttcgtgctgttgagactgtgaaaggagagatacacatcctt
ctgaagcagcttgtgctctttggttatgatgagcaagctggggcactgcagaaagtcctg
gaagaggttttgcagttgatggagacctcagtctcagaaatctggacttcagacctgcaa
cagagctctgtcagcctggtcttgggacccaattcaactgcaaacagcattatggctgcc
tatcagcaaaagaggatggtgcctccagttgtacaagatccagaagtactgactccaccg
aaattcaataaaaatctacagtggaaactgcatcttctccagtaa
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